EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000027742 (Gene tree)
Gene ID: 113025524
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 4822 bases
Position: chr7:16196453-16201274
Accession: 113025524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000041209	MRP-S27	PF10037.9	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000042178	-	3509	-	ENSACLP00000041209	388 (aa)	XP_026029152	UPI000E428D9F

Gene Model

Click here to download ENSACLG00000027742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027742	ptcd2	95	42.216	ENSG00000049883	PTCD2	98	42.216	Homo_sapiens
ENSACLG00000027742	ptcd2	98	79.790	ENSAPOG00000020682	ptcd2	100	79.790	Acanthochromis_polyacanthus
ENSACLG00000027742	ptcd2	89	45.845	ENSAMEG00000007194	PTCD2	90	45.845	Ailuropoda_melanoleuca
ENSACLG00000027742	ptcd2	89	80.460	ENSACIG00000002053	ptcd2	100	80.460	Amphilophus_citrinellus
ENSACLG00000027742	ptcd2	100	81.443	ENSAOCG00000006616	ptcd2	100	81.443	Amphiprion_ocellaris
ENSACLG00000027742	ptcd2	100	81.186	ENSAPEG00000022926	ptcd2	100	81.186	Amphiprion_percula
ENSACLG00000027742	ptcd2	100	46.056	ENSACAG00000009747	PTCD2	100	46.056	Anolis_carolinensis
ENSACLG00000027742	ptcd2	94	42.706	ENSANAG00000029353	PTCD2	97	42.706	Aotus_nancymaae
ENSACLG00000027742	ptcd2	92	51.105	ENSAMXG00000029404	ptcd2	96	51.105	Astyanax_mexicanus
ENSACLG00000027742	ptcd2	91	44.598	ENSBTAG00000014675	PTCD2	94	44.598	Bos_taurus
ENSACLG00000027742	ptcd2	94	41.645	ENSCJAG00000016364	PTCD2	97	41.645	Callithrix_jacchus
ENSACLG00000027742	ptcd2	99	46.667	ENSCAFG00000007982	PTCD2	91	46.667	Canis_familiaris
ENSACLG00000027742	ptcd2	89	48.703	ENSCAFG00020019147	PTCD2	97	48.703	Canis_lupus_dingo
ENSACLG00000027742	ptcd2	91	44.321	ENSCHIG00000017118	PTCD2	94	44.321	Capra_hircus
ENSACLG00000027742	ptcd2	91	43.490	ENSCPOG00000040168	PTCD2	94	43.490	Cavia_porcellus
ENSACLG00000027742	ptcd2	94	42.706	ENSCCAG00000029389	-	97	42.706	Cebus_capucinus
ENSACLG00000027742	ptcd2	75	42.715	ENSCCAG00000021996	-	93	42.715	Cebus_capucinus
ENSACLG00000027742	ptcd2	96	44.652	ENSCATG00000019069	PTCD2	98	44.652	Cercocebus_atys
ENSACLG00000027742	ptcd2	91	44.044	ENSCLAG00000000072	PTCD2	94	44.044	Chinchilla_lanigera
ENSACLG00000027742	ptcd2	89	45.115	ENSCSAG00000015623	PTCD2	98	44.118	Chlorocebus_sabaeus
ENSACLG00000027742	ptcd2	71	50.588	ENSCHOG00000010634	PTCD2	79	50.588	Choloepus_hoffmanni
ENSACLG00000027742	ptcd2	89	46.110	ENSCPBG00000000216	PTCD2	89	46.110	Chrysemys_picta_bellii
ENSACLG00000027742	ptcd2	96	44.533	ENSCANG00000035636	PTCD2	96	44.533	Colobus_angolensis_palliatus
ENSACLG00000027742	ptcd2	95	46.237	ENSCGRG00001015289	Ptcd2	81	46.237	Cricetulus_griseus_chok1gshd
ENSACLG00000027742	ptcd2	95	46.237	ENSCGRG00000006193	Ptcd2	81	46.237	Cricetulus_griseus_crigri
ENSACLG00000027742	ptcd2	100	76.410	ENSCVAG00000001285	ptcd2	100	76.410	Cyprinodon_variegatus
ENSACLG00000027742	ptcd2	98	51.958	ENSDARG00000035391	ptcd2	100	51.958	Danio_rerio
ENSACLG00000027742	ptcd2	89	44.957	ENSDNOG00000008719	PTCD2	91	44.957	Dasypus_novemcinctus
ENSACLG00000027742	ptcd2	96	44.180	ENSDORG00000004921	Ptcd2	98	44.180	Dipodomys_ordii
ENSACLG00000027742	ptcd2	96	42.359	ENSETEG00000016542	PTCD2	95	42.359	Echinops_telfairi
ENSACLG00000027742	ptcd2	90	45.584	ENSEASG00005018038	PTCD2	92	45.584	Equus_asinus_asinus
ENSACLG00000027742	ptcd2	90	45.584	ENSECAG00000007022	PTCD2	90	45.584	Equus_caballus
ENSACLG00000027742	ptcd2	93	45.355	ENSEEUG00000014031	PTCD2	94	45.355	Erinaceus_europaeus
ENSACLG00000027742	ptcd2	98	61.619	ENSELUG00000003584	ptcd2	100	61.619	Esox_lucius
ENSACLG00000027742	ptcd2	81	47.785	ENSFCAG00000045432	PTCD2	74	47.785	Felis_catus
ENSACLG00000027742	ptcd2	84	44.648	ENSFALG00000010299	PTCD2	99	44.648	Ficedula_albicollis
ENSACLG00000027742	ptcd2	92	42.623	ENSFDAG00000018461	PTCD2	96	42.623	Fukomys_damarensis
ENSACLG00000027742	ptcd2	98	62.924	ENSGMOG00000003637	ptcd2	99	62.924	Gadus_morhua
ENSACLG00000027742	ptcd2	91	44.633	ENSGALG00000038260	PTCD2	92	44.633	Gallus_gallus
ENSACLG00000027742	ptcd2	89	49.568	ENSGAGG00000021952	PTCD2	89	49.568	Gopherus_agassizii
ENSACLG00000027742	ptcd2	95	42.216	ENSGGOG00000010695	PTCD2	98	42.216	Gorilla_gorilla
ENSACLG00000027742	ptcd2	100	98.969	ENSHBUG00000009191	ptcd2	100	98.969	Haplochromis_burtoni
ENSACLG00000027742	ptcd2	89	45.115	ENSHGLG00000001234	PTCD2	91	45.115	Heterocephalus_glaber_female
ENSACLG00000027742	ptcd2	89	45.115	ENSHGLG00100015419	PTCD2	91	45.115	Heterocephalus_glaber_male
ENSACLG00000027742	ptcd2	98	68.052	ENSHCOG00000001703	ptcd2	100	68.052	Hippocampus_comes
ENSACLG00000027742	ptcd2	92	55.278	ENSIPUG00000006080	ptcd2	99	54.569	Ictalurus_punctatus
ENSACLG00000027742	ptcd2	95	43.200	ENSSTOG00000006596	PTCD2	97	43.200	Ictidomys_tridecemlineatus
ENSACLG00000027742	ptcd2	89	46.991	ENSJJAG00000024388	Ptcd2	91	46.991	Jaculus_jaculus
ENSACLG00000027742	ptcd2	98	63.158	ENSKMAG00000009329	ptcd2	99	63.158	Kryptolebias_marmoratus
ENSACLG00000027742	ptcd2	100	72.165	ENSLBEG00000024871	ptcd2	99	72.165	Labrus_bergylta
ENSACLG00000027742	ptcd2	98	53.906	ENSLOCG00000011122	ptcd2	100	53.906	Lepisosteus_oculatus
ENSACLG00000027742	ptcd2	71	50.182	ENSLAFG00000004115	PTCD2	88	50.182	Loxodonta_africana
ENSACLG00000027742	ptcd2	99	44.330	ENSMFAG00000031516	PTCD2	99	44.330	Macaca_fascicularis
ENSACLG00000027742	ptcd2	96	44.533	ENSMNEG00000007537	PTCD2	98	44.533	Macaca_nemestrina
ENSACLG00000027742	ptcd2	99	43.814	ENSMLEG00000031093	PTCD2	99	43.814	Mandrillus_leucophaeus
ENSACLG00000027742	ptcd2	98	78.478	ENSMAMG00000018529	ptcd2	100	78.478	Mastacembelus_armatus
ENSACLG00000027742	ptcd2	100	100.000	ENSMZEG00005003625	ptcd2	100	100.000	Maylandia_zebra
ENSACLG00000027742	ptcd2	89	44.540	ENSMGAG00000005033	PTCD2	100	44.540	Meleagris_gallopavo
ENSACLG00000027742	ptcd2	89	42.353	ENSMAUG00000020253	Ptcd2	90	38.177	Mesocricetus_auratus
ENSACLG00000027742	ptcd2	95	43.272	ENSMICG00000004535	PTCD2	98	43.272	Microcebus_murinus
ENSACLG00000027742	ptcd2	95	44.744	ENSMOCG00000019985	Ptcd2	97	44.744	Microtus_ochrogaster
ENSACLG00000027742	ptcd2	98	43.636	ENSMODG00000001695	PTCD2	100	43.636	Monodelphis_domestica
ENSACLG00000027742	ptcd2	98	77.953	ENSMALG00000022372	ptcd2	100	77.953	Monopterus_albus
ENSACLG00000027742	ptcd2	89	44.828	MGP_CAROLIEiJ_G0018829	Ptcd2	91	44.828	Mus_caroli
ENSACLG00000027742	ptcd2	89	44.540	ENSMUSG00000021650	Ptcd2	91	44.540	Mus_musculus
ENSACLG00000027742	ptcd2	89	45.690	MGP_PahariEiJ_G0015904	Ptcd2	91	45.690	Mus_pahari
ENSACLG00000027742	ptcd2	89	45.402	MGP_SPRETEiJ_G0019711	Ptcd2	91	45.402	Mus_spretus
ENSACLG00000027742	ptcd2	89	46.705	ENSMPUG00000014401	PTCD2	91	46.705	Mustela_putorius_furo
ENSACLG00000027742	ptcd2	89	44.540	ENSMLUG00000007374	PTCD2	91	44.476	Myotis_lucifugus
ENSACLG00000027742	ptcd2	89	43.966	ENSNGAG00000005027	Ptcd2	91	43.966	Nannospalax_galili
ENSACLG00000027742	ptcd2	85	93.921	ENSNBRG00000000092	-	100	93.921	Neolamprologus_brichardi
ENSACLG00000027742	ptcd2	98	98.950	ENSNBRG00000008174	ptcd2	100	98.950	Neolamprologus_brichardi
ENSACLG00000027742	ptcd2	89	44.092	ENSNLEG00000004516	PTCD2	89	44.092	Nomascus_leucogenys
ENSACLG00000027742	ptcd2	59	55.215	ENSMEUG00000014012	-	63	52.273	Notamacropus_eugenii
ENSACLG00000027742	ptcd2	89	45.690	ENSOPRG00000007290	PTCD2	90	45.690	Ochotona_princeps
ENSACLG00000027742	ptcd2	92	44.687	ENSODEG00000016417	PTCD2	96	44.687	Octodon_degus
ENSACLG00000027742	ptcd2	86	97.904	ENSONIG00000011269	ptcd2	98	97.904	Oreochromis_niloticus
ENSACLG00000027742	ptcd2	89	45.402	ENSOCUG00000007970	PTCD2	91	45.402	Oryctolagus_cuniculus
ENSACLG00000027742	ptcd2	100	73.333	ENSORLG00000003851	ptcd2	100	73.333	Oryzias_latipes
ENSACLG00000027742	ptcd2	98	72.585	ENSORLG00020009823	ptcd2	100	72.585	Oryzias_latipes_hni
ENSACLG00000027742	ptcd2	89	72.464	ENSORLG00015016777	ptcd2	99	72.464	Oryzias_latipes_hsok
ENSACLG00000027742	ptcd2	100	73.077	ENSOMEG00000012396	ptcd2	95	73.077	Oryzias_melastigma
ENSACLG00000027742	ptcd2	89	46.264	ENSOGAG00000008390	PTCD2	90	46.264	Otolemur_garnettii
ENSACLG00000027742	ptcd2	91	44.598	ENSOARG00000005087	PTCD2	93	44.598	Ovis_aries
ENSACLG00000027742	ptcd2	95	42.216	ENSPPAG00000028480	PTCD2	98	42.216	Pan_paniscus
ENSACLG00000027742	ptcd2	95	41.953	ENSPTRG00000016968	PTCD2	98	41.953	Pan_troglodytes
ENSACLG00000027742	ptcd2	89	45.797	ENSPANG00000006611	PTCD2	89	45.797	Papio_anubis
ENSACLG00000027742	ptcd2	98	54.922	ENSPKIG00000019896	ptcd2	100	54.922	Paramormyrops_kingsleyae
ENSACLG00000027742	ptcd2	78	48.684	ENSPSIG00000014559	PTCD2	94	48.684	Pelodiscus_sinensis
ENSACLG00000027742	ptcd2	95	46.649	ENSPEMG00000000884	Ptcd2	97	46.649	Peromyscus_maniculatus_bairdii
ENSACLG00000027742	ptcd2	91	45.961	ENSPCIG00000029047	PTCD2	93	45.961	Phascolarctos_cinereus
ENSACLG00000027742	ptcd2	98	76.053	ENSPLAG00000010456	ptcd2	99	76.053	Poecilia_latipinna
ENSACLG00000027742	ptcd2	99	74.742	ENSPREG00000021797	ptcd2	99	74.742	Poecilia_reticulata
ENSACLG00000027742	ptcd2	89	38.793	ENSPPYG00000015543	PTCD2	88	38.793	Pongo_abelii
ENSACLG00000027742	ptcd2	71	41.971	ENSPCAG00000006806	PTCD2	87	41.971	Procavia_capensis
ENSACLG00000027742	ptcd2	89	45.115	ENSPVAG00000010935	PTCD2	90	45.115	Pteropus_vampyrus
ENSACLG00000027742	ptcd2	100	99.485	ENSPNYG00000003122	ptcd2	100	99.485	Pundamilia_nyererei
ENSACLG00000027742	ptcd2	98	63.021	ENSPNAG00000021490	ptcd2	100	63.021	Pygocentrus_nattereri
ENSACLG00000027742	ptcd2	94	45.946	ENSRNOG00000028403	Ptcd2	97	45.946	Rattus_norvegicus
ENSACLG00000027742	ptcd2	96	40.267	ENSRBIG00000032929	PTCD2	96	40.267	Rhinopithecus_bieti
ENSACLG00000027742	ptcd2	96	44.000	ENSRROG00000000080	PTCD2	98	44.000	Rhinopithecus_roxellana
ENSACLG00000027742	ptcd2	94	41.910	ENSSBOG00000018911	PTCD2	98	41.910	Saimiri_boliviensis_boliviensis
ENSACLG00000027742	ptcd2	96	44.297	ENSSHAG00000003833	PTCD2	97	44.297	Sarcophilus_harrisii
ENSACLG00000027742	ptcd2	98	53.646	ENSSFOG00015015415	ptcd2	100	53.646	Scleropages_formosus
ENSACLG00000027742	ptcd2	98	67.532	ENSSMAG00000010350	ptcd2	100	67.532	Scophthalmus_maximus
ENSACLG00000027742	ptcd2	100	78.866	ENSSDUG00000008142	ptcd2	97	78.866	Seriola_dumerili
ENSACLG00000027742	ptcd2	98	79.003	ENSSLDG00000015284	ptcd2	100	79.003	Seriola_lalandi_dorsalis
ENSACLG00000027742	ptcd2	71	41.241	ENSSARG00000004983	PTCD2	87	41.241	Sorex_araneus
ENSACLG00000027742	ptcd2	89	45.977	ENSSPUG00000000176	PTCD2	87	45.977	Sphenodon_punctatus
ENSACLG00000027742	ptcd2	100	71.649	ENSSPAG00000008591	ptcd2	100	71.649	Stegastes_partitus
ENSACLG00000027742	ptcd2	93	44.809	ENSSSCG00000016975	PTCD2	86	44.809	Sus_scrofa
ENSACLG00000027742	ptcd2	89	45.797	ENSTGUG00000005705	PTCD2	99	45.797	Taeniopygia_guttata
ENSACLG00000027742	ptcd2	95	42.298	ENSTBEG00000016559	PTCD2	98	42.298	Tupaia_belangeri
ENSACLG00000027742	ptcd2	89	45.977	ENSTTRG00000011851	PTCD2	89	45.977	Tursiops_truncatus
ENSACLG00000027742	ptcd2	89	45.845	ENSUAMG00000007583	PTCD2	81	45.845	Ursus_americanus
ENSACLG00000027742	ptcd2	93	45.082	ENSUMAG00000007666	PTCD2	95	45.082	Ursus_maritimus
ENSACLG00000027742	ptcd2	89	44.253	ENSVPAG00000009597	PTCD2	89	44.253	Vicugna_pacos
ENSACLG00000027742	ptcd2	89	48.138	ENSVVUG00000007299	-	92	48.023	Vulpes_vulpes
ENSACLG00000027742	ptcd2	89	44.857	ENSXETG00000031652	PTCD2	91	44.857	Xenopus_tropicalis
ENSACLG00000027742	ptcd2	99	75.064	ENSXMAG00000005940	ptcd2	92	75.064	Xiphophorus_maculatus