EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027743 (Gene tree)
Gene ID: 113020767
Gene Symbol: -
Alias: -
Full Name: nuclear GTPase SLIP-GC-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 12270 bases
Position: chr4:14727267-14739536
Accession: 113020767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000041214	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000042183	-	2718	-	ENSACLP00000041214	807 (aa)	XP_026020777	UPI000E42668D

Gene Model

Click here to download ENSACLG00000027743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027743	-	78	58.833	ENSACLG00000027785	-	99	59.710
ENSACLG00000027743	-	95	71.895	ENSACLG00000027781	-	97	71.769
ENSACLG00000027743	-	62	58.149	ENSACLG00000009378	-	96	58.266
ENSACLG00000027743	-	82	57.399	ENSACLG00000027749	-	98	57.250
ENSACLG00000027743	-	90	86.897	ENSACLG00000027770	-	95	86.981
ENSACLG00000027743	-	89	71.074	ENSACLG00000027763	-	94	71.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027743	-	78	31.306	ENSG00000189233	NUGGC	83	31.157	Homo_sapiens
ENSACLG00000027743	-	77	60.843	ENSAPEG00000007463	-	99	60.451	Amphiprion_percula
ENSACLG00000027743	-	97	59.227	ENSAPEG00000007405	-	99	58.260	Amphiprion_percula
ENSACLG00000027743	-	96	59.269	ENSAPEG00000008962	-	99	58.134	Amphiprion_percula
ENSACLG00000027743	-	84	63.889	ENSATEG00000024350	-	100	63.893	Anabas_testudineus
ENSACLG00000027743	-	83	38.592	ENSAMXG00000035650	-	99	38.592	Astyanax_mexicanus
ENSACLG00000027743	-	80	37.263	ENSAMXG00000007315	-	90	37.263	Astyanax_mexicanus
ENSACLG00000027743	-	78	31.602	ENSCJAG00000015456	NUGGC	83	31.454	Callithrix_jacchus
ENSACLG00000027743	-	78	31.602	ENSCATG00000011556	NUGGC	83	31.454	Cercocebus_atys
ENSACLG00000027743	-	97	46.939	ENSELUG00000016238	-	82	43.906	Esox_lucius
ENSACLG00000027743	-	82	46.176	ENSELUG00000016154	-	79	46.266	Esox_lucius
ENSACLG00000027743	-	95	41.069	ENSELUG00000016324	-	97	40.754	Esox_lucius
ENSACLG00000027743	-	75	55.031	ENSGACG00000011412	-	100	54.717	Gasterosteus_aculeatus
ENSACLG00000027743	-	71	61.962	ENSLBEG00000025738	-	97	61.962	Labrus_bergylta
ENSACLG00000027743	-	78	52.366	ENSLBEG00000027088	-	96	52.824	Labrus_bergylta
ENSACLG00000027743	-	80	33.284	ENSLOCG00000002868	-	98	33.284	Lepisosteus_oculatus
ENSACLG00000027743	-	78	31.454	ENSMFAG00000043857	NUGGC	83	31.306	Macaca_fascicularis
ENSACLG00000027743	-	78	31.454	ENSMMUG00000001040	NUGGC	83	31.157	Macaca_mulatta
ENSACLG00000027743	-	78	31.454	ENSMNEG00000045452	NUGGC	83	31.306	Macaca_nemestrina
ENSACLG00000027743	-	52	59.217	ENSMAMG00000023343	-	68	58.756	Mastacembelus_armatus
ENSACLG00000027743	-	94	98.681	ENSMZEG00005023374	-	100	98.681	Maylandia_zebra
ENSACLG00000027743	-	83	60.148	ENSMZEG00005026592	-	99	60.593	Maylandia_zebra
ENSACLG00000027743	-	100	81.677	ENSMZEG00005004230	-	100	81.916	Maylandia_zebra
ENSACLG00000027743	-	89	58.832	ENSMZEG00005004202	-	99	58.971	Maylandia_zebra
ENSACLG00000027743	-	93	83.733	ENSMZEG00005023434	-	89	83.758	Maylandia_zebra
ENSACLG00000027743	-	83	59.733	ENSMZEG00005023437	-	99	59.881	Maylandia_zebra
ENSACLG00000027743	-	97	55.286	ENSMZEG00005023384	-	100	54.313	Maylandia_zebra
ENSACLG00000027743	-	69	35.470	ENSMAUG00000014486	Nuggc	80	35.470	Mesocricetus_auratus
ENSACLG00000027743	-	78	30.281	ENSMICG00000030884	NUGGC	83	30.576	Microcebus_murinus
ENSACLG00000027743	-	77	58.216	ENSONIG00000017112	-	99	57.433	Oreochromis_niloticus
ENSACLG00000027743	-	73	52.464	ENSONIG00000015367	-	99	52.208	Oreochromis_niloticus
ENSACLG00000027743	-	96	56.890	ENSONIG00000005156	-	99	59.046	Oreochromis_niloticus
ENSACLG00000027743	-	73	51.685	ENSONIG00000012332	-	99	51.685	Oreochromis_niloticus
ENSACLG00000027743	-	96	54.591	ENSPFOG00000006073	-	99	54.467	Poecilia_formosa
ENSACLG00000027743	-	96	53.580	ENSPLAG00000016480	-	99	54.121	Poecilia_latipinna
ENSACLG00000027743	-	79	56.832	ENSPMEG00000014636	-	99	56.878	Poecilia_mexicana
ENSACLG00000027743	-	76	60.093	ENSPREG00000009634	-	100	59.627	Poecilia_reticulata
ENSACLG00000027743	-	70	64.851	ENSPREG00000007347	-	98	65.026	Poecilia_reticulata
ENSACLG00000027743	-	90	70.204	ENSPNYG00000002532	-	95	70.548	Pundamilia_nyererei
ENSACLG00000027743	-	83	37.588	ENSPNAG00000003204	-	94	37.588	Pygocentrus_nattereri
ENSACLG00000027743	-	69	46.429	ENSRBIG00000043902	NUGGC	81	46.429	Rhinopithecus_bieti
ENSACLG00000027743	-	69	46.429	ENSSBOG00000028930	NUGGC	81	46.429	Saimiri_boliviensis_boliviensis
ENSACLG00000027743	-	89	32.405	ENSSFOG00015023994	-	78	33.604	Scleropages_formosus
ENSACLG00000027743	-	95	56.724	ENSSMAG00000015947	nuggc.3	99	57.090	Scophthalmus_maximus
ENSACLG00000027743	-	69	59.259	ENSSDUG00000010293	-	99	58.776	Seriola_dumerili
ENSACLG00000027743	-	90	59.870	ENSSPAG00000014020	-	99	60.182	Stegastes_partitus
ENSACLG00000027743	-	88	57.124	ENSSPAG00000013498	-	98	57.027	Stegastes_partitus