EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000000127 (Gene tree)
Gene ID: 100471793
Gene Symbol: -
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 11219 bases
Position: chrGL193435.1:224433-235651
Accession: 100471793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000000137	PseudoU_synth_2	PF00849.22	3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000000141	-	1134	-	ENSAMEP00000000137	377 (aa)	XP_002926501	D2HV09

Gene Model

Click here to download ENSAMEG00000000127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000000127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000000127	-	73	30.405	ENSAMEG00000016227	RPUSD3	80	30.405
ENSAMEG00000000127	-	62	99.099	ENSAMEG00000005953	-	100	99.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000000127	-	100	81.963	ENSG00000165526	RPUSD4	100	81.963	Homo_sapiens
ENSAMEG00000000127	-	84	52.941	ENSAPOG00000011024	rpusd4	81	52.941	Acanthochromis_polyacanthus
ENSAMEG00000000127	-	86	49.849	ENSACIG00000003533	rpusd4	96	49.849	Amphilophus_citrinellus
ENSAMEG00000000127	-	88	51.765	ENSAOCG00000015409	rpusd4	84	51.765	Amphiprion_ocellaris
ENSAMEG00000000127	-	88	52.059	ENSAPEG00000018935	rpusd4	84	52.059	Amphiprion_percula
ENSAMEG00000000127	-	82	53.674	ENSATEG00000008059	rpusd4	77	53.674	Anabas_testudineus
ENSAMEG00000000127	-	73	63.538	ENSAPLG00000013250	RPUSD4	99	62.116	Anas_platyrhynchos
ENSAMEG00000000127	-	97	60.054	ENSACAG00000000189	RPUSD4	100	60.054	Anolis_carolinensis
ENSAMEG00000000127	-	98	81.402	ENSANAG00000024050	RPUSD4	99	81.402	Aotus_nancymaae
ENSAMEG00000000127	-	89	51.327	ENSACLG00000020996	rpusd4	86	51.327	Astatotilapia_calliptera
ENSAMEG00000000127	-	90	50.000	ENSAMXG00000031479	rpusd4	95	50.445	Astyanax_mexicanus
ENSAMEG00000000127	-	99	80.965	ENSBTAG00000020900	RPUSD4	99	80.965	Bos_taurus
ENSAMEG00000000127	-	98	82.703	ENSCJAG00000042850	RPUSD4	93	82.703	Callithrix_jacchus
ENSAMEG00000000127	-	100	88.360	ENSCAFG00000010488	RPUSD4	100	88.360	Canis_familiaris
ENSAMEG00000000127	-	100	88.360	ENSCAFG00020010621	RPUSD4	100	88.360	Canis_lupus_dingo
ENSAMEG00000000127	-	100	81.266	ENSCHIG00000009975	RPUSD4	100	81.003	Capra_hircus
ENSAMEG00000000127	-	100	84.615	ENSTSYG00000008456	RPUSD4	100	84.615	Carlito_syrichta
ENSAMEG00000000127	-	68	78.682	ENSCAPG00000006040	RPUSD4	100	78.682	Cavia_aperea
ENSAMEG00000000127	-	100	80.637	ENSCPOG00000014971	RPUSD4	100	80.637	Cavia_porcellus
ENSAMEG00000000127	-	98	82.749	ENSCCAG00000027838	RPUSD4	99	82.749	Cebus_capucinus
ENSAMEG00000000127	-	100	82.228	ENSCATG00000041570	RPUSD4	100	82.228	Cercocebus_atys
ENSAMEG00000000127	-	100	83.289	ENSCLAG00000016553	RPUSD4	100	83.289	Chinchilla_lanigera
ENSAMEG00000000127	-	100	82.493	ENSCSAG00000002274	RPUSD4	100	82.493	Chlorocebus_sabaeus
ENSAMEG00000000127	-	73	84.477	ENSCHOG00000010249	RPUSD4	98	84.477	Choloepus_hoffmanni
ENSAMEG00000000127	-	75	67.483	ENSCPBG00000011175	RPUSD4	99	67.483	Chrysemys_picta_bellii
ENSAMEG00000000127	-	71	42.806	ENSCSAVG00000000872	-	54	42.806	Ciona_savignyi
ENSAMEG00000000127	-	100	80.902	ENSCANG00000039684	RPUSD4	100	80.902	Colobus_angolensis_palliatus
ENSAMEG00000000127	-	100	80.637	ENSCGRG00001024141	Rpusd4	100	80.637	Cricetulus_griseus_chok1gshd
ENSAMEG00000000127	-	100	80.637	ENSCGRG00000014415	Rpusd4	100	80.637	Cricetulus_griseus_crigri
ENSAMEG00000000127	-	51	43.590	ENSCSEG00000006462	-	85	43.590	Cynoglossus_semilaevis
ENSAMEG00000000127	-	85	51.227	ENSCVAG00000008761	rpusd4	92	48.753	Cyprinodon_variegatus
ENSAMEG00000000127	-	89	49.711	ENSCVAG00000000392	rpusd4	98	49.711	Cyprinodon_variegatus
ENSAMEG00000000127	-	92	49.284	ENSDARG00000012674	rpusd4	97	49.284	Danio_rerio
ENSAMEG00000000127	-	100	78.780	ENSDNOG00000020026	RPUSD4	100	78.780	Dasypus_novemcinctus
ENSAMEG00000000127	-	100	82.759	ENSDORG00000016717	Rpusd4	100	82.759	Dipodomys_ordii
ENSAMEG00000000127	-	99	80.108	ENSETEG00000013953	RPUSD4	98	80.108	Echinops_telfairi
ENSAMEG00000000127	-	100	85.411	ENSEASG00005022982	RPUSD4	100	85.411	Equus_asinus_asinus
ENSAMEG00000000127	-	100	85.146	ENSECAG00000000557	RPUSD4	100	85.146	Equus_caballus
ENSAMEG00000000127	-	81	80.108	ENSEEUG00000014036	RPUSD4	81	80.108	Erinaceus_europaeus
ENSAMEG00000000127	-	92	53.279	ENSELUG00000008075	rpusd4	95	53.279	Esox_lucius
ENSAMEG00000000127	-	100	88.329	ENSFCAG00000029789	RPUSD4	100	88.329	Felis_catus
ENSAMEG00000000127	-	88	59.337	ENSFALG00000005171	RPUSD4	98	59.337	Ficedula_albicollis
ENSAMEG00000000127	-	98	82.749	ENSFDAG00000014307	RPUSD4	98	82.749	Fukomys_damarensis
ENSAMEG00000000127	-	89	50.442	ENSFHEG00000004329	rpusd4	87	50.442	Fundulus_heteroclitus
ENSAMEG00000000127	-	84	51.713	ENSGMOG00000017726	rpusd4	95	51.713	Gadus_morhua
ENSAMEG00000000127	-	85	59.697	ENSGALG00000024326	RPUSD4	93	60.778	Gallus_gallus
ENSAMEG00000000127	-	90	47.414	ENSGAFG00000021559	rpusd4	88	47.414	Gambusia_affinis
ENSAMEG00000000127	-	87	49.102	ENSGACG00000001657	rpusd4	100	49.653	Gasterosteus_aculeatus
ENSAMEG00000000127	-	89	63.393	ENSGAGG00000000132	RPUSD4	93	63.393	Gopherus_agassizii
ENSAMEG00000000127	-	100	81.963	ENSGGOG00000016494	RPUSD4	100	81.963	Gorilla_gorilla
ENSAMEG00000000127	-	89	51.327	ENSHBUG00000022838	rpusd4	86	51.327	Haplochromis_burtoni
ENSAMEG00000000127	-	100	82.228	ENSHGLG00000002285	RPUSD4	100	82.228	Heterocephalus_glaber_female
ENSAMEG00000000127	-	100	82.228	ENSHGLG00100006385	RPUSD4	100	82.228	Heterocephalus_glaber_male
ENSAMEG00000000127	-	86	52.280	ENSHCOG00000006612	rpusd4	83	52.280	Hippocampus_comes
ENSAMEG00000000127	-	91	50.282	ENSIPUG00000023879	rusd4	91	50.282	Ictalurus_punctatus
ENSAMEG00000000127	-	97	82.967	ENSSTOG00000025280	RPUSD4	100	82.967	Ictidomys_tridecemlineatus
ENSAMEG00000000127	-	98	83.019	ENSJJAG00000018673	Rpusd4	99	83.019	Jaculus_jaculus
ENSAMEG00000000127	-	89	52.339	ENSKMAG00000021805	rpusd4	89	52.339	Kryptolebias_marmoratus
ENSAMEG00000000127	-	85	52.147	ENSLBEG00000020394	rpusd4	91	52.147	Labrus_bergylta
ENSAMEG00000000127	-	85	63.272	ENSLACG00000011028	RPUSD4	82	63.272	Latimeria_chalumnae
ENSAMEG00000000127	-	86	46.789	ENSLOCG00000003124	rpusd4	87	46.789	Lepisosteus_oculatus
ENSAMEG00000000127	-	100	81.698	ENSLAFG00000005211	RPUSD4	100	81.698	Loxodonta_africana
ENSAMEG00000000127	-	100	82.228	ENSMFAG00000039513	RPUSD4	100	82.228	Macaca_fascicularis
ENSAMEG00000000127	-	100	81.963	ENSMMUG00000007933	RPUSD4	100	81.963	Macaca_mulatta
ENSAMEG00000000127	-	100	81.963	ENSMNEG00000027414	RPUSD4	100	81.963	Macaca_nemestrina
ENSAMEG00000000127	-	100	81.698	ENSMLEG00000042461	RPUSD4	100	81.698	Mandrillus_leucophaeus
ENSAMEG00000000127	-	85	49.240	ENSMAMG00000023839	rpusd4	85	49.240	Mastacembelus_armatus
ENSAMEG00000000127	-	89	51.327	ENSMZEG00005011999	rpusd4	86	51.327	Maylandia_zebra
ENSAMEG00000000127	-	72	64.364	ENSMGAG00000000840	RPUSD4	98	60.815	Meleagris_gallopavo
ENSAMEG00000000127	-	100	79.576	ENSMAUG00000010280	Rpusd4	100	79.576	Mesocricetus_auratus
ENSAMEG00000000127	-	98	83.827	ENSMICG00000015979	RPUSD4	98	83.827	Microcebus_murinus
ENSAMEG00000000127	-	100	76.923	ENSMOCG00000000661	Rpusd4	100	76.923	Microtus_ochrogaster
ENSAMEG00000000127	-	81	53.376	ENSMMOG00000021731	rpusd4	92	53.376	Mola_mola
ENSAMEG00000000127	-	87	74.924	ENSMODG00000004521	RPUSD4	84	74.924	Monodelphis_domestica
ENSAMEG00000000127	-	80	52.443	ENSMALG00000005839	rpusd4	97	51.084	Monopterus_albus
ENSAMEG00000000127	-	100	78.515	MGP_CAROLIEiJ_G0031954	Rpusd4	100	78.515	Mus_caroli
ENSAMEG00000000127	-	100	77.719	ENSMUSG00000032044	Rpusd4	100	77.719	Mus_musculus
ENSAMEG00000000127	-	100	78.515	MGP_PahariEiJ_G0014819	Rpusd4	100	78.515	Mus_pahari
ENSAMEG00000000127	-	100	77.719	MGP_SPRETEiJ_G0033078	Rpusd4	100	77.719	Mus_spretus
ENSAMEG00000000127	-	99	93.011	ENSMPUG00000006608	RPUSD4	99	93.011	Mustela_putorius_furo
ENSAMEG00000000127	-	67	84.252	ENSMLUG00000029348	-	100	84.252	Myotis_lucifugus
ENSAMEG00000000127	-	97	82.466	ENSMLUG00000017328	-	96	82.466	Myotis_lucifugus
ENSAMEG00000000127	-	99	81.989	ENSNGAG00000020847	Rpusd4	99	81.989	Nannospalax_galili
ENSAMEG00000000127	-	87	51.497	ENSNBRG00000005207	rpusd4	96	51.497	Neolamprologus_brichardi
ENSAMEG00000000127	-	100	82.228	ENSNLEG00000007465	RPUSD4	100	82.228	Nomascus_leucogenys
ENSAMEG00000000127	-	98	69.459	ENSMEUG00000004370	RPUSD4	99	69.459	Notamacropus_eugenii
ENSAMEG00000000127	-	70	60.000	ENSOPRG00000013141	-	100	60.000	Ochotona_princeps
ENSAMEG00000000127	-	100	80.106	ENSODEG00000004577	RPUSD4	100	80.106	Octodon_degus
ENSAMEG00000000127	-	89	51.312	ENSONIG00000018879	rpusd4	92	51.312	Oreochromis_niloticus
ENSAMEG00000000127	-	77	68.367	ENSOANG00000007247	RPUSD4	95	68.013	Ornithorhynchus_anatinus
ENSAMEG00000000127	-	99	81.016	ENSOCUG00000017039	RPUSD4	99	81.016	Oryctolagus_cuniculus
ENSAMEG00000000127	-	94	48.333	ENSORLG00000002750	rpusd4	94	49.422	Oryzias_latipes
ENSAMEG00000000127	-	89	48.571	ENSORLG00020002044	rpusd4	92	47.568	Oryzias_latipes_hni
ENSAMEG00000000127	-	96	48.238	ENSORLG00015020034	rpusd4	92	48.118	Oryzias_latipes_hsok
ENSAMEG00000000127	-	83	53.145	ENSOMEG00000004861	rpusd4	78	53.145	Oryzias_melastigma
ENSAMEG00000000127	-	98	81.183	ENSOGAG00000008922	RPUSD4	98	81.183	Otolemur_garnettii
ENSAMEG00000000127	-	98	81.351	ENSOARG00000012238	RPUSD4	99	80.423	Ovis_aries
ENSAMEG00000000127	-	100	82.228	ENSPPAG00000042883	RPUSD4	93	82.228	Pan_paniscus
ENSAMEG00000000127	-	100	88.594	ENSPPRG00000003081	RPUSD4	100	88.594	Panthera_pardus
ENSAMEG00000000127	-	100	88.594	ENSPTIG00000012059	RPUSD4	100	88.594	Panthera_tigris_altaica
ENSAMEG00000000127	-	100	81.963	ENSPTRG00000004454	RPUSD4	100	81.963	Pan_troglodytes
ENSAMEG00000000127	-	100	82.228	ENSPANG00000015040	RPUSD4	100	82.228	Papio_anubis
ENSAMEG00000000127	-	89	56.805	ENSPKIG00000023986	rpusd4	86	56.805	Paramormyrops_kingsleyae
ENSAMEG00000000127	-	79	66.333	ENSPSIG00000014268	RPUSD4	95	66.333	Pelodiscus_sinensis
ENSAMEG00000000127	-	85	50.920	ENSPMGG00000002806	rpusd4	90	50.920	Periophthalmus_magnuspinnatus
ENSAMEG00000000127	-	100	74.005	ENSPEMG00000000278	Rpusd4	100	74.005	Peromyscus_maniculatus_bairdii
ENSAMEG00000000127	-	80	46.567	ENSPMAG00000008183	rpusd4	97	46.567	Petromyzon_marinus
ENSAMEG00000000127	-	97	71.154	ENSPCIG00000010212	RPUSD4	100	71.154	Phascolarctos_cinereus
ENSAMEG00000000127	-	90	48.857	ENSPFOG00000019030	rpusd4	91	48.857	Poecilia_formosa
ENSAMEG00000000127	-	90	49.425	ENSPLAG00000016848	rpusd4	88	49.425	Poecilia_latipinna
ENSAMEG00000000127	-	90	48.851	ENSPMEG00000017534	rpusd4	88	48.851	Poecilia_mexicana
ENSAMEG00000000127	-	87	48.665	ENSPREG00000005689	rpusd4	87	48.665	Poecilia_reticulata
ENSAMEG00000000127	-	100	82.228	ENSPPYG00000004043	RPUSD4	100	82.228	Pongo_abelii
ENSAMEG00000000127	-	80	78.261	ENSPCAG00000000753	RPUSD4	81	78.261	Procavia_capensis
ENSAMEG00000000127	-	98	77.358	ENSPCOG00000020694	RPUSD4	100	77.358	Propithecus_coquereli
ENSAMEG00000000127	-	99	83.602	ENSPVAG00000000988	RPUSD4	99	83.602	Pteropus_vampyrus
ENSAMEG00000000127	-	89	51.032	ENSPNYG00000009652	rpusd4	86	51.032	Pundamilia_nyererei
ENSAMEG00000000127	-	88	51.796	ENSPNAG00000012264	rpusd4	88	51.796	Pygocentrus_nattereri
ENSAMEG00000000127	-	100	79.045	ENSRNOG00000011567	Rpusd4	100	79.045	Rattus_norvegicus
ENSAMEG00000000127	-	100	81.698	ENSRBIG00000034842	RPUSD4	100	81.698	Rhinopithecus_bieti
ENSAMEG00000000127	-	100	81.698	ENSRROG00000039753	RPUSD4	100	81.698	Rhinopithecus_roxellana
ENSAMEG00000000127	-	98	81.402	ENSSBOG00000030413	RPUSD4	99	81.402	Saimiri_boliviensis_boliviensis
ENSAMEG00000000127	-	80	75.748	ENSSHAG00000008304	RPUSD4	99	75.748	Sarcophilus_harrisii
ENSAMEG00000000127	-	88	56.637	ENSSFOG00015006203	rpusd4	92	56.471	Scleropages_formosus
ENSAMEG00000000127	-	89	50.000	ENSSMAG00000020978	rpusd4	88	50.000	Scophthalmus_maximus
ENSAMEG00000000127	-	87	48.657	ENSSDUG00000013399	rpusd4	88	48.657	Seriola_dumerili
ENSAMEG00000000127	-	87	48.358	ENSSLDG00000023507	rpusd4	88	48.358	Seriola_lalandi_dorsalis
ENSAMEG00000000127	-	89	61.176	ENSSPUG00000001401	RPUSD4	94	62.059	Sphenodon_punctatus
ENSAMEG00000000127	-	86	54.079	ENSSPAG00000012163	rpusd4	85	54.079	Stegastes_partitus
ENSAMEG00000000127	-	98	85.714	ENSSSCG00000015233	RPUSD4	98	85.714	Sus_scrofa
ENSAMEG00000000127	-	79	60.667	ENSTGUG00000000773	RPUSD4	100	60.667	Taeniopygia_guttata
ENSAMEG00000000127	-	86	51.818	ENSTRUG00000012283	rpusd4	84	51.818	Takifugu_rubripes
ENSAMEG00000000127	-	86	51.818	ENSTNIG00000014676	rpusd4	84	51.818	Tetraodon_nigroviridis
ENSAMEG00000000127	-	100	83.289	ENSTTRG00000001555	RPUSD4	100	83.289	Tursiops_truncatus
ENSAMEG00000000127	-	100	97.878	ENSUMAG00000002219	RPUSD4	100	97.878	Ursus_maritimus
ENSAMEG00000000127	-	70	85.660	ENSVPAG00000001066	RPUSD4	100	85.660	Vicugna_pacos
ENSAMEG00000000127	-	100	88.095	ENSVVUG00000020101	RPUSD4	100	88.095	Vulpes_vulpes
ENSAMEG00000000127	-	86	50.301	ENSXCOG00000004676	rpusd4	86	50.000	Xiphophorus_couchianus
ENSAMEG00000000127	-	86	50.301	ENSXMAG00000023351	rpusd4	84	50.301	Xiphophorus_maculatus