EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027304 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 4008 bases
Position: chr16:13740796-13744803
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000040527	RVT_1	PF00078.27	2.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000041482	-	4008	-	ENSACLP00000040527	1335 (aa)	-	-

Gene Model

Click here to download ENSACLG00000027304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027304	-	79	33.024	ENSACLG00000005909	-	95	33.024
ENSACLG00000027304	-	51	30.224	ENSACLG00000020048	-	54	30.224
ENSACLG00000027304	-	80	43.370	ENSACLG00000008642	-	99	43.370
ENSACLG00000027304	-	53	35.697	ENSACLG00000026879	-	51	35.697
ENSACLG00000027304	-	81	36.224	ENSACLG00000025600	-	96	36.166
ENSACLG00000027304	-	98	36.960	ENSACLG00000014671	-	97	36.960
ENSACLG00000027304	-	53	33.906	ENSACLG00000010542	-	57	33.906
ENSACLG00000027304	-	55	32.842	ENSACLG00000023206	-	92	32.842
ENSACLG00000027304	-	97	30.342	ENSACLG00000002243	-	95	30.385
ENSACLG00000027304	-	57	59.818	ENSACLG00000010161	-	93	59.818
ENSACLG00000027304	-	99	37.959	ENSACLG00000017755	-	98	37.959
ENSACLG00000027304	-	83	37.195	ENSACLG00000018225	-	95	37.195
ENSACLG00000027304	-	67	39.912	ENSACLG00000022170	-	95	39.912
ENSACLG00000027304	-	78	40.226	ENSACLG00000004561	-	99	40.226
ENSACLG00000027304	-	76	39.072	ENSACLG00000017062	-	98	39.072
ENSACLG00000027304	-	99	36.760	ENSACLG00000002701	-	98	36.760
ENSACLG00000027304	-	50	33.971	ENSACLG00000027124	-	90	33.971
ENSACLG00000027304	-	56	42.358	ENSACLG00000013905	-	96	42.358
ENSACLG00000027304	-	99	36.990	ENSACLG00000007417	-	98	36.990
ENSACLG00000027304	-	95	37.211	ENSACLG00000015817	-	97	37.246
ENSACLG00000027304	-	94	37.829	ENSACLG00000014813	-	94	37.829
ENSACLG00000027304	-	99	36.982	ENSACLG00000013242	-	98	36.982
ENSACLG00000027304	-	99	37.278	ENSACLG00000024627	-	97	37.278
ENSACLG00000027304	-	79	38.404	ENSACLG00000005337	-	100	38.404
ENSACLG00000027304	-	61	34.143	ENSACLG00000004748	-	94	33.884
ENSACLG00000027304	-	79	39.612	ENSACLG00000007713	-	92	39.612
ENSACLG00000027304	-	66	43.681	ENSACLG00000017452	-	98	43.681
ENSACLG00000027304	-	85	31.378	ENSACLG00000002238	-	94	31.378
ENSACLG00000027304	-	60	43.489	ENSACLG00000027702	-	95	43.489
ENSACLG00000027304	-	84	30.009	ENSACLG00000027633	-	97	30.009
ENSACLG00000027304	-	51	31.263	ENSACLG00000013455	-	50	31.263
ENSACLG00000027304	-	51	31.798	ENSACLG00000002180	-	52	31.798
ENSACLG00000027304	-	63	99.645	ENSACLG00000011588	-	100	99.645
ENSACLG00000027304	-	98	42.804	ENSACLG00000016676	-	99	42.804
ENSACLG00000027304	-	99	31.205	ENSACLG00000016675	-	99	31.205
ENSACLG00000027304	-	98	36.811	ENSACLG00000008224	-	97	36.811
ENSACLG00000027304	-	95	37.318	ENSACLG00000026192	-	98	37.318
ENSACLG00000027304	-	51	31.470	ENSACLG00000003361	-	50	31.470

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027304	-	53	42.098	ENSAPOG00000004355	-	99	40.741	Acanthochromis_polyacanthus
ENSACLG00000027304	-	92	37.660	ENSAOCG00000013724	-	98	37.719	Amphiprion_ocellaris
ENSACLG00000027304	-	99	60.599	ENSAPEG00000000825	-	99	60.599	Amphiprion_percula
ENSACLG00000027304	-	63	63.571	ENSAPEG00000008014	-	99	63.571	Amphiprion_percula
ENSACLG00000027304	-	99	37.343	ENSAMXG00000042050	-	99	37.343	Astyanax_mexicanus
ENSACLG00000027304	-	59	42.250	ENSFHEG00000022775	-	99	42.893	Fundulus_heteroclitus
ENSACLG00000027304	-	99	37.130	ENSMZEG00005020286	-	97	37.130	Maylandia_zebra
ENSACLG00000027304	-	99	60.434	ENSMZEG00005002230	-	99	60.434	Maylandia_zebra
ENSACLG00000027304	-	80	39.282	ENSORLG00000029496	-	90	39.282	Oryzias_latipes
ENSACLG00000027304	-	98	37.389	ENSORLG00000022997	-	99	37.389	Oryzias_latipes
ENSACLG00000027304	-	99	36.974	ENSORLG00000027860	-	97	36.974	Oryzias_latipes
ENSACLG00000027304	-	96	37.318	ENSORLG00000022133	-	96	37.471	Oryzias_latipes
ENSACLG00000027304	-	96	37.538	ENSORLG00000025897	-	96	37.538	Oryzias_latipes
ENSACLG00000027304	-	83	38.831	ENSORLG00000026148	-	94	38.831	Oryzias_latipes
ENSACLG00000027304	-	76	60.467	ENSORLG00020004022	-	98	60.467	Oryzias_latipes_hni
ENSACLG00000027304	-	60	44.118	ENSORLG00020004971	-	93	44.118	Oryzias_latipes_hni
ENSACLG00000027304	-	99	58.832	ENSORLG00015013406	-	99	58.832	Oryzias_latipes_hsok
ENSACLG00000027304	-	95	36.587	ENSOMEG00000002638	-	97	36.587	Oryzias_melastigma
ENSACLG00000027304	-	95	36.636	ENSOMEG00000015506	-	97	36.790	Oryzias_melastigma
ENSACLG00000027304	-	57	62.745	ENSPKIG00000025483	-	100	62.745	Paramormyrops_kingsleyae
ENSACLG00000027304	-	98	37.056	ENSPREG00000013866	-	97	37.056	Poecilia_reticulata
ENSACLG00000027304	-	98	36.913	ENSXMAG00000026471	-	96	36.913	Xiphophorus_maculatus
ENSACLG00000027304	-	75	39.497	ENSXMAG00000023070	-	89	39.497	Xiphophorus_maculatus