EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027552 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 2016 bases
Position: chr23:34649774-34651789
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000040912	FDF	PF09532.10	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000041872	-	876	-	ENSACLP00000040912	291 (aa)	-	-

Gene Model

Click here to download ENSACLG00000027552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027552	-	66	91.623	ENSACLG00000019624	-	65	91.623
ENSACLG00000027552	-	59	79.532	ENSACLG00000008384	-	56	84.795
ENSACLG00000027552	-	66	87.435	ENSACLG00000011955	-	64	87.435
ENSACLG00000027552	-	97	91.438	ENSACLG00000013004	-	100	90.411

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027552	-	71	37.339	ENSCAPG00000013059	LSM14B	81	38.189	Cavia_aperea
ENSACLG00000027552	-	71	37.768	ENSCPOG00000038080	LSM14B	81	38.583	Cavia_porcellus
ENSACLG00000027552	-	56	42.197	ENSCGRG00000002484	-	94	41.827	Cricetulus_griseus_crigri
ENSACLG00000027552	-	52	47.059	ENSDNOG00000025246	LSM14B	62	47.090	Dasypus_novemcinctus
ENSACLG00000027552	-	53	49.390	ENSEASG00005023218	LSM14B	65	49.682	Equus_asinus_asinus
ENSACLG00000027552	-	56	59.036	ENSGAFG00000013723	LSM14B	76	59.036	Gambusia_affinis
ENSACLG00000027552	-	52	61.438	ENSKMAG00000012834	-	69	62.264	Kryptolebias_marmoratus
ENSACLG00000027552	-	100	97.595	ENSMZEG00005009676	-	100	97.595	Maylandia_zebra
ENSACLG00000027552	-	59	81.287	ENSMZEG00005026087	-	63	79.058	Maylandia_zebra
ENSACLG00000027552	-	59	85.380	ENSMZEG00005002688	-	57	85.965	Maylandia_zebra
ENSACLG00000027552	-	54	42.162	ENSOCUG00000006279	LSM14B	58	46.040	Oryctolagus_cuniculus
ENSACLG00000027552	-	52	47.500	ENSPSIG00000014762	LSM14B	61	47.120	Pelodiscus_sinensis
ENSACLG00000027552	-	54	47.826	ENSPNAG00000012777	lsm14b	63	41.518	Pygocentrus_nattereri
ENSACLG00000027552	-	52	48.447	ENSTGUG00000007884	LSM14B	51	48.333	Taeniopygia_guttata
ENSACLG00000027552	-	70	35.814	ENSUAMG00000025298	LSM14B	56	36.864	Ursus_americanus
ENSACLG00000027552	-	70	35.814	ENSUMAG00000000480	LSM14B	56	36.864	Ursus_maritimus