EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027749 (Gene tree)
Gene ID: 113020775
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 138917 bases
Position: chr4:14768384-14907300
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000041221	MMR_HSR1	PF01926.23	4.4e-07	1	1
ENSACLP00000041226	MMR_HSR1	PF01926.23	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000042190	-	5649	-	ENSACLP00000041221	655 (aa)	-	-
ENSACLT00000042195	-	6643	-	ENSACLP00000041226	655 (aa)	-	-

Gene Model

Click here to download ENSACLG00000027749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027749	-	98	57.250	ENSACLG00000027743	-	82	57.399
ENSACLG00000027749	-	86	54.073	ENSACLG00000027785	-	99	53.050
ENSACLG00000027749	-	98	53.614	ENSACLG00000027781	-	81	53.765
ENSACLG00000027749	-	65	53.425	ENSACLG00000009378	-	86	53.653
ENSACLG00000027749	-	99	73.964	ENSACLG00000027763	-	89	74.112
ENSACLG00000027749	-	99	55.917	ENSACLG00000027770	-	89	56.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027749	-	98	59.036	ENSAPEG00000007405	-	82	59.451	Amphiprion_percula
ENSACLG00000027749	-	73	56.950	ENSAPEG00000007463	-	77	57.253	Amphiprion_percula
ENSACLG00000027749	-	97	58.485	ENSAPEG00000008962	-	85	58.485	Amphiprion_percula
ENSACLG00000027749	-	98	56.175	ENSATEG00000024350	-	98	55.994	Anabas_testudineus
ENSACLG00000027749	-	97	35.857	ENSAMXG00000035650	-	97	35.857	Astyanax_mexicanus
ENSACLG00000027749	-	97	35.942	ENSAMXG00000007315	-	90	35.942	Astyanax_mexicanus
ENSACLG00000027749	-	98	39.971	ENSELUG00000016324	-	80	39.412	Esox_lucius
ENSACLG00000027749	-	95	41.857	ENSELUG00000016238	-	71	42.161	Esox_lucius
ENSACLG00000027749	-	96	43.268	ENSELUG00000016154	-	77	43.288	Esox_lucius
ENSACLG00000027749	-	72	50.696	ENSGACG00000011412	-	79	51.093	Gasterosteus_aculeatus
ENSACLG00000027749	-	89	48.815	ENSLBEG00000027088	-	93	49.289	Labrus_bergylta
ENSACLG00000027749	-	83	55.401	ENSLBEG00000025738	-	95	55.401	Labrus_bergylta
ENSACLG00000027749	-	95	33.037	ENSLOCG00000002868	-	97	33.037	Lepisosteus_oculatus
ENSACLG00000027749	-	53	58.856	ENSMAMG00000023343	-	62	59.673	Mastacembelus_armatus
ENSACLG00000027749	-	100	97.863	ENSMZEG00005023384	-	82	97.863	Maylandia_zebra
ENSACLG00000027749	-	99	55.835	ENSMZEG00005023434	-	80	56.130	Maylandia_zebra
ENSACLG00000027749	-	99	53.823	ENSMZEG00005023437	-	99	53.973	Maylandia_zebra
ENSACLG00000027749	-	98	57.164	ENSMZEG00005023374	-	88	57.313	Maylandia_zebra
ENSACLG00000027749	-	99	53.474	ENSMZEG00005004202	-	92	53.625	Maylandia_zebra
ENSACLG00000027749	-	99	53.904	ENSMZEG00005026592	-	99	53.904	Maylandia_zebra
ENSACLG00000027749	-	99	56.130	ENSMZEG00005004230	-	81	56.278	Maylandia_zebra
ENSACLG00000027749	-	81	37.799	ENSMAUG00000014486	Nuggc	79	37.799	Mesocricetus_auratus
ENSACLG00000027749	-	91	52.194	ENSONIG00000017112	-	99	52.351	Oreochromis_niloticus
ENSACLG00000027749	-	99	54.873	ENSONIG00000005156	-	99	53.443	Oreochromis_niloticus
ENSACLG00000027749	-	86	67.047	ENSONIG00000012332	-	99	67.047	Oreochromis_niloticus
ENSACLG00000027749	-	86	67.205	ENSONIG00000015367	-	99	67.205	Oreochromis_niloticus
ENSACLG00000027749	-	98	50.671	ENSPFOG00000006073	-	83	50.671	Poecilia_formosa
ENSACLG00000027749	-	96	51.589	ENSPLAG00000016480	-	82	51.331	Poecilia_latipinna
ENSACLG00000027749	-	94	50.998	ENSPMEG00000014636	-	99	50.998	Poecilia_mexicana
ENSACLG00000027749	-	71	54.192	ENSPREG00000009634	-	76	54.397	Poecilia_reticulata
ENSACLG00000027749	-	77	56.309	ENSPREG00000007347	-	92	56.685	Poecilia_reticulata
ENSACLG00000027749	-	98	70.448	ENSPNYG00000002532	-	88	70.746	Pundamilia_nyererei
ENSACLG00000027749	-	97	34.582	ENSPNAG00000003204	-	92	34.582	Pygocentrus_nattereri
ENSACLG00000027749	-	85	45.763	ENSRBIG00000043902	NUGGC	82	45.763	Rhinopithecus_bieti
ENSACLG00000027749	-	85	45.763	ENSSBOG00000028930	NUGGC	82	45.763	Saimiri_boliviensis_boliviensis
ENSACLG00000027749	-	95	31.161	ENSSFOG00015023994	-	74	31.161	Scleropages_formosus
ENSACLG00000027749	-	98	54.737	ENSSMAG00000015947	nuggc.3	81	54.737	Scophthalmus_maximus
ENSACLG00000027749	-	64	57.082	ENSSDUG00000010293	-	76	56.604	Seriola_dumerili
ENSACLG00000027749	-	90	57.668	ENSSPAG00000014020	-	80	57.920	Stegastes_partitus
ENSACLG00000027749	-	98	55.328	ENSSPAG00000013498	-	90	55.620	Stegastes_partitus