EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000000523 (Gene tree)
Gene ID: 100468305
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 50810 bases
Position: chrGL192388.1:767412-818221
Accession: 100468305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000000568	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSAMEP00000000568	RRM_1	PF00076.22	3.6e-40	1	3
ENSAMEP00000000568	RRM_1	PF00076.22	3.6e-40	2	3
ENSAMEP00000000568	RRM_1	PF00076.22	3.6e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000000588	A1CF-201	1779	-	ENSAMEP00000000568	592 (aa)	XP_019649872	D2GZ28

Gene Model

Click here to download ENSAMEG00000000523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000000523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000000523	A1CF	69	68.571	ENSAMEG00000013290	RBM46	77	68.571
ENSAMEG00000000523	A1CF	53	50.625	ENSAMEG00000009537	HNRNPR	50	50.625
ENSAMEG00000000523	A1CF	74	57.395	ENSAMEG00000009672	RBM47	72	57.616
ENSAMEG00000000523	A1CF	52	51.780	ENSAMEG00000015752	SYNCRIP	51	50.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000000523	A1CF	100	95.623	ENSG00000148584	A1CF	100	97.015	Homo_sapiens
ENSAMEG00000000523	A1CF	100	73.378	ENSAPOG00000008259	a1cf	100	72.712	Acanthochromis_polyacanthus
ENSAMEG00000000523	A1CF	100	75.204	ENSACIG00000008632	a1cf	100	75.856	Amphilophus_citrinellus
ENSAMEG00000000523	A1CF	100	73.892	ENSAOCG00000023744	a1cf	96	83.478	Amphiprion_ocellaris
ENSAMEG00000000523	A1CF	100	74.877	ENSAPEG00000009537	a1cf	100	75.041	Amphiprion_percula
ENSAMEG00000000523	A1CF	100	75.407	ENSATEG00000013720	a1cf	100	76.144	Anabas_testudineus
ENSAMEG00000000523	A1CF	100	88.533	ENSAPLG00000002964	A1CF	100	88.027	Anas_platyrhynchos
ENSAMEG00000000523	A1CF	100	83.137	ENSACAG00000015269	A1CF	100	82.462	Anolis_carolinensis
ENSAMEG00000000523	A1CF	100	94.444	ENSANAG00000019974	A1CF	100	94.444	Aotus_nancymaae
ENSAMEG00000000523	A1CF	100	73.235	ENSACLG00000017428	a1cf	100	74.877	Astatotilapia_calliptera
ENSAMEG00000000523	A1CF	100	74.050	ENSAMXG00000018180	a1cf	100	73.719	Astyanax_mexicanus
ENSAMEG00000000523	A1CF	100	93.950	ENSBTAG00000021195	A1CF	100	95.055	Bos_taurus
ENSAMEG00000000523	A1CF	100	96.128	ENSCJAG00000005045	A1CF	100	96.128	Callithrix_jacchus
ENSAMEG00000000523	A1CF	100	97.804	ENSCAFG00000015581	A1CF	100	97.804	Canis_familiaris
ENSAMEG00000000523	A1CF	100	97.804	ENSCAFG00020026421	A1CF	100	97.804	Canis_lupus_dingo
ENSAMEG00000000523	A1CF	100	94.790	ENSCHIG00000020411	A1CF	100	94.454	Capra_hircus
ENSAMEG00000000523	A1CF	95	95.009	ENSTSYG00000001755	A1CF	100	93.918	Carlito_syrichta
ENSAMEG00000000523	A1CF	100	81.288	ENSCAPG00000017386	A1CF	100	81.288	Cavia_aperea
ENSAMEG00000000523	A1CF	100	94.613	ENSCPOG00000009807	A1CF	100	94.613	Cavia_porcellus
ENSAMEG00000000523	A1CF	100	95.953	ENSCCAG00000018168	A1CF	100	95.953	Cebus_capucinus
ENSAMEG00000000523	A1CF	100	94.595	ENSCATG00000043715	A1CF	100	94.595	Cercocebus_atys
ENSAMEG00000000523	A1CF	100	94.295	ENSCLAG00000010424	A1CF	100	93.792	Chinchilla_lanigera
ENSAMEG00000000523	A1CF	100	95.777	ENSCSAG00000007032	A1CF	100	95.777	Chlorocebus_sabaeus
ENSAMEG00000000523	A1CF	98	90.000	ENSCHOG00000009089	A1CF	98	89.661	Choloepus_hoffmanni
ENSAMEG00000000523	A1CF	100	88.027	ENSCPBG00000026464	A1CF	100	87.521	Chrysemys_picta_bellii
ENSAMEG00000000523	A1CF	100	95.946	ENSCANG00000038032	A1CF	100	95.946	Colobus_angolensis_palliatus
ENSAMEG00000000523	A1CF	100	92.773	ENSCGRG00001017413	A1cf	100	92.773	Cricetulus_griseus_chok1gshd
ENSAMEG00000000523	A1CF	100	92.101	ENSCGRG00000017332	A1cf	100	92.941	Cricetulus_griseus_crigri
ENSAMEG00000000523	A1CF	100	74.627	ENSCSEG00000002361	a1cf	100	75.622	Cynoglossus_semilaevis
ENSAMEG00000000523	A1CF	100	74.430	ENSCVAG00000010520	a1cf	100	75.941	Cyprinodon_variegatus
ENSAMEG00000000523	A1CF	100	78.094	ENSDARG00000002968	a1cf	100	79.431	Danio_rerio
ENSAMEG00000000523	A1CF	100	94.622	ENSDNOG00000002829	A1CF	100	94.286	Dasypus_novemcinctus
ENSAMEG00000000523	A1CF	81	91.304	ENSETEG00000012527	A1CF	81	91.304	Echinops_telfairi
ENSAMEG00000000523	A1CF	100	96.482	ENSEASG00005012924	A1CF	100	96.482	Equus_asinus_asinus
ENSAMEG00000000523	A1CF	100	96.147	ENSECAG00000010424	A1CF	100	96.147	Equus_caballus
ENSAMEG00000000523	A1CF	78	80.472	ENSEEUG00000000013	A1CF	96	81.696	Erinaceus_europaeus
ENSAMEG00000000523	A1CF	100	78.261	ENSELUG00000003159	a1cf	100	78.930	Esox_lucius
ENSAMEG00000000523	A1CF	100	95.101	ENSFCAG00000011179	A1CF	100	95.101	Felis_catus
ENSAMEG00000000523	A1CF	100	86.172	ENSFALG00000013183	A1CF	100	85.497	Ficedula_albicollis
ENSAMEG00000000523	A1CF	100	92.437	ENSFDAG00000019371	A1CF	100	91.933	Fukomys_damarensis
ENSAMEG00000000523	A1CF	100	69.870	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSAMEG00000000523	A1CF	100	71.736	ENSGMOG00000018943	a1cf	100	71.310	Gadus_morhua
ENSAMEG00000000523	A1CF	95	88.256	ENSGALG00000003765	A1CF	97	87.544	Gallus_gallus
ENSAMEG00000000523	A1CF	100	69.901	ENSGAFG00000014868	a1cf	100	70.066	Gambusia_affinis
ENSAMEG00000000523	A1CF	100	73.520	ENSGACG00000010241	a1cf	100	73.849	Gasterosteus_aculeatus
ENSAMEG00000000523	A1CF	94	87.857	ENSGAGG00000016508	A1CF	97	87.321	Gopherus_agassizii
ENSAMEG00000000523	A1CF	100	95.791	ENSGGOG00000009670	A1CF	100	94.949	Gorilla_gorilla
ENSAMEG00000000523	A1CF	100	73.899	ENSHBUG00000021959	a1cf	100	76.059	Haplochromis_burtoni
ENSAMEG00000000523	A1CF	100	94.622	ENSHGLG00000008955	A1CF	100	94.118	Heterocephalus_glaber_female
ENSAMEG00000000523	A1CF	100	93.950	ENSHGLG00100000518	A1CF	100	93.445	Heterocephalus_glaber_male
ENSAMEG00000000523	A1CF	100	69.771	ENSHCOG00000017669	a1cf	100	71.941	Hippocampus_comes
ENSAMEG00000000523	A1CF	90	82.649	ENSIPUG00000010367	a1cf	95	83.083	Ictalurus_punctatus
ENSAMEG00000000523	A1CF	100	76.423	ENSKMAG00000006568	a1cf	100	76.585	Kryptolebias_marmoratus
ENSAMEG00000000523	A1CF	99	75.123	ENSLBEG00000020994	a1cf	98	75.947	Labrus_bergylta
ENSAMEG00000000523	A1CF	100	81.376	ENSLACG00000008061	A1CF	100	81.208	Latimeria_chalumnae
ENSAMEG00000000523	A1CF	100	81.407	ENSLOCG00000006302	a1cf	100	81.240	Lepisosteus_oculatus
ENSAMEG00000000523	A1CF	100	93.782	ENSLAFG00000015462	A1CF	100	93.277	Loxodonta_africana
ENSAMEG00000000523	A1CF	100	94.764	ENSMFAG00000035948	A1CF	100	94.764	Macaca_fascicularis
ENSAMEG00000000523	A1CF	100	94.764	ENSMMUG00000007077	A1CF	100	94.764	Macaca_mulatta
ENSAMEG00000000523	A1CF	100	94.426	ENSMNEG00000031454	A1CF	100	94.426	Macaca_nemestrina
ENSAMEG00000000523	A1CF	100	95.946	ENSMLEG00000037223	A1CF	100	95.946	Mandrillus_leucophaeus
ENSAMEG00000000523	A1CF	100	72.995	ENSMAMG00000010402	a1cf	100	74.020	Mastacembelus_armatus
ENSAMEG00000000523	A1CF	100	75.879	ENSMZEG00005013245	a1cf	100	77.387	Maylandia_zebra
ENSAMEG00000000523	A1CF	100	88.384	ENSMGAG00000001507	A1CF	100	87.710	Meleagris_gallopavo
ENSAMEG00000000523	A1CF	100	92.269	ENSMAUG00000007422	A1cf	100	92.269	Mesocricetus_auratus
ENSAMEG00000000523	A1CF	100	93.144	ENSMICG00000003377	A1CF	100	93.144	Microcebus_murinus
ENSAMEG00000000523	A1CF	100	92.437	ENSMOCG00000021536	A1cf	100	91.933	Microtus_ochrogaster
ENSAMEG00000000523	A1CF	100	67.652	ENSMMOG00000009422	a1cf	100	69.572	Mola_mola
ENSAMEG00000000523	A1CF	92	88.807	ENSMODG00000016478	A1CF	96	89.753	Monodelphis_domestica
ENSAMEG00000000523	A1CF	100	72.910	ENSMALG00000012992	a1cf	100	72.027	Monopterus_albus
ENSAMEG00000000523	A1CF	100	92.269	MGP_CAROLIEiJ_G0022873	A1cf	100	91.933	Mus_caroli
ENSAMEG00000000523	A1CF	100	92.269	ENSMUSG00000052595	A1cf	99	94.737	Mus_musculus
ENSAMEG00000000523	A1CF	100	91.765	MGP_PahariEiJ_G0014366	A1cf	100	91.261	Mus_pahari
ENSAMEG00000000523	A1CF	100	91.765	MGP_SPRETEiJ_G0023792	A1cf	100	91.429	Mus_spretus
ENSAMEG00000000523	A1CF	100	91.216	ENSMPUG00000016971	A1CF	100	91.216	Mustela_putorius_furo
ENSAMEG00000000523	A1CF	100	94.790	ENSMLUG00000016071	A1CF	100	94.790	Myotis_lucifugus
ENSAMEG00000000523	A1CF	100	93.782	ENSNGAG00000015136	A1cf	100	93.445	Nannospalax_galili
ENSAMEG00000000523	A1CF	100	74.062	ENSNBRG00000001712	a1cf	100	75.367	Neolamprologus_brichardi
ENSAMEG00000000523	A1CF	100	96.303	ENSNLEG00000012028	A1CF	100	96.303	Nomascus_leucogenys
ENSAMEG00000000523	A1CF	94	88.214	ENSMEUG00000015909	A1CF	100	87.857	Notamacropus_eugenii
ENSAMEG00000000523	A1CF	89	84.000	ENSOPRG00000010667	A1CF	96	84.030	Ochotona_princeps
ENSAMEG00000000523	A1CF	100	74.388	ENSONIG00000019105	a1cf	100	75.407	Oreochromis_niloticus
ENSAMEG00000000523	A1CF	78	87.794	ENSOANG00000007360	A1CF	99	87.794	Ornithorhynchus_anatinus
ENSAMEG00000000523	A1CF	100	91.611	ENSOCUG00000011587	A1CF	100	91.779	Oryctolagus_cuniculus
ENSAMEG00000000523	A1CF	100	74.141	ENSORLG00000013342	a1cf	100	74.146	Oryzias_latipes
ENSAMEG00000000523	A1CF	100	75.777	ENSORLG00020000586	a1cf	100	74.673	Oryzias_latipes_hni
ENSAMEG00000000523	A1CF	100	75.614	ENSORLG00015018569	a1cf	100	74.510	Oryzias_latipes_hsok
ENSAMEG00000000523	A1CF	100	74.632	ENSOMEG00000013531	a1cf	100	73.977	Oryzias_melastigma
ENSAMEG00000000523	A1CF	100	94.426	ENSOGAG00000012884	A1CF	100	94.426	Otolemur_garnettii
ENSAMEG00000000523	A1CF	100	94.790	ENSOARG00000013695	A1CF	100	94.622	Ovis_aries
ENSAMEG00000000523	A1CF	97	93.750	ENSPPAG00000028115	A1CF	100	96.964	Pan_paniscus
ENSAMEG00000000523	A1CF	100	96.453	ENSPPRG00000012180	A1CF	100	96.453	Panthera_pardus
ENSAMEG00000000523	A1CF	100	96.453	ENSPTIG00000021223	A1CF	100	96.453	Panthera_tigris_altaica
ENSAMEG00000000523	A1CF	100	95.623	ENSPTRG00000002508	A1CF	100	94.781	Pan_troglodytes
ENSAMEG00000000523	A1CF	100	94.764	ENSPANG00000021988	A1CF	100	94.764	Papio_anubis
ENSAMEG00000000523	A1CF	100	80.268	ENSPKIG00000025176	a1cf	100	79.933	Paramormyrops_kingsleyae
ENSAMEG00000000523	A1CF	100	86.341	ENSPSIG00000010318	A1CF	100	86.003	Pelodiscus_sinensis
ENSAMEG00000000523	A1CF	89	70.667	ENSPMGG00000013359	a1cf	99	66.895	Periophthalmus_magnuspinnatus
ENSAMEG00000000523	A1CF	100	93.782	ENSPEMG00000015021	A1cf	100	93.277	Peromyscus_maniculatus_bairdii
ENSAMEG00000000523	A1CF	100	88.196	ENSPCIG00000002175	A1CF	100	87.858	Phascolarctos_cinereus
ENSAMEG00000000523	A1CF	100	75.733	ENSPFOG00000006683	a1cf	100	76.384	Poecilia_formosa
ENSAMEG00000000523	A1CF	100	75.570	ENSPFOG00000007437	-	100	76.221	Poecilia_formosa
ENSAMEG00000000523	A1CF	100	74.430	ENSPLAG00000000026	a1cf	100	75.081	Poecilia_latipinna
ENSAMEG00000000523	A1CF	100	74.430	ENSPLAG00000001210	-	100	75.081	Poecilia_latipinna
ENSAMEG00000000523	A1CF	100	66.993	ENSPMEG00000000921	a1cf	100	67.647	Poecilia_mexicana
ENSAMEG00000000523	A1CF	100	68.137	ENSPMEG00000015529	-	100	68.791	Poecilia_mexicana
ENSAMEG00000000523	A1CF	100	75.733	ENSPREG00000016298	a1cf	100	76.221	Poecilia_reticulata
ENSAMEG00000000523	A1CF	100	94.790	ENSPPYG00000002819	A1CF	100	94.790	Pongo_abelii
ENSAMEG00000000523	A1CF	79	73.093	ENSPCAG00000006463	A1CF	79	73.093	Procavia_capensis
ENSAMEG00000000523	A1CF	100	94.966	ENSPCOG00000024172	A1CF	100	94.799	Propithecus_coquereli
ENSAMEG00000000523	A1CF	100	75.204	ENSPNYG00000017944	a1cf	100	77.362	Pundamilia_nyererei
ENSAMEG00000000523	A1CF	100	79.305	ENSPNAG00000007704	a1cf	100	78.808	Pygocentrus_nattereri
ENSAMEG00000000523	A1CF	100	91.261	ENSRNOG00000033195	A1cf	100	90.924	Rattus_norvegicus
ENSAMEG00000000523	A1CF	100	89.394	ENSRBIG00000042892	A1CF	100	92.717	Rhinopithecus_bieti
ENSAMEG00000000523	A1CF	100	96.115	ENSRROG00000041398	A1CF	100	96.115	Rhinopithecus_roxellana
ENSAMEG00000000523	A1CF	100	95.798	ENSSBOG00000021930	A1CF	100	94.958	Saimiri_boliviensis_boliviensis
ENSAMEG00000000523	A1CF	100	88.870	ENSSHAG00000005096	A1CF	100	88.870	Sarcophilus_harrisii
ENSAMEG00000000523	A1CF	100	78.275	ENSSFOG00015011774	a1cf	100	78.109	Scleropages_formosus
ENSAMEG00000000523	A1CF	100	74.267	ENSSMAG00000013271	a1cf	100	73.941	Scophthalmus_maximus
ENSAMEG00000000523	A1CF	100	75.954	ENSSDUG00000013930	a1cf	100	76.373	Seriola_dumerili
ENSAMEG00000000523	A1CF	100	68.977	ENSSLDG00000004290	a1cf	100	69.536	Seriola_lalandi_dorsalis
ENSAMEG00000000523	A1CF	95	83.392	ENSSARG00000005940	A1CF	96	82.686	Sorex_araneus
ENSAMEG00000000523	A1CF	95	87.456	ENSSPUG00000006797	A1CF	95	86.926	Sphenodon_punctatus
ENSAMEG00000000523	A1CF	100	95.126	ENSSSCG00000010431	A1CF	100	94.790	Sus_scrofa
ENSAMEG00000000523	A1CF	100	87.458	ENSTGUG00000005090	A1CF	100	87.458	Taeniopygia_guttata
ENSAMEG00000000523	A1CF	100	74.225	ENSTRUG00000001982	a1cf	100	73.246	Takifugu_rubripes
ENSAMEG00000000523	A1CF	100	74.634	ENSTNIG00000003580	a1cf	100	73.821	Tetraodon_nigroviridis
ENSAMEG00000000523	A1CF	97	86.655	ENSTTRG00000013190	A1CF	95	86.308	Tursiops_truncatus
ENSAMEG00000000523	A1CF	100	98.311	ENSUAMG00000020065	A1CF	100	98.311	Ursus_americanus
ENSAMEG00000000523	A1CF	100	99.324	ENSUMAG00000011162	A1CF	100	99.324	Ursus_maritimus
ENSAMEG00000000523	A1CF	87	89.251	ENSVPAG00000006130	A1CF	86	89.060	Vicugna_pacos
ENSAMEG00000000523	A1CF	100	96.284	ENSVVUG00000002504	A1CF	100	96.284	Vulpes_vulpes
ENSAMEG00000000523	A1CF	100	78.727	ENSXETG00000006611	a1cf	100	78.559	Xenopus_tropicalis
ENSAMEG00000000523	A1CF	100	75.574	ENSXCOG00000003302	a1cf	100	75.738	Xiphophorus_couchianus
ENSAMEG00000000523	A1CF	100	76.721	ENSXMAG00000016703	a1cf	100	76.885	Xiphophorus_maculatus