EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000027924 (Gene tree)
Gene ID: 113016656
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 14202 bases
Position: chr23:38499240-38513441
Accession: 113016656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000041491	RNase_Zc3h12a	PF11977.8	7.1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000042470	-	3436	-	ENSACLP00000041491	963 (aa)	XP_026015425	UPI000E419B77

Gene Model

Click here to download ENSACLG00000027924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000027924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000027924	-	64	53.736	ENSACLG00000018493	-	99	44.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000027924	-	83	49.112	ENSAPOG00000001632	-	83	73.824	Acanthochromis_polyacanthus
ENSACLG00000027924	-	79	84.115	ENSAPOG00000015355	-	82	83.594	Acanthochromis_polyacanthus
ENSACLG00000027924	-	100	74.250	ENSACIG00000001362	-	97	75.670	Amphilophus_citrinellus
ENSACLG00000027924	-	99	86.068	ENSAOCG00000003866	-	98	86.716	Amphiprion_ocellaris
ENSACLG00000027924	-	100	78.395	ENSAPEG00000005727	-	99	87.438	Amphiprion_percula
ENSACLG00000027924	-	72	80.401	ENSAPEG00000018582	-	99	86.441	Amphiprion_percula
ENSACLG00000027924	-	83	48.214	ENSATEG00000002260	-	83	81.116	Anabas_testudineus
ENSACLG00000027924	-	100	84.173	ENSATEG00000004134	-	100	83.864	Anabas_testudineus
ENSACLG00000027924	-	83	47.738	ENSCSEG00000008542	-	99	43.652	Cynoglossus_semilaevis
ENSACLG00000027924	-	86	78.117	ENSCSEG00000010073	-	96	83.860	Cynoglossus_semilaevis
ENSACLG00000027924	-	100	76.543	ENSCVAG00000002328	-	100	76.410	Cyprinodon_variegatus
ENSACLG00000027924	-	83	50.711	ENSELUG00000005470	-	100	47.852	Esox_lucius
ENSACLG00000027924	-	83	57.998	ENSELUG00000009319	-	95	57.927	Esox_lucius
ENSACLG00000027924	-	91	87.500	ENSFHEG00000021225	-	100	87.500	Fundulus_heteroclitus
ENSACLG00000027924	-	70	50.000	ENSGMOG00000017975	-	100	50.000	Gadus_morhua
ENSACLG00000027924	-	100	74.333	ENSGAFG00000005290	-	100	73.895	Gambusia_affinis
ENSACLG00000027924	-	72	46.341	ENSGACG00000001339	-	99	45.143	Gasterosteus_aculeatus
ENSACLG00000027924	-	72	71.490	ENSGACG00000014201	-	100	77.739	Gasterosteus_aculeatus
ENSACLG00000027924	-	100	99.688	ENSHBUG00000006831	-	100	99.688	Haplochromis_burtoni
ENSACLG00000027924	-	100	63.731	ENSHCOG00000008878	-	99	87.755	Hippocampus_comes
ENSACLG00000027924	-	100	76.078	ENSKMAG00000011694	-	100	75.897	Kryptolebias_marmoratus
ENSACLG00000027924	-	83	48.571	ENSLBEG00000012710	-	99	45.142	Labrus_bergylta
ENSACLG00000027924	-	97	79.620	ENSLBEG00000012554	-	99	84.701	Labrus_bergylta
ENSACLG00000027924	-	100	79.939	ENSLBEG00000003547	-	100	79.695	Labrus_bergylta
ENSACLG00000027924	-	83	49.455	ENSMAMG00000020372	-	99	44.554	Mastacembelus_armatus
ENSACLG00000027924	-	99	76.875	ENSMAMG00000021794	-	98	87.454	Mastacembelus_armatus
ENSACLG00000027924	-	100	99.896	ENSMZEG00005007718	-	100	99.896	Maylandia_zebra
ENSACLG00000027924	-	64	53.736	ENSMZEG00005019137	-	90	70.323	Maylandia_zebra
ENSACLG00000027924	-	91	84.722	ENSMMOG00000005728	-	99	83.946	Mola_mola
ENSACLG00000027924	-	83	48.317	ENSMMOG00000019526	-	79	49.041	Mola_mola
ENSACLG00000027924	-	100	80.639	ENSMALG00000010501	-	100	80.844	Monopterus_albus
ENSACLG00000027924	-	100	99.065	ENSNBRG00000006978	-	100	99.065	Neolamprologus_brichardi
ENSACLG00000027924	-	64	51.962	ENSNBRG00000012175	-	90	70.323	Neolamprologus_brichardi
ENSACLG00000027924	-	100	97.824	ENSONIG00000012268	-	100	97.824	Oreochromis_niloticus
ENSACLG00000027924	-	86	79.831	ENSORLG00000029243	-	99	79.688	Oryzias_latipes
ENSACLG00000027924	-	100	75.415	ENSORLG00020017005	-	100	76.349	Oryzias_latipes_hni
ENSACLG00000027924	-	100	75.519	ENSORLG00015015211	-	100	75.723	Oryzias_latipes_hsok
ENSACLG00000027924	-	100	76.971	ENSOMEG00000006666	-	100	77.098	Oryzias_melastigma
ENSACLG00000027924	-	66	78.481	ENSPMGG00000009790	-	93	78.797	Periophthalmus_magnuspinnatus
ENSACLG00000027924	-	100	75.873	ENSPLAG00000009867	-	100	75.437	Poecilia_latipinna
ENSACLG00000027924	-	100	76.289	ENSPMEG00000006624	-	100	75.851	Poecilia_mexicana
ENSACLG00000027924	-	86	63.636	ENSPMEG00000011676	-	99	41.980	Poecilia_mexicana
ENSACLG00000027924	-	83	47.094	ENSPREG00000001607	-	73	80.263	Poecilia_reticulata
ENSACLG00000027924	-	100	75.951	ENSPREG00000010838	-	100	75.514	Poecilia_reticulata
ENSACLG00000027924	-	99	45.005	ENSSMAG00000007258	-	99	45.320	Scophthalmus_maximus
ENSACLG00000027924	-	100	83.539	ENSSMAG00000007545	-	100	82.684	Scophthalmus_maximus
ENSACLG00000027924	-	100	85.758	ENSSDUG00000021864	-	100	85.553	Seriola_dumerili
ENSACLG00000027924	-	83	51.371	ENSSDUG00000013237	-	90	66.225	Seriola_dumerili
ENSACLG00000027924	-	83	51.555	ENSSLDG00000004886	-	99	46.509	Seriola_lalandi_dorsalis
ENSACLG00000027924	-	100	85.656	ENSSLDG00000012268	-	100	85.348	Seriola_lalandi_dorsalis
ENSACLG00000027924	-	100	88.489	ENSSPAG00000009485	-	100	88.284	Stegastes_partitus
ENSACLG00000027924	-	99	46.421	ENSSPAG00000001850	-	99	45.626	Stegastes_partitus
ENSACLG00000027924	-	99	75.439	ENSTRUG00000022519	-	99	75.412	Takifugu_rubripes
ENSACLG00000027924	-	62	76.333	ENSTNIG00000014519	-	97	90.244	Tetraodon_nigroviridis
ENSACLG00000027924	-	83	47.337	ENSXMAG00000014715	-	83	80.435	Xiphophorus_maculatus
ENSACLG00000027924	-	100	75.231	ENSXMAG00000027171	-	100	75.103	Xiphophorus_maculatus