EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027006 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: zgc:101559
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 3816 bases
Position: chr16:13292986-13296801
Accession: ZDB-GENE-041114-122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000040070	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000041013	-	711	-	ENSACLP00000040070	236 (aa)	-	-

Gene Model

Click here to download ENSACLG00000027006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027006	zgc:101559	80	44.211	ENSACLG00000000860	-	82	44.211
ENSACLG00000027006	zgc:101559	69	30.539	ENSACLG00000004019	dnajc27	61	30.539
ENSACLG00000027006	zgc:101559	70	30.539	ENSACLG00000017866	nkiras1	85	30.539
ENSACLG00000027006	zgc:101559	78	63.874	ENSACLG00000005720	rab33ba	80	63.874
ENSACLG00000027006	zgc:101559	69	43.558	ENSACLG00000009468	RAB39B	75	43.558
ENSACLG00000027006	zgc:101559	69	39.412	ENSACLG00000024502	-	79	39.412
ENSACLG00000027006	zgc:101559	65	35.669	ENSACLG00000006647	rab9a	77	35.669
ENSACLG00000027006	zgc:101559	80	37.766	ENSACLG00000010268	rab11al	84	37.766
ENSACLG00000027006	zgc:101559	84	36.098	ENSACLG00000018847	RAB7A	96	36.098
ENSACLG00000027006	zgc:101559	58	42.143	ENSACLG00000005093	rab34a	52	42.143
ENSACLG00000027006	zgc:101559	75	47.727	ENSACLG00000013668	rab1ba	83	47.727
ENSACLG00000027006	zgc:101559	73	40.462	ENSACLG00000005446	-	78	40.462
ENSACLG00000027006	zgc:101559	70	40.361	ENSACLG00000015289	rab18b	79	40.361
ENSACLG00000027006	zgc:101559	72	35.503	ENSACLG00000001181	hrasb	93	35.912
ENSACLG00000027006	zgc:101559	50	30.508	ENSACLG00000024991	arl4d	58	30.508
ENSACLG00000027006	zgc:101559	63	38.961	ENSACLG00000008602	RAB29	92	38.961
ENSACLG00000027006	zgc:101559	76	37.989	ENSACLG00000018852	-	80	37.989
ENSACLG00000027006	zgc:101559	72	40.000	ENSACLG00000013505	-	77	40.000
ENSACLG00000027006	zgc:101559	74	37.143	ENSACLG00000025138	rab6ba	82	37.143
ENSACLG00000027006	zgc:101559	72	39.181	ENSACLG00000008615	-	75	39.181
ENSACLG00000027006	zgc:101559	71	42.262	ENSACLG00000019423	rab41	77	42.262
ENSACLG00000027006	zgc:101559	77	46.961	ENSACLG00000013734	-	80	46.961
ENSACLG00000027006	zgc:101559	76	39.665	ENSACLG00000005420	rab11ba	81	39.665
ENSACLG00000027006	zgc:101559	72	40.936	ENSACLG00000018066	rab5aa	77	40.936
ENSACLG00000027006	zgc:101559	69	38.235	ENSACLG00000024456	-	78	38.235
ENSACLG00000027006	zgc:101559	83	36.816	ENSACLG00000021109	si:dkey-13a21.4	94	36.816
ENSACLG00000027006	zgc:101559	78	38.251	ENSACLG00000010251	rab25b	85	38.251
ENSACLG00000027006	zgc:101559	67	36.306	ENSACLG00000027677	KRAS	87	35.294
ENSACLG00000027006	zgc:101559	72	31.579	ENSACLG00000001218	RAB17	73	31.579
ENSACLG00000027006	zgc:101559	75	53.061	ENSACLG00000010965	-	81	53.061
ENSACLG00000027006	zgc:101559	75	31.461	ENSACLG00000011249	rras	88	31.461
ENSACLG00000027006	zgc:101559	79	38.743	ENSACLG00000026336	rab15	87	38.743
ENSACLG00000027006	zgc:101559	77	39.560	ENSACLG00000007696	rab12	73	39.560
ENSACLG00000027006	zgc:101559	70	34.940	ENSACLG00000002819	rab23	71	35.393
ENSACLG00000027006	zgc:101559	76	37.430	ENSACLG00000026487	rab6bb	90	36.413
ENSACLG00000027006	zgc:101559	65	43.871	ENSACLG00000027590	-	72	43.871
ENSACLG00000027006	zgc:101559	94	56.306	ENSACLG00000021547	rab33a	79	56.306
ENSACLG00000027006	zgc:101559	72	40.000	ENSACLG00000006329	-	77	40.000
ENSACLG00000027006	zgc:101559	69	45.122	ENSACLG00000019643	-	80	45.122
ENSACLG00000027006	zgc:101559	68	35.404	ENSACLG00000007804	si:ch73-116o1.2	81	36.416
ENSACLG00000027006	zgc:101559	64	35.714	ENSACLG00000016163	rasl11b	74	33.333
ENSACLG00000027006	zgc:101559	78	44.022	ENSACLG00000018721	si:dkey-16l2.16	86	44.041
ENSACLG00000027006	zgc:101559	67	36.306	ENSACLG00000027515	KRAS	87	35.294
ENSACLG00000027006	zgc:101559	79	38.710	ENSACLG00000001775	rab11a	86	38.710
ENSACLG00000027006	zgc:101559	70	39.157	ENSACLG00000018262	rab25a	77	39.157
ENSACLG00000027006	zgc:101559	75	47.727	ENSACLG00000003326	-	83	47.727
ENSACLG00000027006	zgc:101559	79	38.830	ENSACLG00000007514	rab42a	82	38.830
ENSACLG00000027006	zgc:101559	62	40.816	ENSACLG00000011484	rab18a	71	40.816
ENSACLG00000027006	zgc:101559	75	48.295	ENSACLG00000007644	rab1ab	82	48.295
ENSACLG00000027006	zgc:101559	75	47.753	ENSACLG00000023526	rab30	83	47.753
ENSACLG00000027006	zgc:101559	69	35.714	ENSACLG00000003898	rab32b	76	35.714
ENSACLG00000027006	zgc:101559	72	39.766	ENSACLG00000002706	rab5c	75	39.766
ENSACLG00000027006	zgc:101559	71	41.520	ENSACLG00000021470	rab22a	84	41.520
ENSACLG00000027006	zgc:101559	65	43.871	ENSACLG00000022893	-	72	43.871
ENSACLG00000027006	zgc:101559	68	39.024	ENSACLG00000004795	rab9b	72	39.024
ENSACLG00000027006	zgc:101559	81	32.057	ENSACLG00000019293	rasl11a	81	32.057
ENSACLG00000027006	zgc:101559	73	41.040	ENSACLG00000007076	rab11bb	78	41.040
ENSACLG00000027006	zgc:101559	72	43.023	ENSACLG00000001646	-	79	43.023
ENSACLG00000027006	zgc:101559	62	35.811	ENSACLG00000008646	rheb	79	35.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027006	zgc:101559	98	89.610	ENSAPOG00000007503	zgc:101559	99	89.610	Acanthochromis_polyacanthus
ENSACLG00000027006	zgc:101559	89	95.238	ENSACIG00000021459	zgc:101559	92	95.238	Amphilophus_citrinellus
ENSACLG00000027006	zgc:101559	98	90.043	ENSAOCG00000024675	zgc:101559	99	90.043	Amphiprion_ocellaris
ENSACLG00000027006	zgc:101559	98	90.043	ENSAPEG00000005176	zgc:101559	99	90.043	Amphiprion_percula
ENSACLG00000027006	zgc:101559	98	86.580	ENSATEG00000007761	zgc:101559	99	86.580	Anabas_testudineus
ENSACLG00000027006	zgc:101559	99	74.790	ENSAMXG00000040460	zgc:101559	94	74.790	Astyanax_mexicanus
ENSACLG00000027006	zgc:101559	97	81.304	ENSCSEG00000006243	zgc:101559	98	81.304	Cynoglossus_semilaevis
ENSACLG00000027006	zgc:101559	98	84.848	ENSCVAG00000019227	zgc:101559	99	84.848	Cyprinodon_variegatus
ENSACLG00000027006	zgc:101559	99	76.068	ENSDARG00000003257	zgc:101559	100	76.068	Danio_rerio
ENSACLG00000027006	zgc:101559	98	84.848	ENSFHEG00000011483	zgc:101559	99	84.848	Fundulus_heteroclitus
ENSACLG00000027006	zgc:101559	90	83.099	ENSGMOG00000011665	zgc:101559	100	83.099	Gadus_morhua
ENSACLG00000027006	zgc:101559	99	82.833	ENSGAFG00000021202	zgc:101559	99	82.833	Gambusia_affinis
ENSACLG00000027006	zgc:101559	90	85.915	ENSGACG00000001725	zgc:101559	91	85.915	Gasterosteus_aculeatus
ENSACLG00000027006	zgc:101559	97	99.130	ENSHBUG00000007827	zgc:101559	98	99.130	Haplochromis_burtoni
ENSACLG00000027006	zgc:101559	97	76.957	ENSHCOG00000009133	zgc:101559	97	78.448	Hippocampus_comes
ENSACLG00000027006	zgc:101559	99	69.957	ENSIPUG00000022394	zgc:101559	100	69.957	Ictalurus_punctatus
ENSACLG00000027006	zgc:101559	99	82.479	ENSKMAG00000002862	zgc:101559	99	82.479	Kryptolebias_marmoratus
ENSACLG00000027006	zgc:101559	97	90.000	ENSLBEG00000025798	zgc:101559	98	90.000	Labrus_bergylta
ENSACLG00000027006	zgc:101559	85	68.159	ENSLACG00000011557	zgc:101559	87	68.159	Latimeria_chalumnae
ENSACLG00000027006	zgc:101559	99	70.815	ENSLOCG00000005904	zgc:101559	99	70.815	Lepisosteus_oculatus
ENSACLG00000027006	zgc:101559	97	89.520	ENSMAMG00000017431	zgc:101559	98	89.520	Mastacembelus_armatus
ENSACLG00000027006	zgc:101559	97	99.130	ENSMZEG00005021778	zgc:101559	98	99.130	Maylandia_zebra
ENSACLG00000027006	zgc:101559	97	84.348	ENSMMOG00000019779	zgc:101559	98	84.348	Mola_mola
ENSACLG00000027006	zgc:101559	97	83.478	ENSMALG00000003712	zgc:101559	98	83.478	Monopterus_albus
ENSACLG00000027006	zgc:101559	97	98.261	ENSNBRG00000002684	zgc:101559	98	98.261	Neolamprologus_brichardi
ENSACLG00000027006	zgc:101559	97	99.130	ENSONIG00000006715	-	98	99.130	Oreochromis_niloticus
ENSACLG00000027006	zgc:101559	97	84.211	ENSORLG00000030642	zgc:101559	97	84.211	Oryzias_latipes
ENSACLG00000027006	zgc:101559	97	83.333	ENSORLG00020012685	zgc:101559	97	83.333	Oryzias_latipes_hni
ENSACLG00000027006	zgc:101559	97	83.772	ENSORLG00015016047	zgc:101559	97	83.772	Oryzias_latipes_hsok
ENSACLG00000027006	zgc:101559	97	85.965	ENSOMEG00000013128	zgc:101559	97	85.965	Oryzias_melastigma
ENSACLG00000027006	zgc:101559	92	72.811	ENSPKIG00000013397	zgc:101559	91	72.811	Paramormyrops_kingsleyae
ENSACLG00000027006	zgc:101559	99	84.979	ENSPFOG00000009101	-	99	84.979	Poecilia_formosa
ENSACLG00000027006	zgc:101559	99	84.979	ENSPLAG00000020627	zgc:101559	99	84.979	Poecilia_latipinna
ENSACLG00000027006	zgc:101559	99	84.979	ENSPMEG00000010152	zgc:101559	99	84.979	Poecilia_mexicana
ENSACLG00000027006	zgc:101559	99	84.979	ENSPREG00000007017	zgc:101559	99	84.979	Poecilia_reticulata
ENSACLG00000027006	zgc:101559	97	99.130	ENSPNYG00000012922	zgc:101559	98	99.130	Pundamilia_nyererei
ENSACLG00000027006	zgc:101559	99	76.068	ENSPNAG00000017856	zgc:101559	100	76.068	Pygocentrus_nattereri
ENSACLG00000027006	zgc:101559	98	70.259	ENSSFOG00015006175	zgc:101559	99	70.259	Scleropages_formosus
ENSACLG00000027006	zgc:101559	97	83.043	ENSSMAG00000002229	zgc:101559	97	83.043	Scophthalmus_maximus
ENSACLG00000027006	zgc:101559	97	90.000	ENSSDUG00000008151	zgc:101559	98	90.000	Seriola_dumerili
ENSACLG00000027006	zgc:101559	97	90.000	ENSSLDG00000019214	zgc:101559	98	90.000	Seriola_lalandi_dorsalis
ENSACLG00000027006	zgc:101559	97	91.304	ENSSPAG00000006404	zgc:101559	98	91.304	Stegastes_partitus
ENSACLG00000027006	zgc:101559	97	82.456	ENSTRUG00000009903	zgc:101559	97	82.456	Takifugu_rubripes
ENSACLG00000027006	zgc:101559	92	81.481	ENSTNIG00000015000	zgc:101559	91	81.481	Tetraodon_nigroviridis
ENSACLG00000027006	zgc:101559	99	84.549	ENSXCOG00000018683	zgc:101559	99	84.549	Xiphophorus_couchianus
ENSACLG00000027006	zgc:101559	99	84.549	ENSXMAG00000011171	zgc:101559	99	84.549	Xiphophorus_maculatus