EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027166 (Gene tree)
Gene ID: 113011703
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 7344 bases
Position: chr19:14539720-14547063
Accession: 113011703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000040317	RRM_1	PF00076.22	3.9e-33	1	2
ENSACLP00000040317	RRM_1	PF00076.22	3.9e-33	2	2
ENSACLP00000040317	RRM_3	PF08777.11	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000041266	-	3420	-	ENSACLP00000040317	296 (aa)	XP_026007161	UPI000E418AB9

Gene Model

Click here to download ENSACLG00000027166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027166	srsf5a	90	58.511	ENSACLG00000026424	srsf5b	63	70.000
ENSACLG00000027166	srsf5a	61	41.176	ENSACLG00000015678	srsf9	65	42.246
ENSACLG00000027166	srsf5a	63	64.706	ENSACLG00000021269	-	50	63.102
ENSACLG00000027166	srsf5a	60	41.304	ENSACLG00000005676	-	66	42.391
ENSACLG00000027166	srsf5a	60	47.826	ENSACLG00000021693	-	66	47.283
ENSACLG00000027166	srsf5a	95	54.545	ENSACLG00000003395	srsf4	58	75.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027166	srsf5a	100	87.789	ENSAPOG00000017395	srsf5a	78	92.050	Acanthochromis_polyacanthus
ENSACLG00000027166	srsf5a	91	81.985	ENSACIG00000011892	srsf5a	96	94.203	Amphilophus_citrinellus
ENSACLG00000027166	srsf5a	81	86.831	ENSAOCG00000014967	srsf5a	80	90.535	Amphiprion_ocellaris
ENSACLG00000027166	srsf5a	81	86.831	ENSAPEG00000009297	srsf5a	80	90.535	Amphiprion_percula
ENSACLG00000027166	srsf5a	91	91.450	ENSATEG00000000198	srsf5a	82	93.724	Anabas_testudineus
ENSACLG00000027166	srsf5a	65	73.575	ENSAPLG00000002469	-	70	72.539	Anas_platyrhynchos
ENSACLG00000027166	srsf5a	65	74.869	ENSACAG00000029015	-	68	73.438	Anolis_carolinensis
ENSACLG00000027166	srsf5a	65	84.264	ENSAMXG00000030476	srsf5a	67	83.246	Astyanax_mexicanus
ENSACLG00000027166	srsf5a	65	76.562	ENSCPBG00000021518	-	70	75.000	Chrysemys_picta_bellii
ENSACLG00000027166	srsf5a	65	57.653	ENSCSAVG00000011376	-	78	58.163	Ciona_savignyi
ENSACLG00000027166	srsf5a	81	93.827	ENSCSEG00000008109	srsf5a	77	93.776	Cynoglossus_semilaevis
ENSACLG00000027166	srsf5a	80	84.774	ENSCVAG00000016982	srsf5a	96	84.962	Cyprinodon_variegatus
ENSACLG00000027166	srsf5a	84	71.429	ENSDARG00000029818	srsf5a	100	80.714	Danio_rerio
ENSACLG00000027166	srsf5a	65	75.610	ENSELUG00000020439	srsf5a	62	80.711	Esox_lucius
ENSACLG00000027166	srsf5a	65	73.298	ENSFALG00000005098	-	64	72.775	Ficedula_albicollis
ENSACLG00000027166	srsf5a	82	82.171	ENSFHEG00000003955	srsf5a	97	78.621	Fundulus_heteroclitus
ENSACLG00000027166	srsf5a	65	84.293	ENSGMOG00000000869	srsf5a	94	84.293	Gadus_morhua
ENSACLG00000027166	srsf5a	65	72.775	ENSGALG00000033259	SRSF5A	63	71.728	Gallus_gallus
ENSACLG00000027166	srsf5a	82	72.112	ENSGAFG00000018237	srsf5a	78	61.303	Gambusia_affinis
ENSACLG00000027166	srsf5a	65	76.562	ENSGAGG00000007312	-	70	75.000	Gopherus_agassizii
ENSACLG00000027166	srsf5a	100	99.324	ENSHBUG00000014048	srsf5a	100	99.324	Haplochromis_burtoni
ENSACLG00000027166	srsf5a	65	87.958	ENSHCOG00000017557	srsf5a	62	87.435	Hippocampus_comes
ENSACLG00000027166	srsf5a	65	86.911	ENSIPUG00000003439	srsf5a	69	84.817	Ictalurus_punctatus
ENSACLG00000027166	srsf5a	86	78.277	ENSKMAG00000014937	srsf5a	71	83.264	Kryptolebias_marmoratus
ENSACLG00000027166	srsf5a	65	92.821	ENSLBEG00000017153	srsf5a	74	93.333	Labrus_bergylta
ENSACLG00000027166	srsf5a	65	80.628	ENSLACG00000017874	-	70	80.105	Latimeria_chalumnae
ENSACLG00000027166	srsf5a	65	81.218	ENSLOCG00000014075	srsf5a	61	82.723	Lepisosteus_oculatus
ENSACLG00000027166	srsf5a	100	86.486	ENSMAMG00000000192	srsf5a	82	87.029	Mastacembelus_armatus
ENSACLG00000027166	srsf5a	100	99.662	ENSMZEG00005010485	srsf5a	100	99.662	Maylandia_zebra
ENSACLG00000027166	srsf5a	73	70.642	ENSMGAG00000011888	-	96	71.676	Meleagris_gallopavo
ENSACLG00000027166	srsf5a	100	87.541	ENSMMOG00000009793	srsf5a	78	90.795	Mola_mola
ENSACLG00000027166	srsf5a	100	80.743	ENSMALG00000021194	srsf5a	79	80.335	Monopterus_albus
ENSACLG00000027166	srsf5a	100	99.324	ENSNBRG00000000771	srsf5a	100	99.324	Neolamprologus_brichardi
ENSACLG00000027166	srsf5a	100	99.324	ENSONIG00000019583	srsf5a	100	99.324	Oreochromis_niloticus
ENSACLG00000027166	srsf5a	80	86.192	ENSORLG00000009268	srsf5a	83	84.519	Oryzias_latipes
ENSACLG00000027166	srsf5a	80	86.192	ENSORLG00020003281	srsf5	83	84.519	Oryzias_latipes_hni
ENSACLG00000027166	srsf5a	80	86.192	ENSORLG00015023075	srsf5	83	84.519	Oryzias_latipes_hsok
ENSACLG00000027166	srsf5a	80	85.294	ENSOMEG00000000628	srsf5a	83	84.519	Oryzias_melastigma
ENSACLG00000027166	srsf5a	65	85.340	ENSPKIG00000002054	srsf5a	68	82.199	Paramormyrops_kingsleyae
ENSACLG00000027166	srsf5a	65	76.042	ENSPSIG00000008238	-	69	72.917	Pelodiscus_sinensis
ENSACLG00000027166	srsf5a	82	66.403	ENSPMGG00000020125	srsf5a	55	79.581	Periophthalmus_magnuspinnatus
ENSACLG00000027166	srsf5a	82	83.137	ENSPFOG00000022993	srsf5a	78	82.731	Poecilia_formosa
ENSACLG00000027166	srsf5a	82	83.071	ENSPLAG00000005508	srsf5a	77	82.661	Poecilia_latipinna
ENSACLG00000027166	srsf5a	82	83.529	ENSPMEG00000016339	srsf5a	78	83.133	Poecilia_mexicana
ENSACLG00000027166	srsf5a	82	83.984	ENSPREG00000018091	srsf5a	79	83.200	Poecilia_reticulata
ENSACLG00000027166	srsf5a	100	99.662	ENSPNYG00000021245	srsf5a	100	99.662	Pundamilia_nyererei
ENSACLG00000027166	srsf5a	65	81.313	ENSSFOG00015008377	srsf5	66	82.723	Scleropages_formosus
ENSACLG00000027166	srsf5a	100	82.903	ENSSMAG00000010899	srsf5a	83	88.538	Scophthalmus_maximus
ENSACLG00000027166	srsf5a	91	86.716	ENSSDUG00000006103	srsf5a	80	90.795	Seriola_dumerili
ENSACLG00000027166	srsf5a	100	86.957	ENSSLDG00000004146	srsf5a	79	91.213	Seriola_lalandi_dorsalis
ENSACLG00000027166	srsf5a	65	72.396	ENSSPUG00000002052	-	68	71.354	Sphenodon_punctatus
ENSACLG00000027166	srsf5a	81	90.795	ENSSPAG00000002821	srsf5a	80	91.213	Stegastes_partitus
ENSACLG00000027166	srsf5a	65	73.822	ENSTGUG00000011492	-	68	71.204	Taeniopygia_guttata
ENSACLG00000027166	srsf5a	100	91.582	ENSTRUG00000022908	srsf5a	81	93.333	Takifugu_rubripes
ENSACLG00000027166	srsf5a	99	62.542	ENSXETG00000017937	srsf5a	72	78.125	Xenopus_tropicalis
ENSACLG00000027166	srsf5a	82	82.869	ENSXCOG00000015338	srsf5a	78	83.673	Xiphophorus_couchianus
ENSACLG00000027166	srsf5a	82	83.529	ENSXMAG00000012823	srsf5a	61	89.119	Xiphophorus_maculatus