EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000001127 (Gene tree)
Gene ID: 100464445
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 27606 bases
Position: chrGL193655.1:515831-543436
Accession: 100464445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000001194	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSAMEP00000001198	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000001246	RAB1A-202	615	-	ENSAMEP00000001198	205 (aa)	XP_002927708	G1L2T8
ENSAMET00000001242	RAB1A-201	615	-	ENSAMEP00000001194	204 (aa)	-	G1L2T4

Gene Model

Click here to download ENSAMEG00000001127's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000001127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000001127	RAB1A	85	35.632	ENSAMEG00000005041	-	97	36.527
ENSAMEG00000001127	RAB1A	62	35.878	ENSAMEG00000019231	ARL14	65	35.878
ENSAMEG00000001127	RAB1A	85	52.299	ENSAMEG00000003119	RAB11A	68	52.299
ENSAMEG00000001127	RAB1A	95	42.857	ENSAMEG00000003196	RAB5B	90	42.857
ENSAMEG00000001127	RAB1A	69	31.544	ENSAMEG00000019914	ARL4D	73	31.544
ENSAMEG00000001127	RAB1A	80	36.585	ENSAMEG00000010515	HRAS	64	36.585
ENSAMEG00000001127	RAB1A	76	40.252	ENSAMEG00000018882	RAB9A	79	40.252
ENSAMEG00000001127	RAB1A	81	35.928	ENSAMEG00000006368	MRAS	80	35.928
ENSAMEG00000001127	RAB1A	75	30.380	ENSAMEG00000002554	DNAJC27	58	30.380
ENSAMEG00000001127	RAB1A	99	93.069	ENSAMEG00000017135	RAB1B	100	93.069
ENSAMEG00000001127	RAB1A	94	43.367	ENSAMEG00000014916	RAB33A	82	43.367
ENSAMEG00000001127	RAB1A	58	33.600	ENSAMEG00000017738	-	62	33.600
ENSAMEG00000001127	RAB1A	57	31.933	ENSAMEG00000019250	ARL4A	59	31.933
ENSAMEG00000001127	RAB1A	77	39.024	ENSAMEG00000008955	RAB36	50	39.024
ENSAMEG00000001127	RAB1A	79	51.534	ENSAMEG00000007452	RAB12	71	51.534
ENSAMEG00000001127	RAB1A	81	38.922	ENSAMEG00000017134	NRAS	85	38.922
ENSAMEG00000001127	RAB1A	80	37.805	ENSAMEG00000007529	KRAS	86	37.805
ENSAMEG00000001127	RAB1A	95	43.814	ENSAMEG00000000954	RAB5A	90	43.814
ENSAMEG00000001127	RAB1A	90	48.649	ENSAMEG00000006285	RAB2B	86	48.649
ENSAMEG00000001127	RAB1A	77	40.994	ENSAMEG00000004697	RAB34	51	40.994
ENSAMEG00000001127	RAB1A	95	43.077	ENSAMEG00000006003	RAB5C	89	43.077
ENSAMEG00000001127	RAB1A	95	38.384	ENSAMEG00000017285	RAB6A	76	38.384
ENSAMEG00000001127	RAB1A	86	43.820	ENSAMEG00000009075	RAB39B	84	43.820
ENSAMEG00000001127	RAB1A	84	33.526	ENSAMEG00000006825	RAB23	73	33.526
ENSAMEG00000001127	RAB1A	75	37.107	ENSAMEG00000003173	-	68	37.107
ENSAMEG00000001127	RAB1A	81	46.386	ENSAMEG00000014249	RAB25	78	46.386
ENSAMEG00000001127	RAB1A	100	44.954	ENSAMEG00000004955	RAB11B	99	44.954
ENSAMEG00000001127	RAB1A	80	47.305	ENSAMEG00000003513	RAB15	78	47.305
ENSAMEG00000001127	RAB1A	78	39.264	ENSAMEG00000015249	RAB7A	79	39.264
ENSAMEG00000001127	RAB1A	95	36.410	ENSAMEG00000000252	RAB6B	94	36.410
ENSAMEG00000001127	RAB1A	76	39.623	ENSAMEG00000018531	RAB9B	79	39.623
ENSAMEG00000001127	RAB1A	57	34.746	ENSAMEG00000011970	ARL8A	60	34.746
ENSAMEG00000001127	RAB1A	83	43.429	ENSAMEG00000010983	RAB33B	72	43.429
ENSAMEG00000001127	RAB1A	81	50.602	ENSAMEG00000005231	RAB30	82	50.602
ENSAMEG00000001127	RAB1A	89	40.094	ENSAMEG00000015990	RAB18	94	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000001127	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSAMEG00000001127	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSAMEG00000001127	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSAMEG00000001127	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSAMEG00000001127	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSAMEG00000001127	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSAMEG00000001127	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSAMEG00000001127	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSAMEG00000001127	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSAMEG00000001127	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSAMEG00000001127	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSAMEG00000001127	RAB1A	99	99.507	ENSCHIG00000014060	RAB1A	99	99.507	Capra_hircus
ENSAMEG00000001127	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSAMEG00000001127	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSAMEG00000001127	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSAMEG00000001127	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSAMEG00000001127	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSAMEG00000001127	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSAMEG00000001127	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSAMEG00000001127	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSAMEG00000001127	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSAMEG00000001127	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSAMEG00000001127	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSAMEG00000001127	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSAMEG00000001127	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSAMEG00000001127	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSAMEG00000001127	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSAMEG00000001127	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSAMEG00000001127	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSAMEG00000001127	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSAMEG00000001127	RAB1A	99	99.505	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSAMEG00000001127	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSAMEG00000001127	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSAMEG00000001127	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSAMEG00000001127	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSAMEG00000001127	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSAMEG00000001127	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSAMEG00000001127	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSAMEG00000001127	RAB1A	97	100.000	ENSHGLG00100007994	RAB1A	97	100.000	Heterocephalus_glaber_male
ENSAMEG00000001127	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSAMEG00000001127	RAB1A	97	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSAMEG00000001127	RAB1A	97	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSAMEG00000001127	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSAMEG00000001127	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSAMEG00000001127	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSAMEG00000001127	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSAMEG00000001127	RAB1A	99	100.000	ENSMMUG00000021721	RAB1A	94	100.000	Macaca_mulatta
ENSAMEG00000001127	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSAMEG00000001127	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSAMEG00000001127	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSAMEG00000001127	RAB1A	99	99.010	ENSMGAG00000004611	RAB1A	100	99.010	Meleagris_gallopavo
ENSAMEG00000001127	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSAMEG00000001127	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSAMEG00000001127	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSAMEG00000001127	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSAMEG00000001127	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSAMEG00000001127	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSAMEG00000001127	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSAMEG00000001127	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSAMEG00000001127	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSAMEG00000001127	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSAMEG00000001127	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSAMEG00000001127	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSAMEG00000001127	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSAMEG00000001127	RAB1A	97	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSAMEG00000001127	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSAMEG00000001127	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSAMEG00000001127	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSAMEG00000001127	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSAMEG00000001127	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSAMEG00000001127	RAB1A	99	99.507	ENSOARG00000019997	RAB1A	100	99.507	Ovis_aries
ENSAMEG00000001127	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSAMEG00000001127	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSAMEG00000001127	RAB1A	99	99.507	ENSPTIG00000013471	RAB1A	99	99.507	Panthera_tigris_altaica
ENSAMEG00000001127	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSAMEG00000001127	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSAMEG00000001127	RAB1A	97	99.495	ENSPSIG00000008028	RAB1A	97	99.495	Pelodiscus_sinensis
ENSAMEG00000001127	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSAMEG00000001127	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSAMEG00000001127	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSAMEG00000001127	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSAMEG00000001127	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSAMEG00000001127	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSAMEG00000001127	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSAMEG00000001127	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSAMEG00000001127	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSAMEG00000001127	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSAMEG00000001127	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSAMEG00000001127	RAB1A	98	99.497	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSAMEG00000001127	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSAMEG00000001127	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSAMEG00000001127	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSAMEG00000001127	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSAMEG00000001127	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSAMEG00000001127	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSAMEG00000001127	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSAMEG00000001127	RAB1A	98	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSAMEG00000001127	RAB1A	97	100.000	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSAMEG00000001127	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSAMEG00000001127	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus