EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000000556 (Gene tree)
Gene ID: 100465560
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 31327 bases
Position: chrGL192374.1:3078259-3109585
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000000595	POP1	PF06978.11	1.1e-36	1	2
ENSAMEP00000000595	POP1	PF06978.11	1.1e-36	2	2
ENSAMEP00000000593	POP1	PF06978.11	1.2e-36	1	2
ENSAMEP00000000593	POP1	PF06978.11	1.2e-36	2	2
ENSAMEP00000000595	POPLD	PF08170.12	1.6e-25	1	1
ENSAMEP00000000593	POPLD	PF08170.12	1.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000000613	POP1-201	3162	-	ENSAMEP00000000593	1053 (aa)	-	G1L141
ENSAMET00000000615	POP1-202	3072	-	ENSAMEP00000000595	1023 (aa)	-	G1L143

Gene Model

Click here to download ENSAMEG00000000556's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03008	Ribosome biogenesis in eukaryotes	KEGG
aml03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000000556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000000556	POP1	100	80.971	ENSG00000104356	POP1	100	85.714	Homo_sapiens
ENSAMEG00000000556	POP1	100	47.871	ENSAPOG00000008198	pop1	100	47.871	Acanthochromis_polyacanthus
ENSAMEG00000000556	POP1	90	49.414	ENSACIG00000004169	POP1	100	46.411	Amphilophus_citrinellus
ENSAMEG00000000556	POP1	100	47.438	ENSAOCG00000010991	pop1	100	47.818	Amphiprion_ocellaris
ENSAMEG00000000556	POP1	91	46.875	ENSAPEG00000007607	pop1	96	47.188	Amphiprion_percula
ENSAMEG00000000556	POP1	100	45.806	ENSATEG00000024814	POP1	100	45.420	Anabas_testudineus
ENSAMEG00000000556	POP1	92	62.394	ENSAPLG00000014418	POP1	99	62.354	Anas_platyrhynchos
ENSAMEG00000000556	POP1	100	55.566	ENSACAG00000016083	POP1	100	55.566	Anolis_carolinensis
ENSAMEG00000000556	POP1	89	84.548	ENSANAG00000026360	POP1	100	84.548	Aotus_nancymaae
ENSAMEG00000000556	POP1	100	47.524	ENSACLG00000010951	pop1	100	47.810	Astatotilapia_calliptera
ENSAMEG00000000556	POP1	100	45.948	ENSAMXG00000014483	POP1	100	45.580	Astyanax_mexicanus
ENSAMEG00000000556	POP1	100	79.863	ENSBTAG00000012596	POP1	100	79.863	Bos_taurus
ENSAMEG00000000556	POP1	100	79.223	ENSCJAG00000015567	POP1	100	79.223	Callithrix_jacchus
ENSAMEG00000000556	POP1	100	86.119	ENSCAFG00000000469	POP1	100	86.119	Canis_familiaris
ENSAMEG00000000556	POP1	100	87.683	ENSCAFG00020026765	POP1	100	87.683	Canis_lupus_dingo
ENSAMEG00000000556	POP1	100	79.883	ENSCHIG00000017066	POP1	100	79.883	Capra_hircus
ENSAMEG00000000556	POP1	100	78.835	ENSTSYG00000003097	POP1	100	78.835	Carlito_syrichta
ENSAMEG00000000556	POP1	99	75.097	ENSCAPG00000007251	POP1	99	75.097	Cavia_aperea
ENSAMEG00000000556	POP1	99	77.498	ENSCPOG00000002901	POP1	99	77.498	Cavia_porcellus
ENSAMEG00000000556	POP1	100	79.029	ENSCCAG00000018939	POP1	94	85.772	Cebus_capucinus
ENSAMEG00000000556	POP1	100	79.903	ENSCATG00000040916	POP1	100	79.903	Cercocebus_atys
ENSAMEG00000000556	POP1	100	79.515	ENSCLAG00000007208	POP1	97	79.515	Chinchilla_lanigera
ENSAMEG00000000556	POP1	90	80.324	ENSCSAG00000012340	POP1	99	80.324	Chlorocebus_sabaeus
ENSAMEG00000000556	POP1	87	86.287	ENSCHOG00000011432	POP1	96	86.287	Choloepus_hoffmanni
ENSAMEG00000000556	POP1	100	64.327	ENSCPBG00000006373	POP1	100	64.327	Chrysemys_picta_bellii
ENSAMEG00000000556	POP1	100	80.194	ENSCANG00000001647	POP1	100	80.194	Colobus_angolensis_palliatus
ENSAMEG00000000556	POP1	100	74.270	ENSCGRG00001017308	Pop1	100	74.270	Cricetulus_griseus_chok1gshd
ENSAMEG00000000556	POP1	100	68.803	ENSCGRG00000010824	Pop1	100	68.803	Cricetulus_griseus_crigri
ENSAMEG00000000556	POP1	100	45.802	ENSCSEG00000008737	POP1	100	45.853	Cynoglossus_semilaevis
ENSAMEG00000000556	POP1	100	47.048	ENSCVAG00000022248	pop1	100	47.283	Cyprinodon_variegatus
ENSAMEG00000000556	POP1	100	77.611	ENSDNOG00000019974	POP1	100	77.611	Dasypus_novemcinctus
ENSAMEG00000000556	POP1	100	67.925	ENSDORG00000015384	Pop1	100	67.925	Dipodomys_ordii
ENSAMEG00000000556	POP1	61	34.526	FBgn0026702	l(1)G0045	71	34.094	Drosophila_melanogaster
ENSAMEG00000000556	POP1	88	68.229	ENSETEG00000007839	POP1	88	68.229	Echinops_telfairi
ENSAMEG00000000556	POP1	100	82.796	ENSEASG00005003189	POP1	98	82.796	Equus_asinus_asinus
ENSAMEG00000000556	POP1	100	82.600	ENSECAG00000024236	POP1	100	82.600	Equus_caballus
ENSAMEG00000000556	POP1	66	86.111	ENSEEUG00000003050	-	70	86.111	Erinaceus_europaeus
ENSAMEG00000000556	POP1	99	47.519	ENSELUG00000003526	pop1	99	47.977	Esox_lucius
ENSAMEG00000000556	POP1	100	86.022	ENSFCAG00000002168	POP1	100	86.022	Felis_catus
ENSAMEG00000000556	POP1	100	59.231	ENSFALG00000005711	POP1	100	59.423	Ficedula_albicollis
ENSAMEG00000000556	POP1	100	77.767	ENSFDAG00000017068	POP1	100	77.767	Fukomys_damarensis
ENSAMEG00000000556	POP1	100	45.698	ENSFHEG00000019518	pop1	100	46.080	Fundulus_heteroclitus
ENSAMEG00000000556	POP1	94	45.190	ENSGMOG00000000659	POP1	99	45.090	Gadus_morhua
ENSAMEG00000000556	POP1	100	47.615	ENSGAFG00000019770	POP1	100	47.615	Gambusia_affinis
ENSAMEG00000000556	POP1	100	45.964	ENSGACG00000003499	pop1	100	45.905	Gasterosteus_aculeatus
ENSAMEG00000000556	POP1	100	63.010	ENSGAGG00000011737	POP1	98	63.204	Gopherus_agassizii
ENSAMEG00000000556	POP1	100	80.777	ENSGGOG00000003176	POP1	100	80.777	Gorilla_gorilla
ENSAMEG00000000556	POP1	100	47.810	ENSHBUG00000021583	pop1	100	47.810	Haplochromis_burtoni
ENSAMEG00000000556	POP1	100	77.476	ENSHGLG00000006029	POP1	100	77.476	Heterocephalus_glaber_female
ENSAMEG00000000556	POP1	100	77.476	ENSHGLG00100016879	POP1	100	77.476	Heterocephalus_glaber_male
ENSAMEG00000000556	POP1	90	48.723	ENSHCOG00000013888	pop1	96	48.723	Hippocampus_comes
ENSAMEG00000000556	POP1	100	45.330	ENSIPUG00000018336	pop1	93	52.427	Ictalurus_punctatus
ENSAMEG00000000556	POP1	100	77.573	ENSSTOG00000011455	POP1	97	77.573	Ictidomys_tridecemlineatus
ENSAMEG00000000556	POP1	100	72.842	ENSJJAG00000013325	Pop1	100	72.842	Jaculus_jaculus
ENSAMEG00000000556	POP1	100	47.019	ENSKMAG00000001346	POP1	100	47.404	Kryptolebias_marmoratus
ENSAMEG00000000556	POP1	89	47.532	ENSLBEG00000024457	POP1	95	47.152	Labrus_bergylta
ENSAMEG00000000556	POP1	93	55.556	ENSLACG00000012498	POP1	99	55.859	Latimeria_chalumnae
ENSAMEG00000000556	POP1	99	50.771	ENSLOCG00000009817	POP1	99	50.723	Lepisosteus_oculatus
ENSAMEG00000000556	POP1	100	80.377	ENSLAFG00000010770	POP1	100	80.377	Loxodonta_africana
ENSAMEG00000000556	POP1	100	80.194	ENSMFAG00000000347	POP1	100	80.194	Macaca_fascicularis
ENSAMEG00000000556	POP1	100	80.000	ENSMNEG00000036870	POP1	100	80.000	Macaca_nemestrina
ENSAMEG00000000556	POP1	100	80.097	ENSMLEG00000034986	POP1	100	80.097	Mandrillus_leucophaeus
ENSAMEG00000000556	POP1	100	47.048	ENSMAMG00000004040	pop1	100	47.288	Mastacembelus_armatus
ENSAMEG00000000556	POP1	100	47.714	ENSMZEG00005025448	pop1	100	47.714	Maylandia_zebra
ENSAMEG00000000556	POP1	100	59.718	ENSMGAG00000012167	POP1	100	59.925	Meleagris_gallopavo
ENSAMEG00000000556	POP1	100	73.823	ENSMAUG00000017537	Pop1	100	73.823	Mesocricetus_auratus
ENSAMEG00000000556	POP1	100	79.806	ENSMICG00000004361	POP1	100	80.097	Microcebus_murinus
ENSAMEG00000000556	POP1	100	72.144	ENSMOCG00000006356	Pop1	100	72.521	Microtus_ochrogaster
ENSAMEG00000000556	POP1	100	44.046	ENSMMOG00000018242	pop1	100	44.046	Mola_mola
ENSAMEG00000000556	POP1	99	66.923	ENSMODG00000006561	POP1	99	66.923	Monodelphis_domestica
ENSAMEG00000000556	POP1	100	46.964	ENSMALG00000012621	POP1	100	47.198	Monopterus_albus
ENSAMEG00000000556	POP1	100	71.604	MGP_CAROLIEiJ_G0019726	Pop1	100	71.604	Mus_caroli
ENSAMEG00000000556	POP1	100	72.075	ENSMUSG00000022325	Pop1	100	72.075	Mus_musculus
ENSAMEG00000000556	POP1	100	72.547	MGP_PahariEiJ_G0019735	Pop1	100	72.547	Mus_pahari
ENSAMEG00000000556	POP1	100	71.981	MGP_SPRETEiJ_G0020622	Pop1	100	71.981	Mus_spretus
ENSAMEG00000000556	POP1	100	90.166	ENSMPUG00000015250	POP1	100	90.166	Mustela_putorius_furo
ENSAMEG00000000556	POP1	100	77.366	ENSMLUG00000010204	POP1	100	77.366	Myotis_lucifugus
ENSAMEG00000000556	POP1	100	76.117	ENSNGAG00000001582	Pop1	100	76.117	Nannospalax_galili
ENSAMEG00000000556	POP1	89	48.870	ENSNBRG00000002356	pop1	94	49.043	Neolamprologus_brichardi
ENSAMEG00000000556	POP1	100	79.806	ENSNLEG00000002541	POP1	100	79.806	Nomascus_leucogenys
ENSAMEG00000000556	POP1	92	60.212	ENSMEUG00000003118	POP1	96	60.212	Notamacropus_eugenii
ENSAMEG00000000556	POP1	100	73.501	ENSOPRG00000007667	POP1	100	73.501	Ochotona_princeps
ENSAMEG00000000556	POP1	100	77.713	ENSODEG00000003984	POP1	100	77.713	Octodon_degus
ENSAMEG00000000556	POP1	100	48.000	ENSONIG00000016445	pop1	100	48.000	Oreochromis_niloticus
ENSAMEG00000000556	POP1	60	65.060	ENSOANG00000001278	-	94	65.060	Ornithorhynchus_anatinus
ENSAMEG00000000556	POP1	100	77.519	ENSOCUG00000017400	POP1	100	77.519	Oryctolagus_cuniculus
ENSAMEG00000000556	POP1	92	49.842	ENSORLG00000002839	pop1	100	47.587	Oryzias_latipes
ENSAMEG00000000556	POP1	90	49.308	ENSORLG00020022450	POP1	96	49.627	Oryzias_latipes_hni
ENSAMEG00000000556	POP1	92	49.631	ENSORLG00015012746	POP1	100	47.555	Oryzias_latipes_hsok
ENSAMEG00000000556	POP1	100	47.236	ENSOMEG00000006915	pop1	99	47.440	Oryzias_melastigma
ENSAMEG00000000556	POP1	100	77.961	ENSOGAG00000001466	POP1	100	77.961	Otolemur_garnettii
ENSAMEG00000000556	POP1	100	80.971	ENSPPAG00000018410	POP1	100	80.971	Pan_paniscus
ENSAMEG00000000556	POP1	100	85.742	ENSPPRG00000005002	POP1	100	85.742	Panthera_pardus
ENSAMEG00000000556	POP1	100	85.840	ENSPTIG00000016527	POP1	100	85.840	Panthera_tigris_altaica
ENSAMEG00000000556	POP1	100	80.874	ENSPTRG00000020458	POP1	100	80.874	Pan_troglodytes
ENSAMEG00000000556	POP1	100	80.097	ENSPANG00000009704	POP1	100	80.097	Papio_anubis
ENSAMEG00000000556	POP1	100	49.759	ENSPKIG00000016325	POP1	100	49.759	Paramormyrops_kingsleyae
ENSAMEG00000000556	POP1	100	62.429	ENSPSIG00000012343	POP1	100	62.429	Pelodiscus_sinensis
ENSAMEG00000000556	POP1	90	48.677	ENSPMGG00000022253	POP1	95	48.360	Periophthalmus_magnuspinnatus
ENSAMEG00000000556	POP1	99	73.390	ENSPEMG00000023633	Pop1	100	73.390	Peromyscus_maniculatus_bairdii
ENSAMEG00000000556	POP1	90	42.797	ENSPMAG00000003209	POP1	100	42.797	Petromyzon_marinus
ENSAMEG00000000556	POP1	99	65.451	ENSPCIG00000012216	POP1	99	65.255	Phascolarctos_cinereus
ENSAMEG00000000556	POP1	100	47.826	ENSPFOG00000012490	POP1	100	47.826	Poecilia_formosa
ENSAMEG00000000556	POP1	100	48.062	ENSPLAG00000004646	POP1	100	48.062	Poecilia_latipinna
ENSAMEG00000000556	POP1	100	48.216	ENSPMEG00000019592	POP1	100	48.216	Poecilia_mexicana
ENSAMEG00000000556	POP1	100	48.058	ENSPREG00000020951	POP1	100	47.961	Poecilia_reticulata
ENSAMEG00000000556	POP1	100	80.583	ENSPPYG00000018777	POP1	100	80.583	Pongo_abelii
ENSAMEG00000000556	POP1	100	75.170	ENSPCAG00000016662	POP1	100	74.394	Procavia_capensis
ENSAMEG00000000556	POP1	100	80.000	ENSPCOG00000019420	POP1	100	80.194	Propithecus_coquereli
ENSAMEG00000000556	POP1	100	81.250	ENSPVAG00000014468	POP1	100	81.250	Pteropus_vampyrus
ENSAMEG00000000556	POP1	89	48.810	ENSPNYG00000004476	pop1	97	48.287	Pundamilia_nyererei
ENSAMEG00000000556	POP1	100	46.020	ENSPNAG00000000265	pop1	100	43.927	Pygocentrus_nattereri
ENSAMEG00000000556	POP1	100	71.698	ENSRNOG00000005243	Pop1	100	71.698	Rattus_norvegicus
ENSAMEG00000000556	POP1	100	79.806	ENSRBIG00000007996	POP1	100	79.806	Rhinopithecus_bieti
ENSAMEG00000000556	POP1	100	80.000	ENSRROG00000012334	POP1	100	80.000	Rhinopithecus_roxellana
ENSAMEG00000000556	POP1	99	79.961	ENSSBOG00000020830	POP1	100	79.961	Saimiri_boliviensis_boliviensis
ENSAMEG00000000556	POP1	99	66.791	ENSSHAG00000000296	POP1	99	66.791	Sarcophilus_harrisii
ENSAMEG00000000556	POP1	100	47.328	ENSSFOG00015007429	pop1	99	47.328	Scleropages_formosus
ENSAMEG00000000556	POP1	92	46.910	ENSSMAG00000010467	POP1	97	48.694	Scophthalmus_maximus
ENSAMEG00000000556	POP1	100	46.724	ENSSDUG00000007817	POP1	100	46.629	Seriola_dumerili
ENSAMEG00000000556	POP1	100	46.774	ENSSLDG00000012565	POP1	100	46.774	Seriola_lalandi_dorsalis
ENSAMEG00000000556	POP1	100	57.920	ENSSPUG00000003550	-	100	57.920	Sphenodon_punctatus
ENSAMEG00000000556	POP1	90	50.108	ENSSPAG00000014955	pop1	94	50.432	Stegastes_partitus
ENSAMEG00000000556	POP1	100	79.472	ENSSSCG00000006078	POP1	100	79.472	Sus_scrofa
ENSAMEG00000000556	POP1	92	55.848	ENSTGUG00000012011	-	100	55.848	Taeniopygia_guttata
ENSAMEG00000000556	POP1	91	47.529	ENSTRUG00000010856	pop1	94	47.319	Takifugu_rubripes
ENSAMEG00000000556	POP1	93	47.423	ENSTNIG00000013297	pop1	99	47.423	Tetraodon_nigroviridis
ENSAMEG00000000556	POP1	95	75.026	ENSTBEG00000014214	POP1	99	75.026	Tupaia_belangeri
ENSAMEG00000000556	POP1	100	78.690	ENSTTRG00000016071	POP1	100	78.690	Tursiops_truncatus
ENSAMEG00000000556	POP1	99	91.502	ENSUAMG00000017309	POP1	100	91.502	Ursus_americanus
ENSAMEG00000000556	POP1	100	94.380	ENSUMAG00000016952	POP1	100	96.047	Ursus_maritimus
ENSAMEG00000000556	POP1	83	83.871	ENSVPAG00000008278	POP1	82	83.871	Vicugna_pacos
ENSAMEG00000000556	POP1	100	87.195	ENSVVUG00000010994	POP1	100	87.195	Vulpes_vulpes
ENSAMEG00000000556	POP1	100	43.378	ENSXCOG00000017043	POP1	100	43.378	Xiphophorus_couchianus
ENSAMEG00000000556	POP1	100	47.404	ENSXMAG00000002472	POP1	100	47.404	Xiphophorus_maculatus