EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000026856 (Gene tree)
Gene ID: 113009059
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4357 bases
Position: chr17:29872890-29877246
Accession: 113009059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000039835	MRP-S32	PF10210.9	2.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000040777	-	1676	-	ENSACLP00000039835	144 (aa)	XP_026002908	UPI0003298A16

Gene Model

Click here to download ENSACLG00000026856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000026856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000026856	mrpl42	100	80.137	ENSAPOG00000010677	mrpl42	100	80.137	Acanthochromis_polyacanthus
ENSACLG00000026856	mrpl42	100	80.690	ENSAOCG00000011620	mrpl42	100	80.690	Amphiprion_ocellaris
ENSACLG00000026856	mrpl42	100	81.379	ENSAPEG00000019516	mrpl42	100	81.379	Amphiprion_percula
ENSACLG00000026856	mrpl42	90	80.153	ENSATEG00000014106	mrpl42	100	80.153	Anabas_testudineus
ENSACLG00000026856	mrpl42	100	53.793	ENSACAG00000012606	MRPL42	99	53.793	Anolis_carolinensis
ENSACLG00000026856	mrpl42	85	47.287	ENSAMXG00000035149	mrpl42	94	47.287	Astyanax_mexicanus
ENSACLG00000026856	mrpl42	99	65.734	ENSCSEG00000010067	mrpl42	98	65.734	Cynoglossus_semilaevis
ENSACLG00000026856	mrpl42	100	74.483	ENSCVAG00000002612	mrpl42	100	74.483	Cyprinodon_variegatus
ENSACLG00000026856	mrpl42	100	53.793	ENSDARG00000079391	mrpl42	100	53.793	Danio_rerio
ENSACLG00000026856	mrpl42	70	45.370	ENSEBUG00000005581	mrpl42	81	45.370	Eptatretus_burgeri
ENSACLG00000026856	mrpl42	99	61.111	ENSELUG00000001973	mrpl42	99	61.111	Esox_lucius
ENSACLG00000026856	mrpl42	100	73.103	ENSFHEG00000018696	mrpl42	100	73.103	Fundulus_heteroclitus
ENSACLG00000026856	mrpl42	66	78.125	ENSGMOG00000002972	mrpl42	99	78.125	Gadus_morhua
ENSACLG00000026856	mrpl42	100	73.793	ENSGAFG00000018373	mrpl42	100	73.793	Gambusia_affinis
ENSACLG00000026856	mrpl42	67	80.412	ENSGACG00000018811	mrpl42	100	80.412	Gasterosteus_aculeatus
ENSACLG00000026856	mrpl42	100	98.611	ENSHBUG00000015960	mrpl42	100	98.611	Haplochromis_burtoni
ENSACLG00000026856	mrpl42	100	65.753	ENSHCOG00000014046	mrpl42	100	65.753	Hippocampus_comes
ENSACLG00000026856	mrpl42	83	52.419	ENSIPUG00000015395	mrpl42	84	52.419	Ictalurus_punctatus
ENSACLG00000026856	mrpl42	100	68.276	ENSKMAG00000013671	mrpl42	100	68.276	Kryptolebias_marmoratus
ENSACLG00000026856	mrpl42	100	69.655	ENSLBEG00000028618	mrpl42	99	69.655	Labrus_bergylta
ENSACLG00000026856	mrpl42	100	76.552	ENSMAMG00000009737	mrpl42	100	76.552	Mastacembelus_armatus
ENSACLG00000026856	mrpl42	100	100.000	ENSMZEG00005008545	mrpl42	96	100.000	Maylandia_zebra
ENSACLG00000026856	mrpl42	74	73.832	ENSMMOG00000002317	mrpl42	70	73.832	Mola_mola
ENSACLG00000026856	mrpl42	100	67.097	ENSMALG00000015794	mrpl42	96	67.097	Monopterus_albus
ENSACLG00000026856	mrpl42	100	96.528	ENSNBRG00000003307	mrpl42	100	96.528	Neolamprologus_brichardi
ENSACLG00000026856	mrpl42	100	98.611	ENSONIG00000011753	mrpl42	100	98.611	Oreochromis_niloticus
ENSACLG00000026856	mrpl42	93	48.148	ENSOANG00000019984	-	92	48.148	Ornithorhynchus_anatinus
ENSACLG00000026856	mrpl42	100	69.655	ENSORLG00000013500	mrpl42	85	69.655	Oryzias_latipes
ENSACLG00000026856	mrpl42	100	71.724	ENSORLG00020000548	mrpl42	100	71.724	Oryzias_latipes_hni
ENSACLG00000026856	mrpl42	100	70.139	ENSORLG00015016984	mrpl42	100	70.139	Oryzias_latipes_hsok
ENSACLG00000026856	mrpl42	100	71.724	ENSOMEG00000010700	mrpl42	100	71.724	Oryzias_melastigma
ENSACLG00000026856	mrpl42	100	59.459	ENSPKIG00000025457	mrpl42	100	59.459	Paramormyrops_kingsleyae
ENSACLG00000026856	mrpl42	69	75.248	ENSPMGG00000019705	mrpl42	71	75.248	Periophthalmus_magnuspinnatus
ENSACLG00000026856	mrpl42	70	51.429	ENSPMAG00000008091	mrpl42	68	51.429	Petromyzon_marinus
ENSACLG00000026856	mrpl42	100	73.793	ENSPFOG00000016539	mrpl42	99	73.793	Poecilia_formosa
ENSACLG00000026856	mrpl42	100	73.103	ENSPLAG00000001255	mrpl42	100	73.103	Poecilia_latipinna
ENSACLG00000026856	mrpl42	100	73.793	ENSPMEG00000016462	mrpl42	100	73.793	Poecilia_mexicana
ENSACLG00000026856	mrpl42	82	72.269	ENSPREG00000012053	mrpl42	87	72.269	Poecilia_reticulata
ENSACLG00000026856	mrpl42	100	100.000	ENSPNYG00000009586	mrpl42	100	100.000	Pundamilia_nyererei
ENSACLG00000026856	mrpl42	98	52.113	ENSPNAG00000020753	mrpl42	97	52.113	Pygocentrus_nattereri
ENSACLG00000026856	mrpl42	100	76.552	ENSSMAG00000000262	mrpl42	100	76.552	Scophthalmus_maximus
ENSACLG00000026856	mrpl42	100	78.621	ENSSDUG00000005949	mrpl42	100	78.621	Seriola_dumerili
ENSACLG00000026856	mrpl42	100	78.621	ENSSLDG00000010159	mrpl42	100	78.621	Seriola_lalandi_dorsalis
ENSACLG00000026856	mrpl42	100	71.724	ENSTRUG00000025949	mrpl42	99	71.724	Takifugu_rubripes
ENSACLG00000026856	mrpl42	70	59.406	ENSXETG00000032902	mrpl42	82	59.406	Xenopus_tropicalis
ENSACLG00000026856	mrpl42	100	65.753	ENSXCOG00000013875	mrpl42	98	65.753	Xiphophorus_couchianus