EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000000238 (Gene tree)
Gene ID: 100477688
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 9342 bases
Position: chrGL194495.1:154626-163967
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000000270	MBD	PF01429.19	2.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000000279	MBD1-201	1983	-	ENSAMEP00000000270	660 (aa)	-	G1L068

Gene Model

Click here to download ENSAMEG00000000238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000000238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000000238	MBD1	96	87.025	ENSG00000141644	MBD1	100	87.658	Homo_sapiens
ENSAMEG00000000238	MBD1	62	44.310	ENSACAG00000006091	-	100	44.310	Anolis_carolinensis
ENSAMEG00000000238	MBD1	96	86.076	ENSANAG00000036253	MBD1	100	86.709	Aotus_nancymaae
ENSAMEG00000000238	MBD1	96	89.557	ENSBTAG00000003801	MBD1	100	89.082	Bos_taurus
ENSAMEG00000000238	MBD1	96	84.783	ENSCJAG00000004959	MBD1	100	85.404	Callithrix_jacchus
ENSAMEG00000000238	MBD1	99	93.930	ENSCAFG00000018928	MBD1	99	93.930	Canis_familiaris
ENSAMEG00000000238	MBD1	95	94.551	ENSCAFG00020024272	MBD1	97	94.551	Canis_lupus_dingo
ENSAMEG00000000238	MBD1	96	88.924	ENSCHIG00000021134	MBD1	100	88.608	Capra_hircus
ENSAMEG00000000238	MBD1	96	86.392	ENSTSYG00000000509	MBD1	100	85.918	Carlito_syrichta
ENSAMEG00000000238	MBD1	95	60.350	ENSCAPG00000015782	MBD1	96	59.873	Cavia_aperea
ENSAMEG00000000238	MBD1	97	67.889	ENSCPOG00000001671	MBD1	97	71.893	Cavia_porcellus
ENSAMEG00000000238	MBD1	97	80.031	ENSCCAG00000034600	MBD1	100	74.842	Cebus_capucinus
ENSAMEG00000000238	MBD1	96	87.342	ENSCATG00000029959	MBD1	100	87.975	Cercocebus_atys
ENSAMEG00000000238	MBD1	98	83.617	ENSCLAG00000007457	MBD1	90	84.038	Chinchilla_lanigera
ENSAMEG00000000238	MBD1	96	83.703	ENSCSAG00000018070	MBD1	100	84.335	Chlorocebus_sabaeus
ENSAMEG00000000238	MBD1	96	87.184	ENSCANG00000033425	MBD1	100	87.816	Colobus_angolensis_palliatus
ENSAMEG00000000238	MBD1	96	71.226	ENSCGRG00001014843	Mbd1	100	70.093	Cricetulus_griseus_chok1gshd
ENSAMEG00000000238	MBD1	95	51.582	ENSCGRG00000014135	Mbd1	96	50.704	Cricetulus_griseus_crigri
ENSAMEG00000000238	MBD1	96	81.804	ENSDNOG00000015998	MBD1	100	82.753	Dasypus_novemcinctus
ENSAMEG00000000238	MBD1	86	73.088	ENSDORG00000013917	Mbd1	97	73.088	Dipodomys_ordii
ENSAMEG00000000238	MBD1	96	91.614	ENSEASG00005003857	MBD1	100	91.614	Equus_asinus_asinus
ENSAMEG00000000238	MBD1	96	90.967	ENSECAG00000011497	MBD1	80	90.967	Equus_caballus
ENSAMEG00000000238	MBD1	96	96.677	ENSFCAG00000015730	MBD1	100	96.677	Felis_catus
ENSAMEG00000000238	MBD1	95	71.132	ENSFDAG00000011085	MBD1	96	70.813	Fukomys_damarensis
ENSAMEG00000000238	MBD1	96	87.025	ENSGGOG00000016966	MBD1	100	87.658	Gorilla_gorilla
ENSAMEG00000000238	MBD1	96	84.494	ENSHGLG00000008740	MBD1	100	84.177	Heterocephalus_glaber_female
ENSAMEG00000000238	MBD1	81	88.961	ENSHGLG00100005198	MBD1	100	88.961	Heterocephalus_glaber_male
ENSAMEG00000000238	MBD1	96	78.816	ENSSTOG00000007780	MBD1	100	78.471	Ictidomys_tridecemlineatus
ENSAMEG00000000238	MBD1	94	64.687	ENSJJAG00000022859	Mbd1	96	65.169	Jaculus_jaculus
ENSAMEG00000000238	MBD1	63	38.571	ENSLACG00000002414	-	52	62.500	Latimeria_chalumnae
ENSAMEG00000000238	MBD1	95	73.132	ENSLAFG00000031328	MBD1	97	73.768	Loxodonta_africana
ENSAMEG00000000238	MBD1	96	87.975	ENSMFAG00000026335	MBD1	100	87.500	Macaca_fascicularis
ENSAMEG00000000238	MBD1	96	87.975	ENSMMUG00000009050	MBD1	100	87.500	Macaca_mulatta
ENSAMEG00000000238	MBD1	96	87.975	ENSMNEG00000038822	MBD1	100	87.500	Macaca_nemestrina
ENSAMEG00000000238	MBD1	96	87.184	ENSMLEG00000043121	MBD1	100	87.816	Mandrillus_leucophaeus
ENSAMEG00000000238	MBD1	96	85.466	ENSMICG00000006414	MBD1	100	85.466	Microcebus_murinus
ENSAMEG00000000238	MBD1	63	41.259	ENSMODG00000001286	-	57	41.355	Monodelphis_domestica
ENSAMEG00000000238	MBD1	95	64.885	ENSMUSG00000024561	Mbd1	97	63.389	Mus_musculus
ENSAMEG00000000238	MBD1	96	64.787	MGP_PahariEiJ_G0019128	Mbd1	100	65.091	Mus_pahari
ENSAMEG00000000238	MBD1	94	66.252	MGP_SPRETEiJ_G0023304	Mbd1	99	65.630	Mus_spretus
ENSAMEG00000000238	MBD1	100	93.939	ENSMPUG00000008843	MBD1	100	93.939	Mustela_putorius_furo
ENSAMEG00000000238	MBD1	97	89.704	ENSMLUG00000008286	MBD1	97	89.236	Myotis_lucifugus
ENSAMEG00000000238	MBD1	94	63.033	ENSNGAG00000011412	Mbd1	96	62.559	Nannospalax_galili
ENSAMEG00000000238	MBD1	96	87.342	ENSNLEG00000011661	-	100	86.867	Nomascus_leucogenys
ENSAMEG00000000238	MBD1	94	65.428	ENSNLEG00000032711	-	88	62.036	Nomascus_leucogenys
ENSAMEG00000000238	MBD1	96	70.253	ENSOPRG00000007647	MBD1	100	70.253	Ochotona_princeps
ENSAMEG00000000238	MBD1	95	67.943	ENSODEG00000018451	MBD1	97	69.872	Octodon_degus
ENSAMEG00000000238	MBD1	82	44.938	ENSOANG00000014593	-	100	46.461	Ornithorhynchus_anatinus
ENSAMEG00000000238	MBD1	96	83.070	ENSOCUG00000006554	MBD1	100	83.070	Oryctolagus_cuniculus
ENSAMEG00000000238	MBD1	100	82.960	ENSOGAG00000003784	MBD1	100	81.886	Otolemur_garnettii
ENSAMEG00000000238	MBD1	99	85.865	ENSOARG00000004218	MBD1	99	85.564	Ovis_aries
ENSAMEG00000000238	MBD1	96	83.386	ENSPPAG00000038886	MBD1	100	84.019	Pan_paniscus
ENSAMEG00000000238	MBD1	96	96.835	ENSPPRG00000021387	MBD1	100	96.835	Panthera_pardus
ENSAMEG00000000238	MBD1	96	96.677	ENSPTIG00000021231	MBD1	100	96.677	Panthera_tigris_altaica
ENSAMEG00000000238	MBD1	96	86.867	ENSPTRG00000010021	MBD1	100	87.500	Pan_troglodytes
ENSAMEG00000000238	MBD1	96	87.025	ENSPANG00000010867	MBD1	100	87.658	Papio_anubis
ENSAMEG00000000238	MBD1	95	57.298	ENSPEMG00000022630	Mbd1	97	57.232	Peromyscus_maniculatus_bairdii
ENSAMEG00000000238	MBD1	92	46.825	ENSPCIG00000027937	-	79	46.044	Phascolarctos_cinereus
ENSAMEG00000000238	MBD1	50	53.261	ENSPFOG00000007511	mbd1b	53	30.538	Poecilia_formosa
ENSAMEG00000000238	MBD1	50	53.261	ENSPLAG00000021258	mbd1b	54	30.538	Poecilia_latipinna
ENSAMEG00000000238	MBD1	53	53.261	ENSPMEG00000024145	mbd1b	52	51.546	Poecilia_mexicana
ENSAMEG00000000238	MBD1	50	53.261	ENSPREG00000021805	mbd1b	54	30.538	Poecilia_reticulata
ENSAMEG00000000238	MBD1	96	84.567	ENSPPYG00000009158	MBD1	92	84.087	Pongo_abelii
ENSAMEG00000000238	MBD1	96	71.632	ENSPCAG00000001648	MBD1	93	87.879	Procavia_capensis
ENSAMEG00000000238	MBD1	96	84.968	ENSPCOG00000012450	MBD1	100	86.222	Propithecus_coquereli
ENSAMEG00000000238	MBD1	95	46.440	ENSRNOG00000024104	Mbd1	87	68.952	Rattus_norvegicus
ENSAMEG00000000238	MBD1	96	80.538	ENSRBIG00000041294	MBD1	100	81.171	Rhinopithecus_bieti
ENSAMEG00000000238	MBD1	96	86.709	ENSRROG00000032517	MBD1	100	87.342	Rhinopithecus_roxellana
ENSAMEG00000000238	MBD1	97	84.485	ENSSBOG00000027169	MBD1	90	83.360	Saimiri_boliviensis_boliviensis
ENSAMEG00000000238	MBD1	74	44.106	ENSSHAG00000003661	-	100	44.332	Sarcophilus_harrisii
ENSAMEG00000000238	MBD1	95	87.981	ENSSSCG00000004516	MBD1	100	85.127	Sus_scrofa
ENSAMEG00000000238	MBD1	62	79.167	ENSTBEG00000012651	-	68	79.167	Tupaia_belangeri
ENSAMEG00000000238	MBD1	96	84.494	ENSTTRG00000015523	MBD1	100	85.285	Tursiops_truncatus
ENSAMEG00000000238	MBD1	95	95.032	ENSUAMG00000004752	MBD1	97	95.032	Ursus_americanus
ENSAMEG00000000238	MBD1	95	97.933	ENSUMAG00000002947	MBD1	100	95.095	Ursus_maritimus
ENSAMEG00000000238	MBD1	50	53.261	ENSXMAG00000005628	mbd1b	53	30.323	Xiphophorus_maculatus