EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000000270 (Gene tree)
Gene ID: 100472182
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 23918 bases
Position: chrGL192686.1:1025036-1048953
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000000293	HAT	PF02184.16	1.1e-41	1	2
ENSAMEP00000000293	HAT	PF02184.16	1.1e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000000303	CRNKL1-201	2484	-	ENSAMEP00000000293	828 (aa)	-	G1L091

Gene Model

Click here to download ENSAMEG00000000270's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000000270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000000270	CRNKL1	99	89.008	ENSG00000101343	CRNKL1	100	97.089	Homo_sapiens
ENSAMEG00000000270	CRNKL1	83	86.569	ENSAPOG00000009705	crnkl1	97	86.418	Acanthochromis_polyacanthus
ENSAMEG00000000270	CRNKL1	81	86.647	ENSACIG00000015267	crnkl1	89	86.547	Amphilophus_citrinellus
ENSAMEG00000000270	CRNKL1	83	86.715	ENSAOCG00000021964	crnkl1	90	86.618	Amphiprion_ocellaris
ENSAMEG00000000270	CRNKL1	83	86.569	ENSAPEG00000015041	crnkl1	90	86.471	Amphiprion_percula
ENSAMEG00000000270	CRNKL1	82	86.618	ENSATEG00000001068	crnkl1	89	86.519	Anabas_testudineus
ENSAMEG00000000270	CRNKL1	83	90.975	ENSAPLG00000013105	CRNKL1	98	92.846	Anas_platyrhynchos
ENSAMEG00000000270	CRNKL1	82	93.119	ENSACAG00000005284	CRNKL1	99	93.068	Anolis_carolinensis
ENSAMEG00000000270	CRNKL1	76	97.943	ENSANAG00000024889	CRNKL1	100	97.943	Aotus_nancymaae
ENSAMEG00000000270	CRNKL1	82	87.740	ENSACLG00000010813	crnkl1	89	87.649	Astatotilapia_calliptera
ENSAMEG00000000270	CRNKL1	80	88.102	ENSAMXG00000018334	crnkl1	92	86.029	Astyanax_mexicanus
ENSAMEG00000000270	CRNKL1	83	98.399	ENSBTAG00000008472	CRNKL1	99	98.399	Bos_taurus
ENSAMEG00000000270	CRNKL1	77	62.364	WBGene00019762	M03F8.3	91	61.765	Caenorhabditis_elegans
ENSAMEG00000000270	CRNKL1	83	97.234	ENSCJAG00000005393	CRNKL1	100	97.234	Callithrix_jacchus
ENSAMEG00000000270	CRNKL1	96	91.635	ENSCAFG00000005333	CRNKL1	99	96.936	Canis_familiaris
ENSAMEG00000000270	CRNKL1	83	99.709	ENSCAFG00020027488	CRNKL1	100	99.709	Canis_lupus_dingo
ENSAMEG00000000270	CRNKL1	83	97.234	ENSCHIG00000013171	CRNKL1	99	97.234	Capra_hircus
ENSAMEG00000000270	CRNKL1	99	84.229	ENSTSYG00000004197	CRNKL1	100	98.253	Carlito_syrichta
ENSAMEG00000000270	CRNKL1	79	96.284	ENSCAPG00000010501	CRNKL1	99	96.284	Cavia_aperea
ENSAMEG00000000270	CRNKL1	83	96.507	ENSCPOG00000004418	CRNKL1	100	96.507	Cavia_porcellus
ENSAMEG00000000270	CRNKL1	83	97.234	ENSCCAG00000027037	CRNKL1	100	97.234	Cebus_capucinus
ENSAMEG00000000270	CRNKL1	99	87.861	ENSCATG00000034247	CRNKL1	100	97.380	Cercocebus_atys
ENSAMEG00000000270	CRNKL1	83	97.234	ENSCLAG00000013859	CRNKL1	100	97.234	Chinchilla_lanigera
ENSAMEG00000000270	CRNKL1	83	97.380	ENSCSAG00000011434	CRNKL1	100	97.380	Chlorocebus_sabaeus
ENSAMEG00000000270	CRNKL1	99	90.097	ENSCHOG00000006371	CRNKL1	99	90.097	Choloepus_hoffmanni
ENSAMEG00000000270	CRNKL1	83	94.161	ENSCPBG00000023501	CRNKL1	99	94.118	Chrysemys_picta_bellii
ENSAMEG00000000270	CRNKL1	80	69.637	ENSCING00000002709	-	99	68.235	Ciona_intestinalis
ENSAMEG00000000270	CRNKL1	99	86.124	ENSCANG00000038789	CRNKL1	100	97.525	Colobus_angolensis_palliatus
ENSAMEG00000000270	CRNKL1	83	98.108	ENSCGRG00001001115	-	99	98.108	Cricetulus_griseus_chok1gshd
ENSAMEG00000000270	CRNKL1	83	98.108	ENSCGRG00001000687	-	99	98.108	Cricetulus_griseus_chok1gshd
ENSAMEG00000000270	CRNKL1	83	98.108	ENSCGRG00000007854	Crnkl1	99	98.108	Cricetulus_griseus_crigri
ENSAMEG00000000270	CRNKL1	82	86.370	ENSCSEG00000005594	crnkl1	85	86.269	Cynoglossus_semilaevis
ENSAMEG00000000270	CRNKL1	80	87.688	ENSCVAG00000015172	crnkl1	92	85.588	Cyprinodon_variegatus
ENSAMEG00000000270	CRNKL1	80	87.160	ENSDARG00000007901	crnkl1	90	85.714	Danio_rerio
ENSAMEG00000000270	CRNKL1	83	99.123	ENSDNOG00000016226	CRNKL1	95	99.123	Dasypus_novemcinctus
ENSAMEG00000000270	CRNKL1	81	88.507	ENSDORG00000023724	-	98	88.989	Dipodomys_ordii
ENSAMEG00000000270	CRNKL1	83	96.681	ENSDORG00000000394	-	100	96.681	Dipodomys_ordii
ENSAMEG00000000270	CRNKL1	81	88.060	ENSDORG00000030174	-	98	88.235	Dipodomys_ordii
ENSAMEG00000000270	CRNKL1	80	69.670	FBgn0000377	crn	95	69.670	Drosophila_melanogaster
ENSAMEG00000000270	CRNKL1	99	77.415	ENSETEG00000003711	CRNKL1	96	79.924	Echinops_telfairi
ENSAMEG00000000270	CRNKL1	82	61.155	ENSEBUG00000013461	crnkl1	95	58.616	Eptatretus_burgeri
ENSAMEG00000000270	CRNKL1	83	99.709	ENSEASG00005002072	CRNKL1	100	99.709	Equus_asinus_asinus
ENSAMEG00000000270	CRNKL1	83	99.709	ENSECAG00000022215	CRNKL1	100	99.709	Equus_caballus
ENSAMEG00000000270	CRNKL1	89	92.982	ENSEEUG00000000413	CRNKL1	99	92.982	Erinaceus_europaeus
ENSAMEG00000000270	CRNKL1	81	86.119	ENSELUG00000015424	crnkl1	97	84.897	Esox_lucius
ENSAMEG00000000270	CRNKL1	83	100.000	ENSFCAG00000000714	CRNKL1	100	100.000	Felis_catus
ENSAMEG00000000270	CRNKL1	81	92.113	ENSFALG00000004611	CRNKL1	100	92.113	Ficedula_albicollis
ENSAMEG00000000270	CRNKL1	83	97.380	ENSFDAG00000000604	CRNKL1	100	97.380	Fukomys_damarensis
ENSAMEG00000000270	CRNKL1	81	86.776	ENSFHEG00000013163	crnkl1	87	86.677	Fundulus_heteroclitus
ENSAMEG00000000270	CRNKL1	81	86.228	ENSGMOG00000007609	crnkl1	94	84.435	Gadus_morhua
ENSAMEG00000000270	CRNKL1	83	94.015	ENSGALG00000008429	CRNKL1	99	93.971	Gallus_gallus
ENSAMEG00000000270	CRNKL1	83	85.444	ENSGAFG00000014249	crnkl1	93	83.711	Gambusia_affinis
ENSAMEG00000000270	CRNKL1	82	85.234	ENSGACG00000011852	crnkl1	90	85.125	Gasterosteus_aculeatus
ENSAMEG00000000270	CRNKL1	79	92.835	ENSGAGG00000021233	CRNKL1	100	93.085	Gopherus_agassizii
ENSAMEG00000000270	CRNKL1	99	88.530	ENSGGOG00000014176	CRNKL1	100	97.089	Gorilla_gorilla
ENSAMEG00000000270	CRNKL1	82	87.592	ENSHBUG00000005246	crnkl1	89	87.500	Haplochromis_burtoni
ENSAMEG00000000270	CRNKL1	83	97.234	ENSHGLG00000010856	CRNKL1	100	97.234	Heterocephalus_glaber_female
ENSAMEG00000000270	CRNKL1	83	97.234	ENSHGLG00100011521	CRNKL1	100	97.234	Heterocephalus_glaber_male
ENSAMEG00000000270	CRNKL1	81	84.708	ENSHCOG00000006420	crnkl1	97	83.161	Hippocampus_comes
ENSAMEG00000000270	CRNKL1	80	76.241	ENSIPUG00000006836	-	98	75.635	Ictalurus_punctatus
ENSAMEG00000000270	CRNKL1	77	68.917	ENSIPUG00000000315	-	99	70.270	Ictalurus_punctatus
ENSAMEG00000000270	CRNKL1	78	87.827	ENSIPUG00000006751	crnkl1	93	85.970	Ictalurus_punctatus
ENSAMEG00000000270	CRNKL1	83	98.544	ENSSTOG00000014747	CRNKL1	100	98.544	Ictidomys_tridecemlineatus
ENSAMEG00000000270	CRNKL1	83	96.302	ENSJJAG00000016926	Crnkl1	100	96.302	Jaculus_jaculus
ENSAMEG00000000270	CRNKL1	82	86.657	ENSKMAG00000003620	crnkl1	86	86.558	Kryptolebias_marmoratus
ENSAMEG00000000270	CRNKL1	80	71.280	ENSLBEG00000003543	crnkl1	91	71.134	Labrus_bergylta
ENSAMEG00000000270	CRNKL1	82	88.141	ENSLACG00000001129	CRNKL1	99	88.053	Latimeria_chalumnae
ENSAMEG00000000270	CRNKL1	80	89.458	ENSLOCG00000016889	crnkl1	94	87.923	Lepisosteus_oculatus
ENSAMEG00000000270	CRNKL1	83	98.983	ENSLAFG00000004512	CRNKL1	100	98.983	Loxodonta_africana
ENSAMEG00000000270	CRNKL1	99	87.277	ENSMFAG00000039893	CRNKL1	100	97.380	Macaca_fascicularis
ENSAMEG00000000270	CRNKL1	99	87.232	ENSMMUG00000007709	CRNKL1	100	97.380	Macaca_mulatta
ENSAMEG00000000270	CRNKL1	99	87.039	ENSMNEG00000037490	CRNKL1	100	97.380	Macaca_nemestrina
ENSAMEG00000000270	CRNKL1	99	86.754	ENSMLEG00000034885	CRNKL1	100	97.380	Mandrillus_leucophaeus
ENSAMEG00000000270	CRNKL1	83	86.277	ENSMAMG00000008757	crnkl1	90	86.176	Mastacembelus_armatus
ENSAMEG00000000270	CRNKL1	82	87.740	ENSMZEG00005022345	crnkl1	89	87.649	Maylandia_zebra
ENSAMEG00000000270	CRNKL1	83	93.294	ENSMGAG00000003452	CRNKL1	93	93.245	Meleagris_gallopavo
ENSAMEG00000000270	CRNKL1	83	97.962	ENSMAUG00000020764	Crnkl1	99	97.962	Mesocricetus_auratus
ENSAMEG00000000270	CRNKL1	83	98.690	ENSMICG00000006048	CRNKL1	100	98.690	Microcebus_murinus
ENSAMEG00000000270	CRNKL1	80	69.520	ENSMOCG00000004179	-	95	69.865	Microtus_ochrogaster
ENSAMEG00000000270	CRNKL1	83	89.986	ENSMOCG00000000681	-	99	89.986	Microtus_ochrogaster
ENSAMEG00000000270	CRNKL1	76	86.212	ENSMMOG00000017601	crnkl1	96	86.102	Mola_mola
ENSAMEG00000000270	CRNKL1	83	86.900	ENSMODG00000010857	-	98	87.334	Monodelphis_domestica
ENSAMEG00000000270	CRNKL1	84	92.593	ENSMODG00000005961	-	98	93.033	Monodelphis_domestica
ENSAMEG00000000270	CRNKL1	81	63.947	ENSMALG00000011211	crnkl1	87	69.208	Monopterus_albus
ENSAMEG00000000270	CRNKL1	83	98.544	MGP_CAROLIEiJ_G0024394	Crnkl1	99	98.544	Mus_caroli
ENSAMEG00000000270	CRNKL1	83	98.690	ENSMUSG00000001767	Crnkl1	99	98.690	Mus_musculus
ENSAMEG00000000270	CRNKL1	83	96.652	MGP_PahariEiJ_G0025838	Crnkl1	99	96.652	Mus_pahari
ENSAMEG00000000270	CRNKL1	83	98.544	MGP_SPRETEiJ_G0025312	Crnkl1	99	98.544	Mus_spretus
ENSAMEG00000000270	CRNKL1	83	99.854	ENSMPUG00000001226	CRNKL1	100	99.854	Mustela_putorius_furo
ENSAMEG00000000270	CRNKL1	93	92.692	ENSMLUG00000016513	CRNKL1	99	92.692	Myotis_lucifugus
ENSAMEG00000000270	CRNKL1	83	96.143	ENSNGAG00000023097	Crnkl1	100	96.143	Nannospalax_galili
ENSAMEG00000000270	CRNKL1	82	87.888	ENSNBRG00000007867	crnkl1	89	87.798	Neolamprologus_brichardi
ENSAMEG00000000270	CRNKL1	83	93.741	ENSNLEG00000009862	CRNKL1	99	93.676	Nomascus_leucogenys
ENSAMEG00000000270	CRNKL1	81	96.119	ENSMEUG00000012167	-	100	96.119	Notamacropus_eugenii
ENSAMEG00000000270	CRNKL1	83	86.192	ENSMEUG00000002361	-	99	86.197	Notamacropus_eugenii
ENSAMEG00000000270	CRNKL1	89	67.568	ENSOPRG00000009242	-	82	67.568	Ochotona_princeps
ENSAMEG00000000270	CRNKL1	83	97.089	ENSODEG00000012175	CRNKL1	100	97.089	Octodon_degus
ENSAMEG00000000270	CRNKL1	82	88.183	ENSONIG00000018728	crnkl1	89	88.095	Oreochromis_niloticus
ENSAMEG00000000270	CRNKL1	99	87.380	ENSOCUG00000015484	CRNKL1	98	87.995	Oryctolagus_cuniculus
ENSAMEG00000000270	CRNKL1	80	86.036	ENSORLG00000017240	crnkl1	95	80.584	Oryzias_latipes
ENSAMEG00000000270	CRNKL1	80	86.186	ENSORLG00020001742	crnkl1	89	86.082	Oryzias_latipes_hni
ENSAMEG00000000270	CRNKL1	80	86.186	ENSORLG00015019564	crnkl1	88	86.082	Oryzias_latipes_hsok
ENSAMEG00000000270	CRNKL1	83	85.109	ENSOMEG00000019895	crnkl1	91	85.000	Oryzias_melastigma
ENSAMEG00000000270	CRNKL1	83	97.671	ENSOGAG00000011544	CRNKL1	100	97.671	Otolemur_garnettii
ENSAMEG00000000270	CRNKL1	92	95.413	ENSOARG00000002150	CRNKL1	99	94.758	Ovis_aries
ENSAMEG00000000270	CRNKL1	99	86.603	ENSPPAG00000027847	CRNKL1	99	86.603	Pan_paniscus
ENSAMEG00000000270	CRNKL1	83	100.000	ENSPPRG00000001955	CRNKL1	100	100.000	Panthera_pardus
ENSAMEG00000000270	CRNKL1	99	90.465	ENSPTIG00000007393	CRNKL1	100	100.000	Panthera_tigris_altaica
ENSAMEG00000000270	CRNKL1	83	96.943	ENSPTRG00000030609	CRNKL1	100	96.943	Pan_troglodytes
ENSAMEG00000000270	CRNKL1	99	85.389	ENSPANG00000017420	CRNKL1	100	97.380	Papio_anubis
ENSAMEG00000000270	CRNKL1	80	83.008	ENSPKIG00000017093	crnkl1	88	82.127	Paramormyrops_kingsleyae
ENSAMEG00000000270	CRNKL1	82	92.972	ENSPSIG00000012705	CRNKL1	99	93.235	Pelodiscus_sinensis
ENSAMEG00000000270	CRNKL1	82	79.912	ENSPMGG00000006263	crnkl1	95	79.525	Periophthalmus_magnuspinnatus
ENSAMEG00000000270	CRNKL1	83	98.108	ENSPEMG00000000073	-	99	98.108	Peromyscus_maniculatus_bairdii
ENSAMEG00000000270	CRNKL1	83	82.413	ENSPMAG00000002250	crnkl1	99	82.284	Petromyzon_marinus
ENSAMEG00000000270	CRNKL1	87	92.265	ENSPCIG00000025825	CRNKL1	99	92.541	Phascolarctos_cinereus
ENSAMEG00000000270	CRNKL1	80	87.087	ENSPFOG00000005102	crnkl1	92	85.066	Poecilia_formosa
ENSAMEG00000000270	CRNKL1	83	85.051	ENSPLAG00000007288	crnkl1	89	84.942	Poecilia_latipinna
ENSAMEG00000000270	CRNKL1	80	87.237	ENSPMEG00000008865	crnkl1	93	85.212	Poecilia_mexicana
ENSAMEG00000000270	CRNKL1	80	86.787	ENSPREG00000012615	crnkl1	91	84.831	Poecilia_reticulata
ENSAMEG00000000270	CRNKL1	99	89.247	ENSPPYG00000010747	CRNKL1	99	89.247	Pongo_abelii
ENSAMEG00000000270	CRNKL1	96	85.912	ENSPCAG00000003296	CRNKL1	98	85.660	Procavia_capensis
ENSAMEG00000000270	CRNKL1	99	87.861	ENSPCOG00000017608	CRNKL1	99	87.861	Propithecus_coquereli
ENSAMEG00000000270	CRNKL1	99	90.854	ENSPVAG00000006207	CRNKL1	99	90.854	Pteropus_vampyrus
ENSAMEG00000000270	CRNKL1	82	87.592	ENSPNYG00000001977	crnkl1	89	87.500	Pundamilia_nyererei
ENSAMEG00000000270	CRNKL1	81	88.657	ENSPNAG00000001507	crnkl1	97	83.871	Pygocentrus_nattereri
ENSAMEG00000000270	CRNKL1	83	98.690	ENSRNOG00000010587	Crnkl1	99	98.690	Rattus_norvegicus
ENSAMEG00000000270	CRNKL1	83	98.253	ENSRNOG00000040045	Crnkl1	99	98.253	Rattus_norvegicus
ENSAMEG00000000270	CRNKL1	83	97.234	ENSRBIG00000031770	CRNKL1	100	97.234	Rhinopithecus_bieti
ENSAMEG00000000270	CRNKL1	83	97.089	ENSRROG00000040450	CRNKL1	100	97.089	Rhinopithecus_roxellana
ENSAMEG00000000270	CRNKL1	78	37.681	YLR117C	CLF1	99	37.771	Saccharomyces_cerevisiae
ENSAMEG00000000270	CRNKL1	99	85.921	ENSSBOG00000029672	CRNKL1	100	97.234	Saimiri_boliviensis_boliviensis
ENSAMEG00000000270	CRNKL1	79	74.810	ENSSHAG00000011199	CRNKL1	99	74.810	Sarcophilus_harrisii
ENSAMEG00000000270	CRNKL1	80	87.915	ENSSFOG00015000946	crnkl1	88	86.156	Scleropages_formosus
ENSAMEG00000000270	CRNKL1	81	86.846	ENSSMAG00000007933	crnkl1	86	86.747	Scophthalmus_maximus
ENSAMEG00000000270	CRNKL1	82	80.412	ENSSDUG00000012625	crnkl1	86	80.267	Seriola_dumerili
ENSAMEG00000000270	CRNKL1	82	87.168	ENSSLDG00000021413	crnkl1	87	87.073	Seriola_lalandi_dorsalis
ENSAMEG00000000270	CRNKL1	99	87.726	ENSSARG00000006443	CRNKL1	99	87.726	Sorex_araneus
ENSAMEG00000000270	CRNKL1	82	93.411	ENSSPUG00000005254	CRNKL1	99	93.363	Sphenodon_punctatus
ENSAMEG00000000270	CRNKL1	80	88.138	ENSSPAG00000016150	crnkl1	85	88.048	Stegastes_partitus
ENSAMEG00000000270	CRNKL1	83	99.709	ENSSSCG00000038587	CRNKL1	99	99.709	Sus_scrofa
ENSAMEG00000000270	CRNKL1	83	92.711	ENSTGUG00000007645	CRNKL1	98	92.658	Taeniopygia_guttata
ENSAMEG00000000270	CRNKL1	81	81.045	ENSTRUG00000015417	crnkl1	89	80.267	Takifugu_rubripes
ENSAMEG00000000270	CRNKL1	80	85.607	ENSTNIG00000010710	crnkl1	99	84.141	Tetraodon_nigroviridis
ENSAMEG00000000270	CRNKL1	93	86.795	ENSTBEG00000001304	CRNKL1	99	86.923	Tupaia_belangeri
ENSAMEG00000000270	CRNKL1	93	87.226	ENSTTRG00000000484	CRNKL1	99	87.226	Tursiops_truncatus
ENSAMEG00000000270	CRNKL1	83	100.000	ENSUAMG00000018586	CRNKL1	100	100.000	Ursus_americanus
ENSAMEG00000000270	CRNKL1	83	100.000	ENSUMAG00000024957	CRNKL1	100	100.000	Ursus_maritimus
ENSAMEG00000000270	CRNKL1	98	88.341	ENSVVUG00000012559	CRNKL1	97	88.341	Vulpes_vulpes
ENSAMEG00000000270	CRNKL1	83	91.121	ENSXETG00000009698	crnkl1	99	91.056	Xenopus_tropicalis
ENSAMEG00000000270	CRNKL1	80	86.357	ENSXCOG00000000824	crnkl1	91	84.513	Xiphophorus_couchianus
ENSAMEG00000000270	CRNKL1	80	87.237	ENSXMAG00000006896	crnkl1	91	85.377	Xiphophorus_maculatus