EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000027916 (Gene tree)
Gene ID: 113025561
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113025561
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4794 bases
Position: chr7:17225457-17230250
Accession: 113025561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000041475	PABP	PF00658.18	7.6e-44	1	3
ENSACLP00000041475	PABP	PF00658.18	7.6e-44	2	3
ENSACLP00000041475	PABP	PF00658.18	7.6e-44	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000042454	-	2108	-	ENSACLP00000041475	215 (aa)	XP_026029238	UPI000E414C03

Gene Model

Click here to download ENSACLG00000027916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027916's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027916	-	99	83.178	ENSAPOG00000023881	-	100	83.178	Acanthochromis_polyacanthus
ENSACLG00000027916	-	99	82.243	ENSAOCG00000019884	-	100	82.243	Amphiprion_ocellaris
ENSACLG00000027916	-	99	82.243	ENSAPEG00000020987	-	100	82.243	Amphiprion_percula
ENSACLG00000027916	-	98	80.374	ENSATEG00000013831	-	99	80.374	Anabas_testudineus
ENSACLG00000027916	-	99	57.604	ENSAMXG00000041484	-	95	58.333	Astyanax_mexicanus
ENSACLG00000027916	-	93	74.332	ENSCSEG00000001317	-	100	74.332	Cynoglossus_semilaevis
ENSACLG00000027916	-	100	74.537	ENSCVAG00000000578	-	100	74.537	Cyprinodon_variegatus
ENSACLG00000027916	-	99	67.290	ENSELUG00000001731	-	80	67.290	Esox_lucius
ENSACLG00000027916	-	98	75.943	ENSFHEG00000007741	-	98	75.943	Fundulus_heteroclitus
ENSACLG00000027916	-	97	72.131	ENSGAFG00000012983	-	67	72.131	Gambusia_affinis
ENSACLG00000027916	-	100	94.258	ENSHBUG00000000185	-	59	94.258	Haplochromis_burtoni
ENSACLG00000027916	-	99	68.056	ENSHCOG00000003117	-	100	68.056	Hippocampus_comes
ENSACLG00000027916	-	99	79.717	ENSKMAG00000011397	-	99	79.717	Kryptolebias_marmoratus
ENSACLG00000027916	-	100	80.374	ENSLBEG00000027847	-	96	80.374	Labrus_bergylta
ENSACLG00000027916	-	94	59.848	ENSLOCG00000003085	-	98	58.333	Lepisosteus_oculatus
ENSACLG00000027916	-	99	84.579	ENSMAMG00000017628	-	100	84.579	Mastacembelus_armatus
ENSACLG00000027916	-	96	70.492	ENSMMOG00000004490	-	91	70.492	Mola_mola
ENSACLG00000027916	-	98	82.075	ENSMALG00000004586	-	99	82.075	Monopterus_albus
ENSACLG00000027916	-	94	94.382	ENSNBRG00000006752	-	74	94.382	Neolamprologus_brichardi
ENSACLG00000027916	-	94	60.500	ENSPKIG00000005307	-	93	61.792	Paramormyrops_kingsleyae
ENSACLG00000027916	-	96	64.444	ENSPMGG00000004590	-	97	64.444	Periophthalmus_magnuspinnatus
ENSACLG00000027916	-	98	78.302	ENSPFOG00000023453	-	99	78.302	Poecilia_formosa
ENSACLG00000027916	-	99	78.505	ENSPLAG00000003198	-	99	78.505	Poecilia_latipinna
ENSACLG00000027916	-	94	73.034	ENSPMEG00000022008	-	76	73.034	Poecilia_mexicana
ENSACLG00000027916	-	99	73.239	ENSPREG00000001981	-	98	73.239	Poecilia_reticulata
ENSACLG00000027916	-	92	90.230	ENSPNYG00000004740	-	90	90.230	Pundamilia_nyererei
ENSACLG00000027916	-	85	47.312	ENSPNAG00000018692	-	73	47.312	Pygocentrus_nattereri
ENSACLG00000027916	-	98	62.736	ENSSFOG00015001322	-	95	62.736	Scleropages_formosus
ENSACLG00000027916	-	99	78.302	ENSSMAG00000008778	-	99	78.302	Scophthalmus_maximus
ENSACLG00000027916	-	100	84.722	ENSSDUG00000015116	-	100	84.722	Seriola_dumerili
ENSACLG00000027916	-	100	83.796	ENSSLDG00000000425	-	100	83.796	Seriola_lalandi_dorsalis
ENSACLG00000027916	-	99	84.112	ENSSPAG00000015141	-	100	84.112	Stegastes_partitus
ENSACLG00000027916	-	99	73.148	ENSTRUG00000021899	-	100	73.148	Takifugu_rubripes
ENSACLG00000027916	-	99	67.757	ENSTNIG00000002576	-	99	67.757	Tetraodon_nigroviridis
ENSACLG00000027916	-	99	62.911	ENSXCOG00000001548	-	97	62.911	Xiphophorus_couchianus
ENSACLG00000027916	-	100	78.972	ENSXMAG00000021863	-	99	78.972	Xiphophorus_maculatus