EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000027051 (Gene tree)
Gene ID: 113016515
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 10495 bases
Position: chr23:31667003-31677497
Accession: 113016515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000040142	RNA_ligase	PF09414.10	1.8e-09	1	1
ENSACLP00000040145	RNA_ligase	PF09414.10	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000041085	-	6709	-	ENSACLP00000040142	910 (aa)	XP_026015184	UPI000329B51C
ENSACLT00000041088	-	6453	-	ENSACLP00000040145	910 (aa)	XP_026015184	UPI000329B51C

Gene Model

Click here to download ENSACLG00000027051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027051	lig4	99	66.007	ENSG00000174405	LIG4	99	66.548	Homo_sapiens
ENSACLG00000027051	lig4	99	90.209	ENSAPOG00000000866	lig4	100	90.110	Acanthochromis_polyacanthus
ENSACLG00000027051	lig4	99	64.372	ENSAMEG00000019685	LIG4	99	64.372	Ailuropoda_melanoleuca
ENSACLG00000027051	lig4	100	93.077	ENSACIG00000018309	lig4	100	93.077	Amphilophus_citrinellus
ENSACLG00000027051	lig4	99	90.319	ENSAOCG00000011768	lig4	100	90.220	Amphiprion_ocellaris
ENSACLG00000027051	lig4	100	90.220	ENSAPEG00000017815	lig4	100	90.220	Amphiprion_percula
ENSACLG00000027051	lig4	99	88.106	ENSATEG00000005583	lig4	99	88.106	Anabas_testudineus
ENSACLG00000027051	lig4	96	67.314	ENSAPLG00000001673	LIG4	99	67.314	Anas_platyrhynchos
ENSACLG00000027051	lig4	99	67.660	ENSACAG00000014566	LIG4	99	67.660	Anolis_carolinensis
ENSACLG00000027051	lig4	99	65.567	ENSANAG00000012446	LIG4	99	65.567	Aotus_nancymaae
ENSACLG00000027051	lig4	99	80.769	ENSAMXG00000008192	lig4	94	80.769	Astyanax_mexicanus
ENSACLG00000027051	lig4	99	65.385	ENSBTAG00000015868	LIG4	99	65.385	Bos_taurus
ENSACLG00000027051	lig4	99	65.127	ENSCJAG00000014689	LIG4	99	65.127	Callithrix_jacchus
ENSACLG00000027051	lig4	99	65.055	ENSCAFG00000006031	LIG4	99	65.055	Canis_familiaris
ENSACLG00000027051	lig4	99	65.055	ENSCAFG00020021230	LIG4	99	65.055	Canis_lupus_dingo
ENSACLG00000027051	lig4	99	65.275	ENSCHIG00000001019	LIG4	99	65.275	Capra_hircus
ENSACLG00000027051	lig4	98	65.188	ENSCAPG00000006284	LIG4	99	65.188	Cavia_aperea
ENSACLG00000027051	lig4	99	65.017	ENSCPOG00000014266	LIG4	99	65.017	Cavia_porcellus
ENSACLG00000027051	lig4	99	65.787	ENSCCAG00000019971	LIG4	99	65.787	Cebus_capucinus
ENSACLG00000027051	lig4	98	65.632	ENSCATG00000021075	LIG4	99	65.632	Cercocebus_atys
ENSACLG00000027051	lig4	98	65.854	ENSCLAG00000003376	LIG4	99	65.525	Chinchilla_lanigera
ENSACLG00000027051	lig4	98	65.632	ENSCSAG00000000211	LIG4	99	65.632	Chlorocebus_sabaeus
ENSACLG00000027051	lig4	98	68.667	ENSCPBG00000023291	LIG4	99	68.127	Chrysemys_picta_bellii
ENSACLG00000027051	lig4	69	47.642	ENSCING00000009536	-	97	47.642	Ciona_intestinalis
ENSACLG00000027051	lig4	83	45.000	ENSCSAVG00000010336	-	98	45.000	Ciona_savignyi
ENSACLG00000027051	lig4	98	65.521	ENSCANG00000005805	LIG4	99	65.521	Colobus_angolensis_palliatus
ENSACLG00000027051	lig4	99	65.165	ENSCGRG00001012072	Lig4	99	64.841	Cricetulus_griseus_chok1gshd
ENSACLG00000027051	lig4	99	65.165	ENSCGRG00000013417	Lig4	99	64.841	Cricetulus_griseus_crigri
ENSACLG00000027051	lig4	97	84.893	ENSCSEG00000013905	lig4	96	84.893	Cynoglossus_semilaevis
ENSACLG00000027051	lig4	100	87.377	ENSCVAG00000007896	lig4	100	87.377	Cyprinodon_variegatus
ENSACLG00000027051	lig4	99	80.308	ENSDARG00000060620	lig4	99	80.308	Danio_rerio
ENSACLG00000027051	lig4	99	65.495	ENSDNOG00000000513	LIG4	99	65.495	Dasypus_novemcinctus
ENSACLG00000027051	lig4	98	65.743	ENSDORG00000027303	Lig4	99	65.743	Dipodomys_ordii
ENSACLG00000027051	lig4	93	30.934	FBgn0030506	Lig4	93	30.934	Drosophila_melanogaster
ENSACLG00000027051	lig4	98	63.263	ENSETEG00000015563	LIG4	99	63.485	Echinops_telfairi
ENSACLG00000027051	lig4	99	44.456	ENSEBUG00000014243	lig4	99	44.038	Eptatretus_burgeri
ENSACLG00000027051	lig4	99	65.055	ENSEASG00005022073	LIG4	99	65.055	Equus_asinus_asinus
ENSACLG00000027051	lig4	99	65.275	ENSECAG00000003257	LIG4	99	65.165	Equus_caballus
ENSACLG00000027051	lig4	98	83.315	ENSELUG00000006787	lig4	99	83.426	Esox_lucius
ENSACLG00000027051	lig4	99	64.505	ENSFCAG00000031985	LIG4	99	64.505	Felis_catus
ENSACLG00000027051	lig4	89	68.936	ENSFALG00000004214	LIG4	98	68.936	Ficedula_albicollis
ENSACLG00000027051	lig4	99	64.246	ENSFDAG00000008973	LIG4	99	64.246	Fukomys_damarensis
ENSACLG00000027051	lig4	100	88.145	ENSFHEG00000007398	lig4	90	88.242	Fundulus_heteroclitus
ENSACLG00000027051	lig4	85	77.378	ENSGMOG00000012843	lig4	99	77.677	Gadus_morhua
ENSACLG00000027051	lig4	99	66.081	ENSGALG00000016854	LIG4	99	66.081	Gallus_gallus
ENSACLG00000027051	lig4	99	86.857	ENSGAFG00000019779	lig4	96	87.185	Gambusia_affinis
ENSACLG00000027051	lig4	99	84.309	ENSGACG00000014135	lig4	99	84.309	Gasterosteus_aculeatus
ENSACLG00000027051	lig4	99	65.787	ENSGGOG00000027771	LIG4	99	65.787	Gorilla_gorilla
ENSACLG00000027051	lig4	100	99.780	ENSHBUG00000006245	lig4	100	99.780	Haplochromis_burtoni
ENSACLG00000027051	lig4	99	64.648	ENSHGLG00000000718	LIG4	99	64.648	Heterocephalus_glaber_female
ENSACLG00000027051	lig4	99	64.648	ENSHGLG00100003265	LIG4	99	64.648	Heterocephalus_glaber_male
ENSACLG00000027051	lig4	99	81.229	ENSHCOG00000012010	lig4	99	81.229	Hippocampus_comes
ENSACLG00000027051	lig4	100	78.242	ENSIPUG00000013748	lig4	100	78.242	Ictalurus_punctatus
ENSACLG00000027051	lig4	99	65.237	ENSSTOG00000024303	LIG4	99	64.912	Ictidomys_tridecemlineatus
ENSACLG00000027051	lig4	99	65.203	ENSJJAG00000006750	Lig4	99	64.770	Jaculus_jaculus
ENSACLG00000027051	lig4	99	84.708	ENSKMAG00000001149	lig4	99	84.708	Kryptolebias_marmoratus
ENSACLG00000027051	lig4	91	88.242	ENSLBEG00000014578	lig4	99	88.242	Labrus_bergylta
ENSACLG00000027051	lig4	99	68.386	ENSLACG00000003282	LIG4	99	68.386	Latimeria_chalumnae
ENSACLG00000027051	lig4	99	72.588	ENSLOCG00000008901	lig4	99	72.588	Lepisosteus_oculatus
ENSACLG00000027051	lig4	99	64.325	ENSLAFG00000031152	LIG4	99	64.325	Loxodonta_africana
ENSACLG00000027051	lig4	98	65.632	ENSMFAG00000037235	LIG4	99	65.632	Macaca_fascicularis
ENSACLG00000027051	lig4	98	65.521	ENSMMUG00000008874	LIG4	99	65.521	Macaca_mulatta
ENSACLG00000027051	lig4	98	65.632	ENSMNEG00000023575	LIG4	99	65.632	Macaca_nemestrina
ENSACLG00000027051	lig4	98	65.521	ENSMLEG00000026720	LIG4	99	65.521	Mandrillus_leucophaeus
ENSACLG00000027051	lig4	100	88.242	ENSMAMG00000008472	lig4	99	88.242	Mastacembelus_armatus
ENSACLG00000027051	lig4	100	99.780	ENSMZEG00005001855	lig4	100	99.780	Maylandia_zebra
ENSACLG00000027051	lig4	99	66.081	ENSMGAG00000015532	LIG4	99	66.081	Meleagris_gallopavo
ENSACLG00000027051	lig4	99	63.916	ENSMOCG00000019000	Lig4	99	63.806	Microtus_ochrogaster
ENSACLG00000027051	lig4	100	86.813	ENSMMOG00000004390	lig4	100	86.813	Mola_mola
ENSACLG00000027051	lig4	99	66.923	ENSMODG00000025064	LIG4	99	66.923	Monodelphis_domestica
ENSACLG00000027051	lig4	100	87.253	ENSMALG00000008555	lig4	100	87.253	Monopterus_albus
ENSACLG00000027051	lig4	99	65.127	MGP_CAROLIEiJ_G0030809	Lig4	99	64.912	Mus_caroli
ENSACLG00000027051	lig4	99	64.796	ENSMUSG00000049717	Lig4	99	64.474	Mus_musculus
ENSACLG00000027051	lig4	99	64.686	MGP_PahariEiJ_G0021270	Lig4	99	64.686	Mus_pahari
ENSACLG00000027051	lig4	99	65.017	MGP_SPRETEiJ_G0031917	Lig4	99	64.693	Mus_spretus
ENSACLG00000027051	lig4	99	65.055	ENSMPUG00000018675	LIG4	99	65.055	Mustela_putorius_furo
ENSACLG00000027051	lig4	99	65.275	ENSMLUG00000001267	LIG4	99	65.275	Myotis_lucifugus
ENSACLG00000027051	lig4	99	65.347	ENSNGAG00000013258	Lig4	99	65.237	Nannospalax_galili
ENSACLG00000027051	lig4	100	99.011	ENSNBRG00000021252	lig4	100	99.011	Neolamprologus_brichardi
ENSACLG00000027051	lig4	99	65.457	ENSNLEG00000007888	LIG4	99	65.457	Nomascus_leucogenys
ENSACLG00000027051	lig4	98	64.745	ENSOPRG00000005765	LIG4	99	64.634	Ochotona_princeps
ENSACLG00000027051	lig4	98	64.634	ENSODEG00000019683	LIG4	99	64.634	Octodon_degus
ENSACLG00000027051	lig4	100	97.582	ENSONIG00000011969	lig4	99	97.582	Oreochromis_niloticus
ENSACLG00000027051	lig4	99	65.017	ENSOCUG00000015734	LIG4	99	64.906	Oryctolagus_cuniculus
ENSACLG00000027051	lig4	99	85.291	ENSORLG00000004041	lig4	99	85.291	Oryzias_latipes
ENSACLG00000027051	lig4	99	85.181	ENSORLG00020019607	lig4	99	85.181	Oryzias_latipes_hni
ENSACLG00000027051	lig4	99	85.291	ENSORLG00015017754	lig4	99	85.291	Oryzias_latipes_hsok
ENSACLG00000027051	lig4	75	89.374	ENSOMEG00000003459	lig4	99	89.374	Oryzias_melastigma
ENSACLG00000027051	lig4	99	65.934	ENSOGAG00000032120	LIG4	99	65.934	Otolemur_garnettii
ENSACLG00000027051	lig4	81	69.355	ENSOARG00000005590	LIG4	98	69.355	Ovis_aries
ENSACLG00000027051	lig4	99	65.787	ENSPPAG00000032998	LIG4	99	65.787	Pan_paniscus
ENSACLG00000027051	lig4	99	64.945	ENSPPRG00000017804	LIG4	99	64.945	Panthera_pardus
ENSACLG00000027051	lig4	99	64.835	ENSPTIG00000010051	LIG4	99	64.835	Panthera_tigris_altaica
ENSACLG00000027051	lig4	99	65.897	ENSPTRG00000006025	LIG4	99	65.897	Pan_troglodytes
ENSACLG00000027051	lig4	98	65.743	ENSPANG00000007562	LIG4	99	65.743	Papio_anubis
ENSACLG00000027051	lig4	100	77.936	ENSPKIG00000011645	lig4	99	77.936	Paramormyrops_kingsleyae
ENSACLG00000027051	lig4	99	68.057	ENSPSIG00000001504	LIG4	99	68.057	Pelodiscus_sinensis
ENSACLG00000027051	lig4	98	81.187	ENSPMGG00000013486	lig4	99	80.418	Periophthalmus_magnuspinnatus
ENSACLG00000027051	lig4	99	64.505	ENSPEMG00000000076	Lig4	99	64.505	Peromyscus_maniculatus_bairdii
ENSACLG00000027051	lig4	99	65.824	ENSPCIG00000021882	LIG4	99	65.824	Phascolarctos_cinereus
ENSACLG00000027051	lig4	100	87.500	ENSPFOG00000000797	lig4	99	87.925	Poecilia_formosa
ENSACLG00000027051	lig4	100	87.390	ENSPLAG00000001196	lig4	99	87.816	Poecilia_latipinna
ENSACLG00000027051	lig4	100	87.500	ENSPMEG00000021353	lig4	99	87.925	Poecilia_mexicana
ENSACLG00000027051	lig4	100	87.061	ENSPREG00000007323	lig4	100	87.390	Poecilia_reticulata
ENSACLG00000027051	lig4	99	65.237	ENSPPYG00000005540	LIG4	99	65.237	Pongo_abelii
ENSACLG00000027051	lig4	99	64.673	ENSPVAG00000016403	LIG4	99	64.349	Pteropus_vampyrus
ENSACLG00000027051	lig4	100	99.670	ENSPNYG00000009660	lig4	100	99.670	Pundamilia_nyererei
ENSACLG00000027051	lig4	99	81.036	ENSPNAG00000028056	lig4	99	81.036	Pygocentrus_nattereri
ENSACLG00000027051	lig4	99	81.036	ENSPNAG00000028069	LIG4	99	81.036	Pygocentrus_nattereri
ENSACLG00000027051	lig4	99	64.686	ENSRNOG00000014605	Lig4	99	64.576	Rattus_norvegicus
ENSACLG00000027051	lig4	98	64.856	ENSRBIG00000039962	LIG4	99	64.856	Rhinopithecus_bieti
ENSACLG00000027051	lig4	98	65.521	ENSRROG00000006040	LIG4	99	65.521	Rhinopithecus_roxellana
ENSACLG00000027051	lig4	99	65.237	ENSSBOG00000019029	LIG4	99	65.237	Saimiri_boliviensis_boliviensis
ENSACLG00000027051	lig4	99	63.736	ENSSHAG00000009525	LIG4	99	63.527	Sarcophilus_harrisii
ENSACLG00000027051	lig4	100	79.011	ENSSFOG00015012835	lig4	100	79.011	Scleropages_formosus
ENSACLG00000027051	lig4	100	83.407	ENSSMAG00000011267	lig4	100	83.407	Scophthalmus_maximus
ENSACLG00000027051	lig4	100	87.527	ENSSDUG00000010343	lig4	99	87.842	Seriola_dumerili
ENSACLG00000027051	lig4	100	86.543	ENSSLDG00000003239	lig4	99	86.637	Seriola_lalandi_dorsalis
ENSACLG00000027051	lig4	98	63.536	ENSSARG00000006573	LIG4	99	63.536	Sorex_araneus
ENSACLG00000027051	lig4	92	69.249	ENSSPUG00000002444	LIG4	99	69.249	Sphenodon_punctatus
ENSACLG00000027051	lig4	99	90.209	ENSSPAG00000001609	lig4	99	90.209	Stegastes_partitus
ENSACLG00000027051	lig4	99	65.160	ENSSSCG00000009540	LIG4	99	65.160	Sus_scrofa
ENSACLG00000027051	lig4	99	66.741	ENSTGUG00000010795	LIG4	99	66.741	Taeniopygia_guttata
ENSACLG00000027051	lig4	99	84.488	ENSTRUG00000009984	lig4	99	84.488	Takifugu_rubripes
ENSACLG00000027051	lig4	99	82.398	ENSTNIG00000010348	lig4	99	82.618	Tetraodon_nigroviridis
ENSACLG00000027051	lig4	99	65.677	ENSTBEG00000017741	LIG4	99	65.677	Tupaia_belangeri
ENSACLG00000027051	lig4	99	65.017	ENSTTRG00000012660	LIG4	99	65.017	Tursiops_truncatus
ENSACLG00000027051	lig4	99	64.452	ENSUAMG00000003773	LIG4	99	64.452	Ursus_americanus
ENSACLG00000027051	lig4	99	67.179	ENSXETG00000002654	lig4	99	67.179	Xenopus_tropicalis
ENSACLG00000027051	lig4	100	87.061	ENSXCOG00000017401	lig4	99	87.486	Xiphophorus_couchianus
ENSACLG00000027051	lig4	100	87.281	ENSXMAG00000015142	lig4	99	87.706	Xiphophorus_maculatus