EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000000432 (Gene tree)
Gene ID: 100482625
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 98176 bases
Position: chrGL193394.1:3217-101392
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000000506	ResIII	PF04851.15	2.1e-11	1	1
ENSAMEP00000000506	DEAD	PF00270.29	3.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000000525	HFM1-201	4320	-	ENSAMEP00000000506	1439 (aa)	-	G1L0V4

Gene Model

Click here to download ENSAMEG00000000432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000000432's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000000432	HFM1	51	35.583	ENSAMEG00000014749	ASCC3	61	35.583
ENSAMEG00000000432	HFM1	58	31.220	ENSAMEG00000008996	SNRNP200	75	31.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000000432	HFM1	100	86.518	ENSG00000162669	HFM1	100	86.518	Homo_sapiens
ENSAMEG00000000432	HFM1	57	67.110	ENSAPOG00000005304	hfm1	93	67.110	Acanthochromis_polyacanthus
ENSAMEG00000000432	HFM1	71	60.327	ENSACIG00000021553	hfm1	92	60.327	Amphilophus_citrinellus
ENSAMEG00000000432	HFM1	57	67.515	ENSAOCG00000022839	hfm1	96	69.105	Amphiprion_ocellaris
ENSAMEG00000000432	HFM1	55	69.279	ENSAPEG00000014316	hfm1	96	69.279	Amphiprion_percula
ENSAMEG00000000432	HFM1	66	64.566	ENSATEG00000019181	hfm1	80	63.716	Anabas_testudineus
ENSAMEG00000000432	HFM1	100	60.231	ENSAPLG00000013639	HFM1	100	60.231	Anas_platyrhynchos
ENSAMEG00000000432	HFM1	100	83.206	ENSANAG00000029513	HFM1	100	83.206	Aotus_nancymaae
ENSAMEG00000000432	HFM1	64	63.558	ENSACLG00000009033	hfm1	96	65.108	Astatotilapia_calliptera
ENSAMEG00000000432	HFM1	85	55.213	ENSAMXG00000006108	hfm1	83	55.213	Astyanax_mexicanus
ENSAMEG00000000432	HFM1	100	87.778	ENSBTAG00000020856	HFM1	100	87.778	Bos_taurus
ENSAMEG00000000432	HFM1	100	85.129	ENSCJAG00000001843	HFM1	100	85.129	Callithrix_jacchus
ENSAMEG00000000432	HFM1	100	92.083	ENSCAFG00000020187	HFM1	100	92.083	Canis_familiaris
ENSAMEG00000000432	HFM1	100	84.386	ENSTSYG00000014250	HFM1	100	84.386	Carlito_syrichta
ENSAMEG00000000432	HFM1	99	79.555	ENSCPOG00000007421	HFM1	99	79.555	Cavia_porcellus
ENSAMEG00000000432	HFM1	100	84.851	ENSCCAG00000033206	HFM1	100	84.851	Cebus_capucinus
ENSAMEG00000000432	HFM1	100	85.823	ENSCATG00000030987	HFM1	100	85.823	Cercocebus_atys
ENSAMEG00000000432	HFM1	100	80.040	ENSCLAG00000005173	HFM1	99	80.040	Chinchilla_lanigera
ENSAMEG00000000432	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSAMEG00000000432	HFM1	100	72.928	ENSCGRG00001016995	Hfm1	100	72.928	Cricetulus_griseus_chok1gshd
ENSAMEG00000000432	HFM1	100	76.944	ENSCGRG00000017181	Hfm1	100	76.944	Cricetulus_griseus_crigri
ENSAMEG00000000432	HFM1	71	59.524	ENSCSEG00000017659	hfm1	93	59.524	Cynoglossus_semilaevis
ENSAMEG00000000432	HFM1	79	54.553	ENSDARG00000104288	hfm1	99	54.553	Danio_rerio
ENSAMEG00000000432	HFM1	100	80.930	ENSDNOG00000004776	HFM1	100	80.930	Dasypus_novemcinctus
ENSAMEG00000000432	HFM1	100	77.076	ENSDORG00000014661	Hfm1	100	77.076	Dipodomys_ordii
ENSAMEG00000000432	HFM1	70	87.882	ENSEASG00005015424	HFM1	97	87.882	Equus_asinus_asinus
ENSAMEG00000000432	HFM1	100	86.734	ENSECAG00000024039	HFM1	100	86.734	Equus_caballus
ENSAMEG00000000432	HFM1	63	67.838	ENSELUG00000018944	hfm1	97	67.838	Esox_lucius
ENSAMEG00000000432	HFM1	100	91.944	ENSFCAG00000029116	HFM1	100	91.944	Felis_catus
ENSAMEG00000000432	HFM1	100	59.864	ENSFALG00000001781	HFM1	100	60.478	Ficedula_albicollis
ENSAMEG00000000432	HFM1	100	78.725	ENSFDAG00000020816	HFM1	100	78.725	Fukomys_damarensis
ENSAMEG00000000432	HFM1	66	61.314	ENSGMOG00000017436	hfm1	100	61.314	Gadus_morhua
ENSAMEG00000000432	HFM1	71	61.748	ENSGAFG00000018093	hfm1	92	67.801	Gambusia_affinis
ENSAMEG00000000432	HFM1	66	61.826	ENSGACG00000015686	hfm1	100	61.826	Gasterosteus_aculeatus
ENSAMEG00000000432	HFM1	100	86.449	ENSGGOG00000038524	HFM1	100	86.449	Gorilla_gorilla
ENSAMEG00000000432	HFM1	64	64.876	ENSHBUG00000007309	hfm1	97	59.528	Haplochromis_burtoni
ENSAMEG00000000432	HFM1	56	64.461	ENSHCOG00000019632	hfm1	97	64.461	Hippocampus_comes
ENSAMEG00000000432	HFM1	70	62.109	ENSIPUG00000017020	hfm1	92	66.110	Ictalurus_punctatus
ENSAMEG00000000432	HFM1	100	77.623	ENSJJAG00000017198	Hfm1	100	77.623	Jaculus_jaculus
ENSAMEG00000000432	HFM1	62	63.193	ENSKMAG00000002282	hfm1	90	63.193	Kryptolebias_marmoratus
ENSAMEG00000000432	HFM1	73	59.117	ENSLBEG00000006759	hfm1	96	65.591	Labrus_bergylta
ENSAMEG00000000432	HFM1	68	69.657	ENSLACG00000010698	HFM1	99	66.792	Latimeria_chalumnae
ENSAMEG00000000432	HFM1	74	64.060	ENSLOCG00000004931	hfm1	99	64.279	Lepisosteus_oculatus
ENSAMEG00000000432	HFM1	52	90.713	ENSLAFG00000015903	-	99	90.713	Loxodonta_africana
ENSAMEG00000000432	HFM1	100	83.079	ENSMFAG00000003649	HFM1	100	83.079	Macaca_fascicularis
ENSAMEG00000000432	HFM1	100	85.546	ENSMMUG00000006819	HFM1	100	85.546	Macaca_mulatta
ENSAMEG00000000432	HFM1	56	68.272	ENSMAMG00000004623	hfm1	98	66.108	Mastacembelus_armatus
ENSAMEG00000000432	HFM1	64	63.558	ENSMZEG00005004679	hfm1	96	65.108	Maylandia_zebra
ENSAMEG00000000432	HFM1	54	78.217	ENSMGAG00000008437	HFM1	98	78.217	Meleagris_gallopavo
ENSAMEG00000000432	HFM1	100	76.960	ENSMAUG00000018858	Hfm1	100	76.960	Mesocricetus_auratus
ENSAMEG00000000432	HFM1	100	85.347	ENSMICG00000037935	HFM1	100	85.347	Microcebus_murinus
ENSAMEG00000000432	HFM1	100	75.261	ENSMOCG00000014812	Hfm1	100	75.261	Microtus_ochrogaster
ENSAMEG00000000432	HFM1	62	64.045	ENSMMOG00000006148	hfm1	96	64.037	Mola_mola
ENSAMEG00000000432	HFM1	65	63.859	ENSMALG00000002401	hfm1	94	66.787	Monopterus_albus
ENSAMEG00000000432	HFM1	95	72.754	MGP_CAROLIEiJ_G0027496	Hfm1	100	72.754	Mus_caroli
ENSAMEG00000000432	HFM1	100	76.372	ENSMUSG00000043410	Hfm1	100	76.372	Mus_musculus
ENSAMEG00000000432	HFM1	100	76.164	MGP_PahariEiJ_G0017268	Hfm1	100	76.164	Mus_pahari
ENSAMEG00000000432	HFM1	100	75.886	MGP_SPRETEiJ_G0028495	Hfm1	100	75.886	Mus_spretus
ENSAMEG00000000432	HFM1	100	89.899	ENSMPUG00000004594	HFM1	100	89.899	Mustela_putorius_furo
ENSAMEG00000000432	HFM1	100	85.160	ENSMLUG00000010200	HFM1	100	85.160	Myotis_lucifugus
ENSAMEG00000000432	HFM1	69	57.115	ENSNBRG00000002910	hfm1	98	64.982	Neolamprologus_brichardi
ENSAMEG00000000432	HFM1	100	82.341	ENSNLEG00000010285	HFM1	100	82.341	Nomascus_leucogenys
ENSAMEG00000000432	HFM1	84	67.816	ENSMEUG00000015788	HFM1	84	67.816	Notamacropus_eugenii
ENSAMEG00000000432	HFM1	84	77.249	ENSOPRG00000013916	HFM1	84	77.249	Ochotona_princeps
ENSAMEG00000000432	HFM1	71	61.716	ENSONIG00000010590	hfm1	100	61.678	Oreochromis_niloticus
ENSAMEG00000000432	HFM1	56	65.517	ENSORLG00000026844	hfm1	99	65.517	Oryzias_latipes
ENSAMEG00000000432	HFM1	74	53.056	ENSORLG00020002951	hfm1	84	53.056	Oryzias_latipes_hni
ENSAMEG00000000432	HFM1	89	51.634	ENSOMEG00000016474	hfm1	90	50.802	Oryzias_melastigma
ENSAMEG00000000432	HFM1	85	88.264	ENSOGAG00000032369	HFM1	99	88.264	Otolemur_garnettii
ENSAMEG00000000432	HFM1	100	87.439	ENSOARG00000015812	HFM1	100	87.439	Ovis_aries
ENSAMEG00000000432	HFM1	92	87.641	ENSPPAG00000024582	HFM1	99	87.641	Pan_paniscus
ENSAMEG00000000432	HFM1	100	92.153	ENSPPRG00000003270	HFM1	100	92.153	Panthera_pardus
ENSAMEG00000000432	HFM1	100	92.014	ENSPTIG00000018881	HFM1	100	92.014	Panthera_tigris_altaica
ENSAMEG00000000432	HFM1	100	86.518	ENSPTRG00000000948	HFM1	100	86.518	Pan_troglodytes
ENSAMEG00000000432	HFM1	100	85.754	ENSPANG00000009838	HFM1	100	85.754	Papio_anubis
ENSAMEG00000000432	HFM1	73	61.085	ENSPKIG00000003810	hfm1	95	68.491	Paramormyrops_kingsleyae
ENSAMEG00000000432	HFM1	57	65.697	ENSPMGG00000011059	hfm1	99	65.697	Periophthalmus_magnuspinnatus
ENSAMEG00000000432	HFM1	100	78.179	ENSPEMG00000022852	Hfm1	100	78.179	Peromyscus_maniculatus_bairdii
ENSAMEG00000000432	HFM1	100	67.404	ENSPCIG00000014233	HFM1	100	67.404	Phascolarctos_cinereus
ENSAMEG00000000432	HFM1	71	62.952	ENSPFOG00000017194	hfm1	99	62.952	Poecilia_formosa
ENSAMEG00000000432	HFM1	71	63.365	ENSPLAG00000000571	hfm1	92	63.365	Poecilia_latipinna
ENSAMEG00000000432	HFM1	71	63.391	ENSPMEG00000019475	hfm1	93	63.391	Poecilia_mexicana
ENSAMEG00000000432	HFM1	71	63.529	ENSPREG00000007803	hfm1	92	67.275	Poecilia_reticulata
ENSAMEG00000000432	HFM1	100	86.310	ENSPPYG00000001163	HFM1	100	86.310	Pongo_abelii
ENSAMEG00000000432	HFM1	74	79.661	ENSPCAG00000004289	-	74	79.661	Procavia_capensis
ENSAMEG00000000432	HFM1	100	78.611	ENSPVAG00000009713	HFM1	100	78.611	Pteropus_vampyrus
ENSAMEG00000000432	HFM1	64	63.451	ENSPNYG00000001795	hfm1	96	65.108	Pundamilia_nyererei
ENSAMEG00000000432	HFM1	59	67.967	ENSPNAG00000010865	hfm1	84	67.967	Pygocentrus_nattereri
ENSAMEG00000000432	HFM1	100	75.400	ENSRNOG00000023299	Hfm1	100	75.400	Rattus_norvegicus
ENSAMEG00000000432	HFM1	100	85.685	ENSRROG00000045569	HFM1	100	85.685	Rhinopithecus_roxellana
ENSAMEG00000000432	HFM1	100	82.766	ENSSBOG00000027456	HFM1	100	82.766	Saimiri_boliviensis_boliviensis
ENSAMEG00000000432	HFM1	60	71.940	ENSSHAG00000014616	-	98	71.940	Sarcophilus_harrisii
ENSAMEG00000000432	HFM1	85	57.325	ENSSFOG00015020129	hfm1	93	57.325	Scleropages_formosus
ENSAMEG00000000432	HFM1	62	65.398	ENSSMAG00000006907	hfm1	86	65.398	Scophthalmus_maximus
ENSAMEG00000000432	HFM1	57	66.303	ENSSDUG00000011424	hfm1	93	66.303	Seriola_dumerili
ENSAMEG00000000432	HFM1	58	66.265	ENSSLDG00000016386	hfm1	92	66.265	Seriola_lalandi_dorsalis
ENSAMEG00000000432	HFM1	68	58.889	ENSSPAG00000001023	hfm1	93	67.636	Stegastes_partitus
ENSAMEG00000000432	HFM1	100	83.838	ENSSSCG00000006912	HFM1	100	83.838	Sus_scrofa
ENSAMEG00000000432	HFM1	66	77.092	ENSTGUG00000006172	HFM1	99	77.092	Taeniopygia_guttata
ENSAMEG00000000432	HFM1	100	83.056	ENSTTRG00000013933	HFM1	100	83.056	Tursiops_truncatus
ENSAMEG00000000432	HFM1	93	88.525	ENSVPAG00000011331	HFM1	93	88.525	Vicugna_pacos
ENSAMEG00000000432	HFM1	70	86.654	ENSVVUG00000020760	HFM1	99	86.654	Vulpes_vulpes
ENSAMEG00000000432	HFM1	57	67.883	ENSXMAG00000004178	hfm1	91	67.883	Xiphophorus_maculatus