EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000001697 (Gene tree)
Gene ID: 100483595
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 31121 bases
Position: chrGL192647.1:709849-740969
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000001822	KH_1	PF00013.29	9.5e-56	1	3
ENSAMEP00000001822	KH_1	PF00013.29	9.5e-56	2	3
ENSAMEP00000001822	KH_1	PF00013.29	9.5e-56	3	3
ENSAMEP00000001828	KH_1	PF00013.29	1.2e-55	1	3
ENSAMEP00000001828	KH_1	PF00013.29	1.2e-55	2	3
ENSAMEP00000001828	KH_1	PF00013.29	1.2e-55	3	3
ENSAMEP00000001828	KH_2	PF07650.17	1.2e-15	1	1
ENSAMEP00000001822	KH_2	PF07650.17	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000001903	-	1101	-	ENSAMEP00000001828	367 (aa)	-	G1L4L8
ENSAMET00000001897	-	1059	-	ENSAMEP00000001822	352 (aa)	-	G1L4L2

Gene Model

Click here to download ENSAMEG00000001697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000001697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000001697	-	70	52.857	ENSAMEG00000003926	HNRNPK	57	52.857
ENSAMEG00000001697	-	95	33.333	ENSAMEG00000005087	IGF2BP1	62	33.582
ENSAMEG00000001697	-	67	35.938	ENSAMEG00000006978	KHSRP	56	35.938
ENSAMEG00000001697	-	95	57.485	ENSAMEG00000009211	PCBP4	73	60.502
ENSAMEG00000001697	-	98	36.296	ENSAMEG00000016763	IGF2BP2	61	36.567
ENSAMEG00000001697	-	99	71.978	ENSAMEG00000012520	PCBP2	97	71.978
ENSAMEG00000001697	-	75	31.405	ENSAMEG00000016193	FUBP3	68	31.405
ENSAMEG00000001697	-	67	40.845	ENSAMEG00000000649	NOVA2	86	40.845
ENSAMEG00000001697	-	99	66.213	ENSAMEG00000016094	PCBP1	99	67.989
ENSAMEG00000001697	-	86	42.254	ENSAMEG00000015330	NOVA1	52	42.254
ENSAMEG00000001697	-	90	33.813	ENSAMEG00000003485	IGF2BP3	59	33.813
ENSAMEG00000001697	-	59	40.625	ENSAMEG00000007372	FUBP1	50	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000001697	-	99	85.345	ENSAPOG00000016582	-	98	88.166	Acanthochromis_polyacanthus
ENSAMEG00000001697	-	98	82.421	ENSAPOG00000020003	pcbp3	87	86.446	Acanthochromis_polyacanthus
ENSAMEG00000001697	-	96	84.320	ENSACIG00000010933	pcbp3	93	84.320	Amphilophus_citrinellus
ENSAMEG00000001697	-	99	85.057	ENSACIG00000002739	-	98	87.353	Amphilophus_citrinellus
ENSAMEG00000001697	-	89	91.667	ENSAOCG00000007806	-	100	91.667	Amphiprion_ocellaris
ENSAMEG00000001697	-	95	86.350	ENSAOCG00000008592	-	96	90.683	Amphiprion_ocellaris
ENSAMEG00000001697	-	99	85.920	ENSAPEG00000005209	-	98	90.090	Amphiprion_percula
ENSAMEG00000001697	-	96	87.021	ENSAPEG00000008011	pcbp3	93	87.021	Amphiprion_percula
ENSAMEG00000001697	-	95	84.866	ENSATEG00000015787	-	98	84.866	Anabas_testudineus
ENSAMEG00000001697	-	99	85.345	ENSATEG00000009833	-	98	89.489	Anabas_testudineus
ENSAMEG00000001697	-	97	78.202	ENSAPLG00000008951	-	80	78.202	Anas_platyrhynchos
ENSAMEG00000001697	-	100	86.066	ENSAPLG00000002975	-	100	93.787	Anas_platyrhynchos
ENSAMEG00000001697	-	99	83.761	ENSACAG00000009819	-	99	83.761	Anolis_carolinensis
ENSAMEG00000001697	-	100	85.753	ENSACAG00000004607	-	100	88.674	Anolis_carolinensis
ENSAMEG00000001697	-	96	87.132	ENSANAG00000030702	-	100	92.607	Aotus_nancymaae
ENSAMEG00000001697	-	96	86.726	ENSACLG00000011835	pcbp3	93	86.726	Astatotilapia_calliptera
ENSAMEG00000001697	-	99	87.069	ENSACLG00000003801	-	98	91.291	Astatotilapia_calliptera
ENSAMEG00000001697	-	95	82.738	ENSAMXG00000013588	-	98	86.335	Astyanax_mexicanus
ENSAMEG00000001697	-	97	63.912	ENSAMXG00000001760	zgc:110045	73	64.306	Astyanax_mexicanus
ENSAMEG00000001697	-	96	88.462	ENSAMXG00000003440	pcbp3	93	88.462	Astyanax_mexicanus
ENSAMEG00000001697	-	91	98.162	ENSCAFG00020019472	-	97	98.162	Canis_lupus_dingo
ENSAMEG00000001697	-	100	91.826	ENSCSAG00000007440	-	99	91.826	Chlorocebus_sabaeus
ENSAMEG00000001697	-	92	94.100	ENSCPBG00000012151	-	100	94.100	Chrysemys_picta_bellii
ENSAMEG00000001697	-	97	92.268	ENSCPBG00000000733	-	69	91.327	Chrysemys_picta_bellii
ENSAMEG00000001697	-	99	74.510	ENSCSEG00000016984	-	98	76.068	Cynoglossus_semilaevis
ENSAMEG00000001697	-	95	82.789	ENSCSEG00000000822	pcbp3	97	86.957	Cynoglossus_semilaevis
ENSAMEG00000001697	-	96	87.278	ENSCVAG00000014482	pcbp3	93	87.278	Cyprinodon_variegatus
ENSAMEG00000001697	-	99	87.216	ENSCVAG00000005262	-	99	91.395	Cyprinodon_variegatus
ENSAMEG00000001697	-	99	88.920	ENSDARG00000054378	pcbp3	99	88.920	Danio_rerio
ENSAMEG00000001697	-	100	77.620	ENSETEG00000015988	-	100	81.361	Echinops_telfairi
ENSAMEG00000001697	-	73	65.759	ENSEBUG00000005495	pcbp3	74	71.545	Eptatretus_burgeri
ENSAMEG00000001697	-	98	74.286	ENSEBUG00000007485	-	92	82.805	Eptatretus_burgeri
ENSAMEG00000001697	-	96	66.667	ENSEBUG00000016192	pcbp3	99	70.035	Eptatretus_burgeri
ENSAMEG00000001697	-	95	87.834	ENSELUG00000003521	pcbp3	93	87.834	Esox_lucius
ENSAMEG00000001697	-	95	87.240	ENSELUG00000001560	-	97	83.662	Esox_lucius
ENSAMEG00000001697	-	100	88.920	ENSFALG00000003949	-	100	92.604	Ficedula_albicollis
ENSAMEG00000001697	-	97	78.474	ENSFALG00000004411	-	75	78.474	Ficedula_albicollis
ENSAMEG00000001697	-	96	84.071	ENSFHEG00000016615	pcbp3	94	87.692	Fundulus_heteroclitus
ENSAMEG00000001697	-	99	85.227	ENSFHEG00000006539	-	99	89.318	Fundulus_heteroclitus
ENSAMEG00000001697	-	88	71.779	ENSGMOG00000008611	-	98	71.779	Gadus_morhua
ENSAMEG00000001697	-	88	81.155	ENSGMOG00000011992	pcbp3	95	80.303	Gadus_morhua
ENSAMEG00000001697	-	99	83.429	ENSGALG00000013155	-	99	81.924	Gallus_gallus
ENSAMEG00000001697	-	100	83.558	ENSGALG00000004394	-	99	91.892	Gallus_gallus
ENSAMEG00000001697	-	96	86.982	ENSGAFG00000010274	-	93	91.331	Gambusia_affinis
ENSAMEG00000001697	-	97	82.456	ENSGAFG00000011430	pcbp3	95	82.456	Gambusia_affinis
ENSAMEG00000001697	-	91	91.343	ENSGACG00000002266	-	98	91.343	Gasterosteus_aculeatus
ENSAMEG00000001697	-	99	77.236	ENSGACG00000014955	-	98	80.392	Gasterosteus_aculeatus
ENSAMEG00000001697	-	92	82.031	ENSGAGG00000000271	-	100	84.615	Gopherus_agassizii
ENSAMEG00000001697	-	73	88.384	ENSGAGG00000006956	-	80	88.384	Gopherus_agassizii
ENSAMEG00000001697	-	99	87.069	ENSHBUG00000021782	-	98	91.291	Haplochromis_burtoni
ENSAMEG00000001697	-	96	86.982	ENSHBUG00000010697	pcbp3	96	87.578	Haplochromis_burtoni
ENSAMEG00000001697	-	96	87.537	ENSHCOG00000017868	pcbp3	93	87.537	Hippocampus_comes
ENSAMEG00000001697	-	99	83.573	ENSHCOG00000006067	-	98	87.387	Hippocampus_comes
ENSAMEG00000001697	-	99	88.920	ENSIPUG00000006238	pcbp3	99	89.614	Ictalurus_punctatus
ENSAMEG00000001697	-	96	87.021	ENSKMAG00000003046	pcbp3	93	87.021	Kryptolebias_marmoratus
ENSAMEG00000001697	-	96	86.391	ENSKMAG00000018530	-	93	90.712	Kryptolebias_marmoratus
ENSAMEG00000001697	-	98	82.899	ENSLBEG00000006201	pcbp3	96	86.970	Labrus_bergylta
ENSAMEG00000001697	-	99	74.352	ENSLBEG00000006542	-	98	76.036	Labrus_bergylta
ENSAMEG00000001697	-	97	78.297	ENSLACG00000010804	zgc:110045	74	78.297	Latimeria_chalumnae
ENSAMEG00000001697	-	97	83.060	ENSLACG00000010386	pcbp3	75	83.060	Latimeria_chalumnae
ENSAMEG00000001697	-	100	89.235	ENSLOCG00000009369	pcbp3	100	92.082	Lepisosteus_oculatus
ENSAMEG00000001697	-	97	83.871	ENSLOCG00000005058	zgc:110045	81	83.871	Lepisosteus_oculatus
ENSAMEG00000001697	-	95	84.226	ENSMAMG00000022336	pcbp3	92	87.385	Mastacembelus_armatus
ENSAMEG00000001697	-	99	84.770	ENSMAMG00000011620	-	98	88.889	Mastacembelus_armatus
ENSAMEG00000001697	-	96	81.899	ENSMZEG00005014882	-	98	84.012	Maylandia_zebra
ENSAMEG00000001697	-	96	84.320	ENSMZEG00005008993	pcbp3	96	84.821	Maylandia_zebra
ENSAMEG00000001697	-	97	78.747	ENSMGAG00000006794	-	75	78.747	Meleagris_gallopavo
ENSAMEG00000001697	-	97	81.793	ENSMGAG00000001883	-	97	81.793	Meleagris_gallopavo
ENSAMEG00000001697	-	99	84.483	ENSMMOG00000005216	-	98	88.589	Mola_mola
ENSAMEG00000001697	-	95	83.432	ENSMMOG00000000730	pcbp3	86	87.037	Mola_mola
ENSAMEG00000001697	-	74	76.786	ENSMODG00000027884	-	93	81.308	Monodelphis_domestica
ENSAMEG00000001697	-	95	85.119	ENSMALG00000000691	pcbp3	93	85.119	Monopterus_albus
ENSAMEG00000001697	-	100	88.315	ENSMPUG00000001779	-	99	88.315	Mustela_putorius_furo
ENSAMEG00000001697	-	95	84.118	ENSNBRG00000016714	-	100	83.046	Neolamprologus_brichardi
ENSAMEG00000001697	-	96	84.570	ENSNBRG00000016409	-	93	84.570	Neolamprologus_brichardi
ENSAMEG00000001697	-	97	83.565	ENSOPRG00000003431	-	100	85.429	Ochotona_princeps
ENSAMEG00000001697	-	95	82.817	ENSONIG00000012122	-	96	84.438	Oreochromis_niloticus
ENSAMEG00000001697	-	99	87.069	ENSONIG00000004611	-	98	91.291	Oreochromis_niloticus
ENSAMEG00000001697	-	100	91.553	ENSOCUG00000002696	-	99	91.553	Oryctolagus_cuniculus
ENSAMEG00000001697	-	99	87.356	ENSORLG00000022739	-	98	91.592	Oryzias_latipes
ENSAMEG00000001697	-	95	86.350	ENSORLG00000000059	pcbp3	98	90.683	Oryzias_latipes
ENSAMEG00000001697	-	99	87.069	ENSORLG00020006124	-	98	91.291	Oryzias_latipes_hni
ENSAMEG00000001697	-	95	86.350	ENSORLG00020012671	pcbp3	95	90.683	Oryzias_latipes_hni
ENSAMEG00000001697	-	98	86.087	ENSORLG00015008051	-	95	90.303	Oryzias_latipes_hsok
ENSAMEG00000001697	-	95	86.350	ENSORLG00015000429	pcbp3	95	90.683	Oryzias_latipes_hsok
ENSAMEG00000001697	-	96	83.025	ENSOMEG00000020811	pcbp3	99	87.379	Oryzias_melastigma
ENSAMEG00000001697	-	99	87.069	ENSOMEG00000020162	-	98	91.291	Oryzias_melastigma
ENSAMEG00000001697	-	100	85.791	ENSOGAG00000008044	-	100	88.798	Otolemur_garnettii
ENSAMEG00000001697	-	99	85.920	ENSPKIG00000019329	pcbp3	98	90.090	Paramormyrops_kingsleyae
ENSAMEG00000001697	-	72	83.505	ENSPKIG00000020913	-	84	83.590	Paramormyrops_kingsleyae
ENSAMEG00000001697	-	92	82.031	ENSPSIG00000008350	-	68	82.031	Pelodiscus_sinensis
ENSAMEG00000001697	-	100	77.236	ENSPSIG00000014970	-	100	85.337	Pelodiscus_sinensis
ENSAMEG00000001697	-	95	86.905	ENSPMGG00000022383	pcbp3	93	86.905	Periophthalmus_magnuspinnatus
ENSAMEG00000001697	-	98	67.335	ENSPMAG00000004551	pcbp3	91	70.871	Petromyzon_marinus
ENSAMEG00000001697	-	72	89.119	ENSPMAG00000004637	-	100	89.119	Petromyzon_marinus
ENSAMEG00000001697	-	100	90.368	ENSPCIG00000028092	-	99	93.722	Phascolarctos_cinereus
ENSAMEG00000001697	-	91	91.291	ENSPLAG00000004074	-	91	91.291	Poecilia_latipinna
ENSAMEG00000001697	-	97	78.611	ENSPLAG00000011449	pcbp3	87	81.534	Poecilia_latipinna
ENSAMEG00000001697	-	95	86.726	ENSPMEG00000021239	pcbp3	93	86.726	Poecilia_mexicana
ENSAMEG00000001697	-	100	82.466	ENSPMEG00000006653	-	100	87.464	Poecilia_mexicana
ENSAMEG00000001697	-	99	85.345	ENSPREG00000020585	-	91	98.020	Poecilia_reticulata
ENSAMEG00000001697	-	95	82.006	ENSPREG00000015736	pcbp3	97	86.111	Poecilia_reticulata
ENSAMEG00000001697	-	99	84.770	ENSPNYG00000013205	-	98	88.889	Pundamilia_nyererei
ENSAMEG00000001697	-	95	83.680	ENSPNYG00000012326	pcbp3	93	87.888	Pundamilia_nyererei
ENSAMEG00000001697	-	96	86.647	ENSPNAG00000008541	-	96	86.875	Pygocentrus_nattereri
ENSAMEG00000001697	-	99	87.500	ENSPNAG00000015104	pcbp3	99	91.691	Pygocentrus_nattereri
ENSAMEG00000001697	-	100	90.085	ENSRNOG00000001245	Pcbp3	100	94.379	Rattus_norvegicus
ENSAMEG00000001697	-	100	82.058	ENSRBIG00000028177	-	100	82.058	Rhinopithecus_bieti
ENSAMEG00000001697	-	100	86.523	ENSSHAG00000007890	-	100	94.395	Sarcophilus_harrisii
ENSAMEG00000001697	-	96	87.834	ENSSFOG00015010205	pcbp3	98	87.202	Scleropages_formosus
ENSAMEG00000001697	-	99	75.783	ENSSFOG00015007118	-	97	78.932	Scleropages_formosus
ENSAMEG00000001697	-	96	87.834	ENSSFOG00015014706	pcbp3	93	87.834	Scleropages_formosus
ENSAMEG00000001697	-	95	83.976	ENSSMAG00000011929	pcbp3	95	88.199	Scophthalmus_maximus
ENSAMEG00000001697	-	99	87.069	ENSSMAG00000003135	-	98	91.291	Scophthalmus_maximus
ENSAMEG00000001697	-	96	82.493	ENSSDUG00000008502	-	98	81.424	Seriola_dumerili
ENSAMEG00000001697	-	95	85.163	ENSSDUG00000011608	pcbp3	97	85.163	Seriola_dumerili
ENSAMEG00000001697	-	96	87.278	ENSSLDG00000020161	-	93	91.641	Seriola_lalandi_dorsalis
ENSAMEG00000001697	-	95	85.163	ENSSLDG00000008518	pcbp3	97	85.163	Seriola_lalandi_dorsalis
ENSAMEG00000001697	-	93	82.392	ENSSPUG00000013214	-	90	86.935	Sphenodon_punctatus
ENSAMEG00000001697	-	89	92.000	ENSSPAG00000004190	-	100	92.000	Stegastes_partitus
ENSAMEG00000001697	-	96	73.669	ENSSPAG00000023341	-	93	73.669	Stegastes_partitus
ENSAMEG00000001697	-	99	82.102	ENSTGUG00000008158	-	100	85.757	Taeniopygia_guttata
ENSAMEG00000001697	-	92	90.560	ENSTGUG00000003316	-	100	90.560	Taeniopygia_guttata
ENSAMEG00000001697	-	96	86.335	ENSTRUG00000006280	-	92	90.879	Takifugu_rubripes
ENSAMEG00000001697	-	96	85.207	ENSTRUG00000013604	pcbp3	82	97.872	Takifugu_rubripes
ENSAMEG00000001697	-	100	86.253	ENSTTRG00000015075	-	100	87.845	Tursiops_truncatus
ENSAMEG00000001697	-	92	90.909	ENSXETG00000011483	pcbp1	100	90.909	Xenopus_tropicalis
ENSAMEG00000001697	-	93	77.586	ENSXETG00000010491	pcbp2	74	77.586	Xenopus_tropicalis
ENSAMEG00000001697	-	95	86.726	ENSXCOG00000020481	pcbp3	93	86.726	Xiphophorus_couchianus
ENSAMEG00000001697	-	99	84.900	ENSXMAG00000028711	-	93	91.641	Xiphophorus_maculatus
ENSAMEG00000001697	-	96	87.021	ENSXMAG00000008175	pcbp3	93	87.021	Xiphophorus_maculatus