EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027770 (Gene tree)
Gene ID: 113020762
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11853 bases
Position: chr4:14925781-14937633
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000041252	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000042222	-	6296	-	ENSACLP00000041252	759 (aa)	-	-

Gene Model

Click here to download ENSACLG00000027770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027770's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027770	-	83	58.464	ENSACLG00000027785	-	99	58.877
ENSACLG00000027770	-	93	75.877	ENSACLG00000027781	-	87	75.877
ENSACLG00000027770	-	66	57.884	ENSACLG00000009378	-	96	57.884
ENSACLG00000027770	-	94	72.486	ENSACLG00000027763	-	94	72.486
ENSACLG00000027770	-	95	86.981	ENSACLG00000027743	-	90	86.897
ENSACLG00000027770	-	89	56.065	ENSACLG00000027749	-	99	55.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027770	-	95	60.138	ENSAPEG00000007405	-	90	59.586	Amphiprion_percula
ENSACLG00000027770	-	74	64.125	ENSAPEG00000007463	-	87	64.125	Amphiprion_percula
ENSACLG00000027770	-	94	60.335	ENSAPEG00000008962	-	94	58.978	Amphiprion_percula
ENSACLG00000027770	-	88	64.402	ENSATEG00000024350	-	100	64.190	Anabas_testudineus
ENSACLG00000027770	-	87	38.277	ENSAMXG00000035650	-	99	38.277	Astyanax_mexicanus
ENSACLG00000027770	-	83	37.575	ENSAMXG00000007315	-	87	37.575	Astyanax_mexicanus
ENSACLG00000027770	-	86	45.659	ENSELUG00000016154	-	78	45.672	Esox_lucius
ENSACLG00000027770	-	94	42.375	ENSELUG00000016324	-	87	42.473	Esox_lucius
ENSACLG00000027770	-	96	43.372	ENSELUG00000016238	-	82	43.758	Esox_lucius
ENSACLG00000027770	-	71	55.872	ENSGACG00000011412	-	88	56.228	Gasterosteus_aculeatus
ENSACLG00000027770	-	83	51.903	ENSLBEG00000027088	-	97	52.055	Labrus_bergylta
ENSACLG00000027770	-	75	61.102	ENSLBEG00000025738	-	97	61.102	Labrus_bergylta
ENSACLG00000027770	-	84	31.532	ENSLOCG00000002868	-	97	31.532	Lepisosteus_oculatus
ENSACLG00000027770	-	61	59.217	ENSMAMG00000023343	-	76	58.756	Mastacembelus_armatus
ENSACLG00000027770	-	96	85.675	ENSMZEG00005004230	-	88	85.675	Maylandia_zebra
ENSACLG00000027770	-	88	59.172	ENSMZEG00005026592	-	99	59.320	Maylandia_zebra
ENSACLG00000027770	-	95	87.535	ENSMZEG00005023434	-	86	87.535	Maylandia_zebra
ENSACLG00000027770	-	88	58.309	ENSMZEG00005023437	-	99	58.457	Maylandia_zebra
ENSACLG00000027770	-	95	56.000	ENSMZEG00005023384	-	88	55.862	Maylandia_zebra
ENSACLG00000027770	-	97	90.310	ENSMZEG00005023374	-	93	90.214	Maylandia_zebra
ENSACLG00000027770	-	95	57.300	ENSMZEG00005004202	-	99	57.300	Maylandia_zebra
ENSACLG00000027770	-	65	36.058	ENSMAUG00000014486	Nuggc	73	36.058	Mesocricetus_auratus
ENSACLG00000027770	-	82	57.656	ENSONIG00000017112	-	99	57.430	Oreochromis_niloticus
ENSACLG00000027770	-	94	57.799	ENSONIG00000005156	-	99	57.964	Oreochromis_niloticus
ENSACLG00000027770	-	78	51.587	ENSONIG00000015367	-	99	51.024	Oreochromis_niloticus
ENSACLG00000027770	-	77	52.090	ENSONIG00000012332	-	99	52.090	Oreochromis_niloticus
ENSACLG00000027770	-	94	55.000	ENSPFOG00000006073	-	89	55.263	Poecilia_formosa
ENSACLG00000027770	-	94	54.458	ENSPLAG00000016480	-	89	55.191	Poecilia_latipinna
ENSACLG00000027770	-	84	56.221	ENSPMEG00000014636	-	99	56.375	Poecilia_mexicana
ENSACLG00000027770	-	73	61.676	ENSPREG00000009634	-	87	61.854	Poecilia_reticulata
ENSACLG00000027770	-	74	63.204	ENSPREG00000007347	-	98	63.380	Poecilia_reticulata
ENSACLG00000027770	-	94	71.667	ENSPNYG00000002532	-	94	71.667	Pundamilia_nyererei
ENSACLG00000027770	-	91	36.070	ENSPNAG00000003204	-	98	35.801	Pygocentrus_nattereri
ENSACLG00000027770	-	74	42.373	ENSRBIG00000043902	NUGGC	81	42.373	Rhinopithecus_bieti
ENSACLG00000027770	-	77	37.500	ENSSBOG00000028930	NUGGC	84	37.500	Saimiri_boliviensis_boliviensis
ENSACLG00000027770	-	94	31.021	ENSSFOG00015023994	-	83	30.769	Scleropages_formosus
ENSACLG00000027770	-	94	59.508	ENSSMAG00000015947	nuggc.3	88	59.918	Scophthalmus_maximus
ENSACLG00000027770	-	66	62.243	ENSSDUG00000010293	-	85	62.243	Seriola_dumerili
ENSACLG00000027770	-	88	61.718	ENSSPAG00000014020	-	88	62.300	Stegastes_partitus
ENSACLG00000027770	-	94	55.511	ENSSPAG00000013498	-	98	55.451	Stegastes_partitus