EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000000129 (Gene tree)
Gene ID: 100479652
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 6400 bases
Position: chrGL192507.1:1021791-1028190
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000000139	EXOSC1	PF10447.9	3.9e-15	1	1
ENSAMEP00000000139	ECR1_N	PF14382.6	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000000143	EXOSC1-201	588	-	ENSAMEP00000000139	195 (aa)	-	D2H5L0

Gene Model

Click here to download ENSAMEG00000000129's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000000129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000000129	EXOSC1	100	97.436	ENSG00000171311	EXOSC1	100	97.436	Homo_sapiens
ENSAMEG00000000129	EXOSC1	98	80.628	ENSAPOG00000007822	exosc1	98	80.628	Acanthochromis_polyacanthus
ENSAMEG00000000129	EXOSC1	96	80.319	ENSACIG00000018956	exosc1	92	80.319	Amphilophus_citrinellus
ENSAMEG00000000129	EXOSC1	98	80.628	ENSAOCG00000010699	exosc1	98	80.628	Amphiprion_ocellaris
ENSAMEG00000000129	EXOSC1	92	71.508	ENSAPEG00000012690	exosc1	96	71.508	Amphiprion_percula
ENSAMEG00000000129	EXOSC1	98	80.105	ENSATEG00000018683	exosc1	98	80.105	Anabas_testudineus
ENSAMEG00000000129	EXOSC1	99	86.010	ENSACAG00000002101	EXOSC1	99	86.010	Anolis_carolinensis
ENSAMEG00000000129	EXOSC1	100	98.974	ENSANAG00000034669	EXOSC1	100	98.974	Aotus_nancymaae
ENSAMEG00000000129	EXOSC1	98	80.628	ENSACLG00000021243	exosc1	98	80.628	Astatotilapia_calliptera
ENSAMEG00000000129	EXOSC1	98	82.199	ENSAMXG00000011116	exosc1	98	82.199	Astyanax_mexicanus
ENSAMEG00000000129	EXOSC1	100	99.487	ENSBTAG00000012699	EXOSC1	100	99.487	Bos_taurus
ENSAMEG00000000129	EXOSC1	92	33.511	WBGene00012966	exos-1	90	33.511	Caenorhabditis_elegans
ENSAMEG00000000129	EXOSC1	100	98.462	ENSCJAG00000016586	EXOSC1	100	98.462	Callithrix_jacchus
ENSAMEG00000000129	EXOSC1	100	99.487	ENSCAFG00000009068	EXOSC1	94	99.487	Canis_familiaris
ENSAMEG00000000129	EXOSC1	100	99.487	ENSCAFG00020006002	EXOSC1	94	99.487	Canis_lupus_dingo
ENSAMEG00000000129	EXOSC1	100	99.487	ENSCHIG00000015253	EXOSC1	100	99.487	Capra_hircus
ENSAMEG00000000129	EXOSC1	100	97.949	ENSTSYG00000000760	EXOSC1	100	97.949	Carlito_syrichta
ENSAMEG00000000129	EXOSC1	100	98.462	ENSCPOG00000001173	EXOSC1	100	98.462	Cavia_porcellus
ENSAMEG00000000129	EXOSC1	100	56.853	ENSCCAG00000023986	EXOSC1	100	56.853	Cebus_capucinus
ENSAMEG00000000129	EXOSC1	100	97.436	ENSCATG00000034114	EXOSC1	100	97.436	Cercocebus_atys
ENSAMEG00000000129	EXOSC1	100	98.974	ENSCLAG00000002463	EXOSC1	100	98.974	Chinchilla_lanigera
ENSAMEG00000000129	EXOSC1	100	96.923	ENSCSAG00000005870	EXOSC1	100	96.923	Chlorocebus_sabaeus
ENSAMEG00000000129	EXOSC1	96	84.492	ENSCHOG00000006477	EXOSC1	100	84.492	Choloepus_hoffmanni
ENSAMEG00000000129	EXOSC1	54	81.132	ENSCPBG00000011949	EXOSC1	88	81.132	Chrysemys_picta_bellii
ENSAMEG00000000129	EXOSC1	95	56.684	ENSCING00000022734	-	89	56.684	Ciona_intestinalis
ENSAMEG00000000129	EXOSC1	95	58.289	ENSCSAVG00000010865	-	95	58.289	Ciona_savignyi
ENSAMEG00000000129	EXOSC1	100	97.436	ENSCANG00000034159	EXOSC1	100	97.436	Colobus_angolensis_palliatus
ENSAMEG00000000129	EXOSC1	100	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSAMEG00000000129	EXOSC1	100	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSAMEG00000000129	EXOSC1	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSAMEG00000000129	EXOSC1	98	76.963	ENSCVAG00000016748	exosc1	98	76.963	Cyprinodon_variegatus
ENSAMEG00000000129	EXOSC1	98	81.152	ENSDARG00000059841	exosc1	98	81.152	Danio_rerio
ENSAMEG00000000129	EXOSC1	75	98.649	ENSDNOG00000007983	EXOSC1	100	98.649	Dasypus_novemcinctus
ENSAMEG00000000129	EXOSC1	100	97.949	ENSDORG00000016528	Exosc1	100	97.949	Dipodomys_ordii
ENSAMEG00000000129	EXOSC1	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSAMEG00000000129	EXOSC1	100	95.897	ENSETEG00000002469	-	100	95.897	Echinops_telfairi
ENSAMEG00000000129	EXOSC1	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSAMEG00000000129	EXOSC1	100	88.718	ENSEASG00005008684	EXOSC1	100	88.718	Equus_asinus_asinus
ENSAMEG00000000129	EXOSC1	61	78.992	ENSECAG00000010621	EXOSC1	71	78.992	Equus_caballus
ENSAMEG00000000129	EXOSC1	100	97.949	ENSEEUG00000005647	EXOSC1	100	97.949	Erinaceus_europaeus
ENSAMEG00000000129	EXOSC1	94	81.522	ENSELUG00000017369	exosc1	81	81.522	Esox_lucius
ENSAMEG00000000129	EXOSC1	100	100.000	ENSFCAG00000040563	EXOSC1	94	100.000	Felis_catus
ENSAMEG00000000129	EXOSC1	100	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSAMEG00000000129	EXOSC1	100	98.974	ENSFDAG00000000846	EXOSC1	100	98.974	Fukomys_damarensis
ENSAMEG00000000129	EXOSC1	98	76.963	ENSFHEG00000009154	exosc1	98	76.963	Fundulus_heteroclitus
ENSAMEG00000000129	EXOSC1	98	80.628	ENSGMOG00000008993	exosc1	98	80.628	Gadus_morhua
ENSAMEG00000000129	EXOSC1	100	72.821	ENSGALG00000039917	EXOSC1	100	86.301	Gallus_gallus
ENSAMEG00000000129	EXOSC1	98	76.963	ENSGAFG00000010265	exosc1	94	76.963	Gambusia_affinis
ENSAMEG00000000129	EXOSC1	98	80.628	ENSGACG00000018936	exosc1	98	80.628	Gasterosteus_aculeatus
ENSAMEG00000000129	EXOSC1	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSAMEG00000000129	EXOSC1	100	85.128	ENSGGOG00000003099	EXOSC1	100	85.128	Gorilla_gorilla
ENSAMEG00000000129	EXOSC1	98	80.628	ENSHBUG00000017857	exosc1	98	80.628	Haplochromis_burtoni
ENSAMEG00000000129	EXOSC1	100	98.462	ENSHGLG00000016927	EXOSC1	100	98.462	Heterocephalus_glaber_female
ENSAMEG00000000129	EXOSC1	100	98.462	ENSHGLG00100012208	EXOSC1	100	98.462	Heterocephalus_glaber_male
ENSAMEG00000000129	EXOSC1	98	79.581	ENSHCOG00000019882	exosc1	98	79.581	Hippocampus_comes
ENSAMEG00000000129	EXOSC1	98	81.152	ENSIPUG00000007685	exosc1	98	81.152	Ictalurus_punctatus
ENSAMEG00000000129	EXOSC1	100	98.974	ENSSTOG00000006615	EXOSC1	100	98.974	Ictidomys_tridecemlineatus
ENSAMEG00000000129	EXOSC1	63	82.787	ENSSTOG00000029860	-	93	82.787	Ictidomys_tridecemlineatus
ENSAMEG00000000129	EXOSC1	100	98.974	ENSJJAG00000013311	Exosc1	100	98.974	Jaculus_jaculus
ENSAMEG00000000129	EXOSC1	98	78.646	ENSKMAG00000001202	exosc1	81	78.646	Kryptolebias_marmoratus
ENSAMEG00000000129	EXOSC1	98	80.105	ENSLBEG00000011448	exosc1	98	80.105	Labrus_bergylta
ENSAMEG00000000129	EXOSC1	98	58.586	ENSLOCG00000003776	exosc1	99	58.586	Lepisosteus_oculatus
ENSAMEG00000000129	EXOSC1	100	97.949	ENSLAFG00000015983	EXOSC1	100	97.949	Loxodonta_africana
ENSAMEG00000000129	EXOSC1	100	97.436	ENSMFAG00000001493	EXOSC1	100	97.436	Macaca_fascicularis
ENSAMEG00000000129	EXOSC1	100	97.436	ENSMMUG00000020028	EXOSC1	100	90.452	Macaca_mulatta
ENSAMEG00000000129	EXOSC1	100	97.436	ENSMNEG00000029816	EXOSC1	100	97.436	Macaca_nemestrina
ENSAMEG00000000129	EXOSC1	100	91.795	ENSMLEG00000027643	EXOSC1	100	91.795	Mandrillus_leucophaeus
ENSAMEG00000000129	EXOSC1	98	81.152	ENSMAMG00000012200	exosc1	98	81.152	Mastacembelus_armatus
ENSAMEG00000000129	EXOSC1	98	80.628	ENSMZEG00005007042	exosc1	98	80.628	Maylandia_zebra
ENSAMEG00000000129	EXOSC1	100	85.641	ENSMAUG00000020462	-	100	85.641	Mesocricetus_auratus
ENSAMEG00000000129	EXOSC1	100	98.462	ENSMICG00000007664	EXOSC1	92	98.462	Microcebus_murinus
ENSAMEG00000000129	EXOSC1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSAMEG00000000129	EXOSC1	100	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSAMEG00000000129	EXOSC1	99	60.825	ENSMMOG00000021403	exosc1	99	60.825	Mola_mola
ENSAMEG00000000129	EXOSC1	100	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSAMEG00000000129	EXOSC1	94	81.522	ENSMALG00000007061	exosc1	92	81.522	Monopterus_albus
ENSAMEG00000000129	EXOSC1	100	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSAMEG00000000129	EXOSC1	100	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSAMEG00000000129	EXOSC1	100	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSAMEG00000000129	EXOSC1	100	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSAMEG00000000129	EXOSC1	100	100.000	ENSMPUG00000017044	EXOSC1	100	100.000	Mustela_putorius_furo
ENSAMEG00000000129	EXOSC1	100	98.462	ENSMLUG00000009228	EXOSC1	100	98.462	Myotis_lucifugus
ENSAMEG00000000129	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSAMEG00000000129	EXOSC1	98	61.257	ENSNBRG00000024007	exosc1	97	61.257	Neolamprologus_brichardi
ENSAMEG00000000129	EXOSC1	100	96.923	ENSNLEG00000013872	EXOSC1	100	96.923	Nomascus_leucogenys
ENSAMEG00000000129	EXOSC1	59	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSAMEG00000000129	EXOSC1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSAMEG00000000129	EXOSC1	100	98.462	ENSODEG00000016709	EXOSC1	100	98.462	Octodon_degus
ENSAMEG00000000129	EXOSC1	98	80.628	ENSONIG00000017683	exosc1	98	80.628	Oreochromis_niloticus
ENSAMEG00000000129	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSAMEG00000000129	EXOSC1	100	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSAMEG00000000129	EXOSC1	100	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSAMEG00000000129	EXOSC1	98	79.167	ENSORLG00000011595	exosc1	98	79.167	Oryzias_latipes
ENSAMEG00000000129	EXOSC1	98	79.167	ENSORLG00020005831	exosc1	98	79.167	Oryzias_latipes_hni
ENSAMEG00000000129	EXOSC1	98	79.167	ENSORLG00015004317	exosc1	98	79.167	Oryzias_latipes_hsok
ENSAMEG00000000129	EXOSC1	98	63.874	ENSOMEG00000013907	exosc1	98	63.874	Oryzias_melastigma
ENSAMEG00000000129	EXOSC1	100	97.949	ENSOGAG00000016259	EXOSC1	100	97.949	Otolemur_garnettii
ENSAMEG00000000129	EXOSC1	100	98.974	ENSOARG00000010136	EXOSC1	100	98.974	Ovis_aries
ENSAMEG00000000129	EXOSC1	100	91.371	ENSPPAG00000039842	EXOSC1	100	91.371	Pan_paniscus
ENSAMEG00000000129	EXOSC1	100	100.000	ENSPPRG00000023366	EXOSC1	100	100.000	Panthera_pardus
ENSAMEG00000000129	EXOSC1	100	100.000	ENSPTIG00000017701	EXOSC1	100	100.000	Panthera_tigris_altaica
ENSAMEG00000000129	EXOSC1	100	97.436	ENSPTRG00000002808	EXOSC1	100	97.436	Pan_troglodytes
ENSAMEG00000000129	EXOSC1	100	97.436	ENSPANG00000021324	EXOSC1	100	97.436	Papio_anubis
ENSAMEG00000000129	EXOSC1	98	81.675	ENSPKIG00000016037	exosc1	98	81.675	Paramormyrops_kingsleyae
ENSAMEG00000000129	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSAMEG00000000129	EXOSC1	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSAMEG00000000129	EXOSC1	100	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSAMEG00000000129	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSAMEG00000000129	EXOSC1	100	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSAMEG00000000129	EXOSC1	98	76.440	ENSPFOG00000006755	exosc1	94	76.440	Poecilia_formosa
ENSAMEG00000000129	EXOSC1	98	76.440	ENSPLAG00000005880	exosc1	98	76.440	Poecilia_latipinna
ENSAMEG00000000129	EXOSC1	98	76.440	ENSPMEG00000015598	exosc1	94	76.440	Poecilia_mexicana
ENSAMEG00000000129	EXOSC1	98	66.146	ENSPREG00000000405	exosc1	93	66.146	Poecilia_reticulata
ENSAMEG00000000129	EXOSC1	100	96.923	ENSPPYG00000002531	EXOSC1	100	96.923	Pongo_abelii
ENSAMEG00000000129	EXOSC1	100	97.949	ENSPCAG00000009135	EXOSC1	100	97.949	Procavia_capensis
ENSAMEG00000000129	EXOSC1	100	92.308	ENSPCOG00000027539	EXOSC1	100	92.308	Propithecus_coquereli
ENSAMEG00000000129	EXOSC1	100	98.974	ENSPVAG00000003372	EXOSC1	100	98.974	Pteropus_vampyrus
ENSAMEG00000000129	EXOSC1	98	80.628	ENSPNYG00000021745	exosc1	98	80.628	Pundamilia_nyererei
ENSAMEG00000000129	EXOSC1	98	81.152	ENSPNAG00000001944	exosc1	98	81.152	Pygocentrus_nattereri
ENSAMEG00000000129	EXOSC1	100	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSAMEG00000000129	EXOSC1	100	97.436	ENSRBIG00000035618	EXOSC1	100	97.436	Rhinopithecus_bieti
ENSAMEG00000000129	EXOSC1	100	97.436	ENSRROG00000032589	EXOSC1	92	97.436	Rhinopithecus_roxellana
ENSAMEG00000000129	EXOSC1	100	98.974	ENSSBOG00000000359	EXOSC1	100	98.974	Saimiri_boliviensis_boliviensis
ENSAMEG00000000129	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSAMEG00000000129	EXOSC1	98	83.246	ENSSFOG00015009069	exosc1	98	83.246	Scleropages_formosus
ENSAMEG00000000129	EXOSC1	97	78.421	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSAMEG00000000129	EXOSC1	98	81.152	ENSSMAG00000003721	exosc1	98	81.152	Scophthalmus_maximus
ENSAMEG00000000129	EXOSC1	98	81.152	ENSSDUG00000002993	exosc1	98	81.152	Seriola_dumerili
ENSAMEG00000000129	EXOSC1	98	81.152	ENSSLDG00000025181	exosc1	98	81.152	Seriola_lalandi_dorsalis
ENSAMEG00000000129	EXOSC1	100	84.615	ENSSARG00000000162	EXOSC1	100	84.615	Sorex_araneus
ENSAMEG00000000129	EXOSC1	99	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSAMEG00000000129	EXOSC1	98	72.251	ENSSPAG00000016792	exosc1	82	72.251	Stegastes_partitus
ENSAMEG00000000129	EXOSC1	100	98.974	ENSSSCG00000010518	EXOSC1	91	98.974	Sus_scrofa
ENSAMEG00000000129	EXOSC1	98	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSAMEG00000000129	EXOSC1	97	74.603	ENSTRUG00000007706	exosc1	98	74.603	Takifugu_rubripes
ENSAMEG00000000129	EXOSC1	97	74.479	ENSTNIG00000014079	exosc1	97	74.479	Tetraodon_nigroviridis
ENSAMEG00000000129	EXOSC1	100	90.256	ENSTBEG00000006011	EXOSC1	100	90.256	Tupaia_belangeri
ENSAMEG00000000129	EXOSC1	94	99.457	ENSTTRG00000009887	EXOSC1	100	99.457	Tursiops_truncatus
ENSAMEG00000000129	EXOSC1	100	83.077	ENSUAMG00000010266	EXOSC1	100	83.077	Ursus_americanus
ENSAMEG00000000129	EXOSC1	100	83.077	ENSUMAG00000022002	EXOSC1	100	83.077	Ursus_maritimus
ENSAMEG00000000129	EXOSC1	100	99.487	ENSVVUG00000023192	EXOSC1	63	99.487	Vulpes_vulpes
ENSAMEG00000000129	EXOSC1	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSAMEG00000000129	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSAMEG00000000129	EXOSC1	98	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus