EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027785 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 99821 bases
Position: chr4:15121337-15221157
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000041281	MMR_HSR1	PF01926.23	1.6e-06	1	1
ENSACLP00000041288	MMR_HSR1	PF01926.23	2.5e-06	1	1
ENSACLP00000041295	MMR_HSR1	PF01926.23	2.5e-06	1	1
ENSACLP00000041273	MMR_HSR1	PF01926.23	2.5e-06	1	1
ENSACLP00000041298	MMR_HSR1	PF01926.23	1.7e-05	1	1
ENSACLP00000041276	MMR_HSR1	PF01926.23	2e-05	1	1
ENSACLP00000041278	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000042268	-	1794	-	ENSACLP00000041295	590 (aa)	-	-
ENSACLT00000042246	-	2007	-	ENSACLP00000041276	636 (aa)	-	-
ENSACLT00000042243	-	6103	-	ENSACLP00000041273	632 (aa)	-	-
ENSACLT00000042253	-	6016	-	ENSACLP00000041281	635 (aa)	-	-
ENSACLT00000042261	-	1794	-	ENSACLP00000041288	590 (aa)	-	-
ENSACLT00000042271	-	1750	-	ENSACLP00000041298	542 (aa)	-	-
ENSACLT00000042250	-	6034	-	ENSACLP00000041278	641 (aa)	-	-

Gene Model

Click here to download ENSACLG00000027785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027785	-	99	53.050	ENSACLG00000027749	-	86	54.073
ENSACLG00000027785	-	99	59.710	ENSACLG00000027743	-	78	58.833
ENSACLG00000027785	-	83	92.073	ENSACLG00000009378	-	97	93.047
ENSACLG00000027785	-	99	58.877	ENSACLG00000027781	-	77	57.323
ENSACLG00000027785	-	99	58.877	ENSACLG00000027770	-	83	58.464
ENSACLG00000027785	-	99	57.143	ENSACLG00000027763	-	83	56.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027785	-	98	54.662	ENSAPEG00000007405	-	78	55.008	Amphiprion_percula
ENSACLG00000027785	-	93	57.824	ENSAPEG00000007463	-	86	56.696	Amphiprion_percula
ENSACLG00000027785	-	99	54.727	ENSAPEG00000008962	-	77	56.397	Amphiprion_percula
ENSACLG00000027785	-	99	54.792	ENSATEG00000024350	-	87	56.293	Anabas_testudineus
ENSACLG00000027785	-	99	36.130	ENSAMXG00000035650	-	88	37.402	Astyanax_mexicanus
ENSACLG00000027785	-	92	35.963	ENSAMXG00000007315	-	79	36.738	Astyanax_mexicanus
ENSACLG00000027785	-	97	44.096	ENSELUG00000016154	-	67	43.662	Esox_lucius
ENSACLG00000027785	-	99	42.807	ENSELUG00000016324	-	73	42.995	Esox_lucius
ENSACLG00000027785	-	97	44.505	ENSELUG00000016238	-	68	43.860	Esox_lucius
ENSACLG00000027785	-	90	51.644	ENSGACG00000011412	-	88	50.796	Gasterosteus_aculeatus
ENSACLG00000027785	-	99	47.695	ENSLBEG00000027088	-	92	47.377	Labrus_bergylta
ENSACLG00000027785	-	97	55.738	ENSLBEG00000025738	-	99	54.950	Labrus_bergylta
ENSACLG00000027785	-	98	30.389	ENSLOCG00000002868	-	82	32.162	Lepisosteus_oculatus
ENSACLG00000027785	-	69	54.798	ENSMAMG00000023343	-	62	58.760	Mastacembelus_armatus
ENSACLG00000027785	-	99	91.252	ENSMZEG00005004202	-	86	91.721	Maylandia_zebra
ENSACLG00000027785	-	99	93.271	ENSMZEG00005026592	-	86	96.820	Maylandia_zebra
ENSACLG00000027785	-	99	58.598	ENSMZEG00005023434	-	74	58.413	Maylandia_zebra
ENSACLG00000027785	-	99	90.185	ENSMZEG00005023437	-	86	91.696	Maylandia_zebra
ENSACLG00000027785	-	99	58.514	ENSMZEG00005004230	-	76	57.928	Maylandia_zebra
ENSACLG00000027785	-	99	53.420	ENSMZEG00005023384	-	76	53.981	Maylandia_zebra
ENSACLG00000027785	-	99	60.073	ENSMZEG00005023374	-	83	59.148	Maylandia_zebra
ENSACLG00000027785	-	94	48.066	ENSONIG00000015367	-	93	46.980	Oreochromis_niloticus
ENSACLG00000027785	-	99	80.000	ENSONIG00000017112	-	93	81.376	Oreochromis_niloticus
ENSACLG00000027785	-	99	78.333	ENSONIG00000005156	-	93	78.369	Oreochromis_niloticus
ENSACLG00000027785	-	94	49.534	ENSONIG00000012332	-	93	49.320	Oreochromis_niloticus
ENSACLG00000027785	-	99	52.158	ENSPFOG00000006073	-	77	52.472	Poecilia_formosa
ENSACLG00000027785	-	98	50.580	ENSPLAG00000016480	-	77	52.050	Poecilia_latipinna
ENSACLG00000027785	-	93	53.167	ENSPMEG00000014636	-	85	53.142	Poecilia_mexicana
ENSACLG00000027785	-	99	57.685	ENSPREG00000007347	-	98	57.651	Poecilia_reticulata
ENSACLG00000027785	-	92	56.311	ENSPREG00000009634	-	86	56.014	Poecilia_reticulata
ENSACLG00000027785	-	99	55.197	ENSPNYG00000002532	-	83	55.280	Pundamilia_nyererei
ENSACLG00000027785	-	98	35.103	ENSPNAG00000003204	-	85	35.294	Pygocentrus_nattereri
ENSACLG00000027785	-	75	46.429	ENSRBIG00000043902	NUGGC	69	46.552	Rhinopithecus_bieti
ENSACLG00000027785	-	75	46.429	ENSSBOG00000028930	NUGGC	69	46.552	Saimiri_boliviensis_boliviensis
ENSACLG00000027785	-	99	30.815	ENSSFOG00015023994	-	74	31.348	Scleropages_formosus
ENSACLG00000027785	-	99	54.724	ENSSMAG00000015947	nuggc.3	76	54.403	Scophthalmus_maximus
ENSACLG00000027785	-	82	55.871	ENSSDUG00000010293	-	84	55.682	Seriola_dumerili
ENSACLG00000027785	-	99	50.368	ENSSPAG00000013498	-	89	50.368	Stegastes_partitus
ENSACLG00000027785	-	99	58.094	ENSSPAG00000014020	-	84	56.925	Stegastes_partitus