EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000000524 (Gene tree)
Gene ID: 100473635
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 7518 bases
Position: chrGL192794.1:659638-667155
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000000565	RRM_1	PF00076.22	4.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000000585	RBM42-201	1440	-	ENSAMEP00000000565	479 (aa)	-	G1L113

Gene Model

Click here to download ENSAMEG00000000524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000000524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000000524	RBM42	100	97.718	ENSG00000126254	RBM42	100	97.718	Homo_sapiens
ENSAMEG00000000524	RBM42	100	97.495	ENSANAG00000027537	RBM42	100	97.495	Aotus_nancymaae
ENSAMEG00000000524	RBM42	100	97.704	ENSBTAG00000013440	RBM42	100	97.704	Bos_taurus
ENSAMEG00000000524	RBM42	100	96.451	ENSCJAG00000010220	RBM42	100	96.451	Callithrix_jacchus
ENSAMEG00000000524	RBM42	100	92.276	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSAMEG00000000524	RBM42	100	97.077	ENSCHIG00000009518	RBM42	100	97.077	Capra_hircus
ENSAMEG00000000524	RBM42	100	97.708	ENSTSYG00000014688	RBM42	100	97.708	Carlito_syrichta
ENSAMEG00000000524	RBM42	81	97.680	ENSCAPG00000009566	RBM42	99	97.680	Cavia_aperea
ENSAMEG00000000524	RBM42	100	97.286	ENSCPOG00000012365	RBM42	99	97.286	Cavia_porcellus
ENSAMEG00000000524	RBM42	100	98.121	ENSCCAG00000034440	RBM42	100	98.121	Cebus_capucinus
ENSAMEG00000000524	RBM42	100	97.510	ENSCATG00000041924	RBM42	100	97.510	Cercocebus_atys
ENSAMEG00000000524	RBM42	100	96.660	ENSCLAG00000012865	RBM42	99	96.660	Chinchilla_lanigera
ENSAMEG00000000524	RBM42	100	91.286	ENSCSAG00000004422	RBM42	100	91.494	Chlorocebus_sabaeus
ENSAMEG00000000524	RBM42	100	87.683	ENSCANG00000030272	RBM42	100	87.683	Colobus_angolensis_palliatus
ENSAMEG00000000524	RBM42	100	97.077	ENSCGRG00001018540	Rbm42	99	97.077	Cricetulus_griseus_chok1gshd
ENSAMEG00000000524	RBM42	100	96.473	ENSDNOG00000037397	RBM42	100	96.473	Dasypus_novemcinctus
ENSAMEG00000000524	RBM42	100	96.868	ENSDORG00000013001	Rbm42	99	96.868	Dipodomys_ordii
ENSAMEG00000000524	RBM42	71	91.304	ENSETEG00000007878	RBM42	71	91.071	Echinops_telfairi
ENSAMEG00000000524	RBM42	100	92.276	ENSEASG00005001074	RBM42	100	92.276	Equus_asinus_asinus
ENSAMEG00000000524	RBM42	100	92.276	ENSECAG00000018215	RBM42	100	92.276	Equus_caballus
ENSAMEG00000000524	RBM42	100	98.956	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSAMEG00000000524	RBM42	100	95.842	ENSFDAG00000007440	RBM42	99	95.842	Fukomys_damarensis
ENSAMEG00000000524	RBM42	100	97.718	ENSGGOG00000009972	RBM42	100	97.718	Gorilla_gorilla
ENSAMEG00000000524	RBM42	98	95.106	ENSHGLG00000008418	RBM42	99	94.990	Heterocephalus_glaber_female
ENSAMEG00000000524	RBM42	98	95.106	ENSHGLG00100018667	RBM42	99	94.990	Heterocephalus_glaber_male
ENSAMEG00000000524	RBM42	100	96.451	ENSSTOG00000013050	RBM42	100	96.451	Ictidomys_tridecemlineatus
ENSAMEG00000000524	RBM42	100	96.033	ENSJJAG00000010421	Rbm42	99	96.033	Jaculus_jaculus
ENSAMEG00000000524	RBM42	100	95.616	ENSLAFG00000014993	RBM42	99	95.616	Loxodonta_africana
ENSAMEG00000000524	RBM42	100	97.510	ENSMFAG00000002758	RBM42	100	97.510	Macaca_fascicularis
ENSAMEG00000000524	RBM42	100	97.510	ENSMMUG00000018954	RBM42	100	97.510	Macaca_mulatta
ENSAMEG00000000524	RBM42	100	97.510	ENSMNEG00000030009	RBM42	100	97.510	Macaca_nemestrina
ENSAMEG00000000524	RBM42	100	97.510	ENSMLEG00000036119	RBM42	100	97.510	Mandrillus_leucophaeus
ENSAMEG00000000524	RBM42	100	98.330	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSAMEG00000000524	RBM42	100	96.868	ENSMOCG00000000405	Rbm42	99	96.868	Microtus_ochrogaster
ENSAMEG00000000524	RBM42	100	96.868	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.868	Mus_caroli
ENSAMEG00000000524	RBM42	100	96.868	ENSMUSG00000036733	Rbm42	99	96.868	Mus_musculus
ENSAMEG00000000524	RBM42	100	96.868	MGP_PahariEiJ_G0012770	Rbm42	99	96.868	Mus_pahari
ENSAMEG00000000524	RBM42	100	96.868	MGP_SPRETEiJ_G0030632	Rbm42	99	96.868	Mus_spretus
ENSAMEG00000000524	RBM42	100	93.111	ENSMPUG00000006288	RBM42	100	93.111	Mustela_putorius_furo
ENSAMEG00000000524	RBM42	100	97.077	ENSMLUG00000011334	RBM42	100	97.077	Myotis_lucifugus
ENSAMEG00000000524	RBM42	100	96.868	ENSNGAG00000019698	Rbm42	99	96.868	Nannospalax_galili
ENSAMEG00000000524	RBM42	70	97.917	ENSNLEG00000011272	-	94	91.111	Nomascus_leucogenys
ENSAMEG00000000524	RBM42	96	81.466	ENSMEUG00000016300	RBM42	100	80.777	Notamacropus_eugenii
ENSAMEG00000000524	RBM42	100	93.528	ENSOPRG00000001229	RBM42	100	91.649	Ochotona_princeps
ENSAMEG00000000524	RBM42	100	96.868	ENSODEG00000013705	RBM42	99	96.868	Octodon_degus
ENSAMEG00000000524	RBM42	100	90.871	ENSOCUG00000003337	RBM42	100	91.079	Oryctolagus_cuniculus
ENSAMEG00000000524	RBM42	100	97.077	ENSOGAG00000004144	RBM42	100	97.077	Otolemur_garnettii
ENSAMEG00000000524	RBM42	98	89.339	ENSOARG00000004926	RBM42	98	92.678	Ovis_aries
ENSAMEG00000000524	RBM42	100	97.912	ENSPPAG00000037315	RBM42	100	97.912	Pan_paniscus
ENSAMEG00000000524	RBM42	100	98.956	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSAMEG00000000524	RBM42	100	98.539	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSAMEG00000000524	RBM42	100	97.718	ENSPTRG00000010852	RBM42	100	97.718	Pan_troglodytes
ENSAMEG00000000524	RBM42	100	96.868	ENSPANG00000017032	RBM42	100	96.868	Papio_anubis
ENSAMEG00000000524	RBM42	100	97.495	ENSPEMG00000012065	Rbm42	99	97.495	Peromyscus_maniculatus_bairdii
ENSAMEG00000000524	RBM42	100	96.715	ENSPPYG00000009871	RBM42	100	96.715	Pongo_abelii
ENSAMEG00000000524	RBM42	100	84.551	ENSPCAG00000013053	RBM42	100	82.672	Procavia_capensis
ENSAMEG00000000524	RBM42	70	98.806	ENSPCOG00000020672	RBM42	81	98.806	Propithecus_coquereli
ENSAMEG00000000524	RBM42	100	98.747	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSAMEG00000000524	RBM42	100	98.121	ENSPVAG00000012815	RBM42	100	98.121	Pteropus_vampyrus
ENSAMEG00000000524	RBM42	100	97.077	ENSRNOG00000024278	Rbm42	99	97.077	Rattus_norvegicus
ENSAMEG00000000524	RBM42	100	97.510	ENSRBIG00000007566	RBM42	100	97.510	Rhinopithecus_bieti
ENSAMEG00000000524	RBM42	100	97.912	ENSRROG00000042313	RBM42	100	97.912	Rhinopithecus_roxellana
ENSAMEG00000000524	RBM42	85	98.529	ENSSBOG00000030666	RBM42	100	98.529	Saimiri_boliviensis_boliviensis
ENSAMEG00000000524	RBM42	100	87.137	ENSSARG00000010724	RBM42	100	87.137	Sorex_araneus
ENSAMEG00000000524	RBM42	100	97.077	ENSSSCG00000002905	RBM42	100	97.077	Sus_scrofa
ENSAMEG00000000524	RBM42	100	99.374	ENSUAMG00000020711	RBM42	100	99.374	Ursus_americanus
ENSAMEG00000000524	RBM42	100	99.374	ENSUMAG00000020223	RBM42	100	99.374	Ursus_maritimus
ENSAMEG00000000524	RBM42	100	97.077	ENSVVUG00000015117	RBM42	100	97.077	Vulpes_vulpes