EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027781 (Gene tree)
Gene ID: 113020766
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 14483 bases
Position: chr4:14952346-14966828
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000041266	MMR_HSR1	PF01926.23	6.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000042236	-	4058	-	ENSACLP00000041266	820 (aa)	-	-

Gene Model

Click here to download ENSACLG00000027781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027781's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027781	-	86	66.006	ENSACLG00000027763	-	92	65.912
ENSACLG00000027781	-	77	57.323	ENSACLG00000027785	-	99	58.877
ENSACLG00000027781	-	97	71.769	ENSACLG00000027743	-	95	71.895
ENSACLG00000027781	-	81	53.765	ENSACLG00000027749	-	98	53.614
ENSACLG00000027781	-	61	56.660	ENSACLG00000009378	-	97	56.660
ENSACLG00000027781	-	87	75.877	ENSACLG00000027770	-	93	75.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027781	-	79	63.253	ENSAPEG00000007463	-	99	63.308	Amphiprion_percula
ENSACLG00000027781	-	97	58.375	ENSAPEG00000007405	-	98	57.875	Amphiprion_percula
ENSACLG00000027781	-	97	57.750	ENSAPEG00000008962	-	98	57.250	Amphiprion_percula
ENSACLG00000027781	-	79	61.162	ENSATEG00000024350	-	97	60.856	Anabas_testudineus
ENSACLG00000027781	-	79	38.171	ENSAMXG00000035650	-	96	38.026	Astyanax_mexicanus
ENSACLG00000027781	-	77	38.195	ENSAMXG00000007315	-	86	38.045	Astyanax_mexicanus
ENSACLG00000027781	-	95	40.728	ENSELUG00000016238	-	81	40.566	Esox_lucius
ENSACLG00000027781	-	79	44.904	ENSELUG00000016154	-	78	45.414	Esox_lucius
ENSACLG00000027781	-	95	41.422	ENSELUG00000016324	-	96	41.544	Esox_lucius
ENSACLG00000027781	-	77	53.033	ENSGACG00000011412	-	99	53.344	Gasterosteus_aculeatus
ENSACLG00000027781	-	77	50.837	ENSLBEG00000027088	-	97	50.837	Labrus_bergylta
ENSACLG00000027781	-	70	61.102	ENSLBEG00000025738	-	97	61.102	Labrus_bergylta
ENSACLG00000027781	-	81	31.753	ENSLOCG00000002868	-	99	31.753	Lepisosteus_oculatus
ENSACLG00000027781	-	52	58.676	ENSMAMG00000023343	-	68	59.361	Mastacembelus_armatus
ENSACLG00000027781	-	97	53.580	ENSMZEG00005023384	-	98	53.333	Maylandia_zebra
ENSACLG00000027781	-	90	74.932	ENSMZEG00005023434	-	84	76.017	Maylandia_zebra
ENSACLG00000027781	-	81	57.594	ENSMZEG00005023437	-	98	57.594	Maylandia_zebra
ENSACLG00000027781	-	87	56.145	ENSMZEG00005004202	-	97	56.145	Maylandia_zebra
ENSACLG00000027781	-	81	59.070	ENSMZEG00005026592	-	98	59.220	Maylandia_zebra
ENSACLG00000027781	-	97	72.396	ENSMZEG00005023374	-	93	75.596	Maylandia_zebra
ENSACLG00000027781	-	97	73.500	ENSMZEG00005004230	-	95	73.500	Maylandia_zebra
ENSACLG00000027781	-	63	37.321	ENSMAUG00000014486	Nuggc	76	37.321	Mesocricetus_auratus
ENSACLG00000027781	-	72	50.078	ENSONIG00000015367	-	99	50.078	Oreochromis_niloticus
ENSACLG00000027781	-	72	49.199	ENSONIG00000012332	-	99	48.107	Oreochromis_niloticus
ENSACLG00000027781	-	76	58.034	ENSONIG00000017112	-	99	57.722	Oreochromis_niloticus
ENSACLG00000027781	-	96	55.781	ENSONIG00000005156	-	99	57.307	Oreochromis_niloticus
ENSACLG00000027781	-	98	52.703	ENSPFOG00000006073	-	100	53.071	Poecilia_formosa
ENSACLG00000027781	-	97	51.784	ENSPLAG00000016480	-	98	52.781	Poecilia_latipinna
ENSACLG00000027781	-	77	54.361	ENSPMEG00000014636	-	98	54.829	Poecilia_mexicana
ENSACLG00000027781	-	68	63.849	ENSPREG00000007347	-	97	63.849	Poecilia_reticulata
ENSACLG00000027781	-	78	60.093	ENSPREG00000009634	-	100	60.093	Poecilia_reticulata
ENSACLG00000027781	-	86	65.028	ENSPNYG00000002532	-	92	65.028	Pundamilia_nyererei
ENSACLG00000027781	-	83	36.777	ENSPNAG00000003204	-	96	36.639	Pygocentrus_nattereri
ENSACLG00000027781	-	74	32.787	ENSRBIG00000043902	NUGGC	86	32.787	Rhinopithecus_bieti
ENSACLG00000027781	-	76	34.043	ENSSBOG00000028930	NUGGC	89	34.043	Saimiri_boliviensis_boliviensis
ENSACLG00000027781	-	79	30.942	ENSSFOG00015023994	-	75	31.364	Scleropages_formosus
ENSACLG00000027781	-	96	56.468	ENSSMAG00000015947	nuggc.3	97	56.646	Scophthalmus_maximus
ENSACLG00000027781	-	71	61.675	ENSSDUG00000010293	-	99	61.675	Seriola_dumerili
ENSACLG00000027781	-	86	53.479	ENSSPAG00000013498	-	97	53.415	Stegastes_partitus
ENSACLG00000027781	-	92	62.047	ENSSPAG00000014020	-	99	62.176	Stegastes_partitus