EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000001752 (Gene tree)
Gene ID: 100468272
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type and G-patch domain containing
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 10981 bases
Position: chrGL193319.1:322803-333783
Accession: 100468272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000001839	zf-CCCH	PF00642.24	0.00018	1	1
ENSAMEP00000001832	zf-CCCH	PF00642.24	0.00019	1	1
ENSAMEP00000001839	G-patch	PF01585.23	5.8e-12	1	1
ENSAMEP00000001832	G-patch	PF01585.23	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000001914	-	1539	-	ENSAMEP00000001839	512 (aa)	XP_002925738	G1L4M9
ENSAMET00000001907	-	1596	-	ENSAMEP00000001832	531 (aa)	-	G1L4M2

Gene Model

Click here to download ENSAMEG00000001752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000001752's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000001752	-	100	78.530	ENSG00000197114	ZGPAT	100	79.497	Homo_sapiens
ENSAMEG00000001752	-	100	50.000	ENSAPOG00000001732	zgpat	100	49.534	Acanthochromis_polyacanthus
ENSAMEG00000001752	-	100	50.188	ENSACIG00000015939	zgpat	100	49.719	Amphilophus_citrinellus
ENSAMEG00000001752	-	100	50.936	ENSAOCG00000014437	zgpat	100	50.749	Amphiprion_ocellaris
ENSAMEG00000001752	-	100	51.311	ENSAPEG00000006555	zgpat	100	51.124	Amphiprion_percula
ENSAMEG00000001752	-	100	50.000	ENSATEG00000003346	zgpat	100	48.257	Anabas_testudineus
ENSAMEG00000001752	-	100	65.465	ENSAPLG00000014707	-	100	65.275	Anas_platyrhynchos
ENSAMEG00000001752	-	91	61.818	ENSACAG00000012278	-	100	59.960	Anolis_carolinensis
ENSAMEG00000001752	-	100	78.835	ENSANAG00000035708	ZGPAT	100	79.806	Aotus_nancymaae
ENSAMEG00000001752	-	100	50.649	ENSACLG00000013778	zgpat	100	48.995	Astatotilapia_calliptera
ENSAMEG00000001752	-	100	48.609	ENSAMXG00000018583	zgpat	100	47.610	Astyanax_mexicanus
ENSAMEG00000001752	-	100	83.301	ENSBTAG00000007498	ZGPAT	100	83.689	Bos_taurus
ENSAMEG00000001752	-	100	75.472	ENSCJAG00000010398	ZGPAT	100	78.227	Callithrix_jacchus
ENSAMEG00000001752	-	99	85.437	ENSCAFG00000013056	ZGPAT	99	85.243	Canis_familiaris
ENSAMEG00000001752	-	100	86.047	ENSCAFG00020001956	-	100	85.078	Canis_lupus_dingo
ENSAMEG00000001752	-	100	83.689	ENSCHIG00000026209	-	100	84.078	Capra_hircus
ENSAMEG00000001752	-	96	77.800	ENSTSYG00000000795	ZGPAT	97	79.000	Carlito_syrichta
ENSAMEG00000001752	-	55	83.333	ENSCAPG00000009466	-	100	83.333	Cavia_aperea
ENSAMEG00000001752	-	100	76.505	ENSCPOG00000014427	ZGPAT	100	77.087	Cavia_porcellus
ENSAMEG00000001752	-	100	78.252	ENSCCAG00000035441	ZGPAT	100	78.835	Cebus_capucinus
ENSAMEG00000001752	-	100	77.907	ENSCATG00000034076	ZGPAT	100	79.651	Cercocebus_atys
ENSAMEG00000001752	-	100	80.777	ENSCLAG00000004087	ZGPAT	100	80.583	Chinchilla_lanigera
ENSAMEG00000001752	-	100	76.164	ENSCSAG00000016628	ZGPAT	100	77.467	Chlorocebus_sabaeus
ENSAMEG00000001752	-	66	66.667	ENSCHOG00000013646	-	84	65.957	Choloepus_hoffmanni
ENSAMEG00000001752	-	100	62.268	ENSCPBG00000014736	-	99	62.268	Chrysemys_picta_bellii
ENSAMEG00000001752	-	100	78.295	ENSCANG00000041082	ZGPAT	100	79.457	Colobus_angolensis_palliatus
ENSAMEG00000001752	-	100	78.252	ENSCGRG00001011442	Zgpat	100	78.058	Cricetulus_griseus_chok1gshd
ENSAMEG00000001752	-	100	70.291	ENSCGRG00000014321	Zgpat	100	70.097	Cricetulus_griseus_crigri
ENSAMEG00000001752	-	100	50.095	ENSCSEG00000002301	zgpat	100	48.507	Cynoglossus_semilaevis
ENSAMEG00000001752	-	100	50.752	ENSCVAG00000007255	zgpat	100	50.940	Cyprinodon_variegatus
ENSAMEG00000001752	-	100	48.507	ENSDARG00000027403	zgpat	100	49.245	Danio_rerio
ENSAMEG00000001752	-	100	78.682	ENSDNOG00000025874	-	100	78.488	Dasypus_novemcinctus
ENSAMEG00000001752	-	96	77.642	ENSDORG00000001360	Zgpat	100	78.455	Dipodomys_ordii
ENSAMEG00000001752	-	93	39.474	ENSEBUG00000009006	ZGPAT	99	38.722	Eptatretus_burgeri
ENSAMEG00000001752	-	100	72.814	ENSEASG00005023159	-	100	73.574	Equus_asinus_asinus
ENSAMEG00000001752	-	100	75.340	ENSECAG00000019674	-	100	76.117	Equus_caballus
ENSAMEG00000001752	-	100	49.449	ENSELUG00000003733	zgpat	100	48.803	Esox_lucius
ENSAMEG00000001752	-	100	90.234	ENSFCAG00000001173	-	100	90.039	Felis_catus
ENSAMEG00000001752	-	100	64.220	ENSFALG00000005924	-	100	64.037	Ficedula_albicollis
ENSAMEG00000001752	-	100	78.252	ENSFDAG00000002974	ZGPAT	100	78.058	Fukomys_damarensis
ENSAMEG00000001752	-	100	52.897	ENSFHEG00000009966	zgpat	100	52.710	Fundulus_heteroclitus
ENSAMEG00000001752	-	100	63.720	ENSGALG00000006092	-	100	63.352	Gallus_gallus
ENSAMEG00000001752	-	100	49.341	ENSGAFG00000020149	zgpat	100	49.906	Gambusia_affinis
ENSAMEG00000001752	-	100	50.380	ENSGACG00000004662	zgpat	100	50.096	Gasterosteus_aculeatus
ENSAMEG00000001752	-	100	61.852	ENSGAGG00000019510	-	99	61.852	Gopherus_agassizii
ENSAMEG00000001752	-	100	76.394	ENSGGOG00000004801	ZGPAT	100	77.323	Gorilla_gorilla
ENSAMEG00000001752	-	100	51.206	ENSHBUG00000010362	zgpat	100	50.649	Haplochromis_burtoni
ENSAMEG00000001752	-	100	75.522	ENSHGLG00000014870	ZGPAT	100	75.901	Heterocephalus_glaber_female
ENSAMEG00000001752	-	100	77.713	ENSHGLG00100003927	ZGPAT	100	78.101	Heterocephalus_glaber_male
ENSAMEG00000001752	-	100	50.667	ENSHCOG00000004674	zgpat	100	48.785	Hippocampus_comes
ENSAMEG00000001752	-	100	49.254	ENSIPUG00000012890	zgpat	100	48.524	Ictalurus_punctatus
ENSAMEG00000001752	-	95	73.931	ENSSTOG00000011986	ZGPAT	100	75.356	Ictidomys_tridecemlineatus
ENSAMEG00000001752	-	100	71.289	ENSJJAG00000008007	-	100	71.094	Jaculus_jaculus
ENSAMEG00000001752	-	100	77.734	ENSJJAG00000018714	-	100	77.539	Jaculus_jaculus
ENSAMEG00000001752	-	100	49.812	ENSKMAG00000006523	zgpat	100	51.024	Kryptolebias_marmoratus
ENSAMEG00000001752	-	100	50.854	ENSLBEG00000016259	zgpat	100	51.440	Labrus_bergylta
ENSAMEG00000001752	-	100	55.249	ENSLACG00000002661	zgpat	100	55.617	Latimeria_chalumnae
ENSAMEG00000001752	-	100	57.197	ENSLOCG00000001659	zgpat	100	57.331	Lepisosteus_oculatus
ENSAMEG00000001752	-	100	77.713	ENSMFAG00000001467	ZGPAT	100	79.264	Macaca_fascicularis
ENSAMEG00000001752	-	100	77.713	ENSMMUG00000000171	ZGPAT	100	79.070	Macaca_mulatta
ENSAMEG00000001752	-	100	78.101	ENSMNEG00000019568	ZGPAT	100	78.876	Macaca_nemestrina
ENSAMEG00000001752	-	100	77.713	ENSMLEG00000035416	ZGPAT	100	79.070	Mandrillus_leucophaeus
ENSAMEG00000001752	-	100	50.189	ENSMAMG00000008266	zgpat	100	50.095	Mastacembelus_armatus
ENSAMEG00000001752	-	100	50.187	ENSMZEG00005021620	zgpat	100	48.897	Maylandia_zebra
ENSAMEG00000001752	-	100	60.777	ENSMGAG00000006823	-	100	61.441	Meleagris_gallopavo
ENSAMEG00000001752	-	100	78.058	ENSMAUG00000017248	Zgpat	100	77.864	Mesocricetus_auratus
ENSAMEG00000001752	-	100	82.913	ENSMICG00000033269	ZGPAT	100	83.107	Microcebus_murinus
ENSAMEG00000001752	-	100	78.835	ENSMOCG00000001324	Zgpat	100	78.641	Microtus_ochrogaster
ENSAMEG00000001752	-	100	51.823	ENSMMOG00000014951	zgpat	100	52.015	Mola_mola
ENSAMEG00000001752	-	92	68.399	ENSMODG00000017016	-	88	67.983	Monodelphis_domestica
ENSAMEG00000001752	-	100	48.092	ENSMALG00000006584	zgpat	100	47.529	Monopterus_albus
ENSAMEG00000001752	-	100	78.058	MGP_CAROLIEiJ_G0024806	Zgpat	100	78.058	Mus_caroli
ENSAMEG00000001752	-	100	77.282	ENSMUSG00000027582	Zgpat	100	77.670	Mus_musculus
ENSAMEG00000001752	-	100	78.058	MGP_PahariEiJ_G0026254	Zgpat	100	78.058	Mus_pahari
ENSAMEG00000001752	-	100	77.670	MGP_SPRETEiJ_G0025732	Zgpat	100	77.476	Mus_spretus
ENSAMEG00000001752	-	100	80.183	ENSMLUG00000005264	-	100	80.183	Myotis_lucifugus
ENSAMEG00000001752	-	100	49.251	ENSNBRG00000021521	zgpat	100	48.708	Neolamprologus_brichardi
ENSAMEG00000001752	-	100	75.881	ENSNLEG00000010146	ZGPAT	100	76.766	Nomascus_leucogenys
ENSAMEG00000001752	-	86	59.778	ENSMEUG00000011946	-	100	59.424	Notamacropus_eugenii
ENSAMEG00000001752	-	62	70.154	ENSOPRG00000002115	-	100	70.769	Ochotona_princeps
ENSAMEG00000001752	-	100	78.641	ENSODEG00000006562	ZGPAT	100	78.252	Octodon_degus
ENSAMEG00000001752	-	100	51.020	ENSONIG00000009365	zgpat	100	49.360	Oreochromis_niloticus
ENSAMEG00000001752	-	100	68.939	ENSOANG00000004932	-	100	68.750	Ornithorhynchus_anatinus
ENSAMEG00000001752	-	63	74.631	ENSOCUG00000008687	-	100	75.516	Oryctolagus_cuniculus
ENSAMEG00000001752	-	100	52.552	ENSORLG00000000880	zgpat	100	51.589	Oryzias_latipes
ENSAMEG00000001752	-	100	53.383	ENSORLG00020004339	zgpat	100	53.545	Oryzias_latipes_hni
ENSAMEG00000001752	-	100	52.552	ENSORLG00015018532	zgpat	100	53.545	Oryzias_latipes_hsok
ENSAMEG00000001752	-	100	51.601	ENSOMEG00000014655	zgpat	100	50.373	Oryzias_melastigma
ENSAMEG00000001752	-	100	80.539	ENSOGAG00000034509	ZGPAT	100	80.539	Otolemur_garnettii
ENSAMEG00000001752	-	100	77.536	ENSOARG00000010128	ZGPAT	100	77.106	Ovis_aries
ENSAMEG00000001752	-	100	77.220	ENSPPAG00000027831	ZGPAT	100	77.563	Pan_paniscus
ENSAMEG00000001752	-	100	90.039	ENSPPRG00000024151	-	100	89.844	Panthera_pardus
ENSAMEG00000001752	-	100	90.039	ENSPTIG00000020325	-	100	89.844	Panthera_tigris_altaica
ENSAMEG00000001752	-	100	77.413	ENSPTRG00000013750	ZGPAT	100	77.756	Pan_troglodytes
ENSAMEG00000001752	-	100	75.419	ENSPANG00000005904	ZGPAT	100	76.723	Papio_anubis
ENSAMEG00000001752	-	100	50.738	ENSPKIG00000012056	zgpat	100	50.923	Paramormyrops_kingsleyae
ENSAMEG00000001752	-	100	63.197	ENSPSIG00000015801	-	100	63.197	Pelodiscus_sinensis
ENSAMEG00000001752	-	100	50.654	ENSPMGG00000014856	zgpat	100	50.467	Periophthalmus_magnuspinnatus
ENSAMEG00000001752	-	100	78.641	ENSPEMG00000015676	Zgpat	100	78.447	Peromyscus_maniculatus_bairdii
ENSAMEG00000001752	-	100	70.038	ENSPCIG00000017922	-	100	69.656	Phascolarctos_cinereus
ENSAMEG00000001752	-	100	51.718	ENSPFOG00000010326	zgpat	100	52.542	Poecilia_formosa
ENSAMEG00000001752	-	100	52.662	ENSPLAG00000002135	zgpat	100	52.731	Poecilia_latipinna
ENSAMEG00000001752	-	100	51.521	ENSPMEG00000019064	zgpat	100	52.345	Poecilia_mexicana
ENSAMEG00000001752	-	100	51.036	ENSPREG00000010919	zgpat	100	51.412	Poecilia_reticulata
ENSAMEG00000001752	-	100	77.950	ENSPPYG00000011246	ZGPAT	100	78.917	Pongo_abelii
ENSAMEG00000001752	-	69	70.959	ENSPCAG00000001883	-	99	70.879	Procavia_capensis
ENSAMEG00000001752	-	100	82.239	ENSPCOG00000012369	ZGPAT	100	83.012	Propithecus_coquereli
ENSAMEG00000001752	-	100	75.875	ENSPVAG00000013489	-	100	75.875	Pteropus_vampyrus
ENSAMEG00000001752	-	100	50.558	ENSPNYG00000013216	zgpat	100	49.628	Pundamilia_nyererei
ENSAMEG00000001752	-	100	48.030	ENSPNAG00000012769	zgpat	100	47.467	Pygocentrus_nattereri
ENSAMEG00000001752	-	100	76.505	ENSRNOG00000014235	Zgpat	100	76.699	Rattus_norvegicus
ENSAMEG00000001752	-	100	77.864	ENSRBIG00000034134	ZGPAT	100	79.029	Rhinopithecus_bieti
ENSAMEG00000001752	-	100	77.713	ENSRROG00000039084	ZGPAT	100	79.070	Rhinopithecus_roxellana
ENSAMEG00000001752	-	100	79.223	ENSSBOG00000028752	ZGPAT	100	79.417	Saimiri_boliviensis_boliviensis
ENSAMEG00000001752	-	100	69.466	ENSSHAG00000017828	-	100	69.084	Sarcophilus_harrisii
ENSAMEG00000001752	-	100	50.000	ENSSFOG00015000739	zgpat	100	49.631	Scleropages_formosus
ENSAMEG00000001752	-	100	48.694	ENSSMAG00000006646	zgpat	100	48.066	Scophthalmus_maximus
ENSAMEG00000001752	-	100	48.417	ENSSDUG00000014684	zgpat	100	49.632	Seriola_dumerili
ENSAMEG00000001752	-	100	50.093	ENSSLDG00000019446	zgpat	100	49.816	Seriola_lalandi_dorsalis
ENSAMEG00000001752	-	100	63.670	ENSSPUG00000018516	-	100	64.168	Sphenodon_punctatus
ENSAMEG00000001752	-	100	51.685	ENSSPAG00000022473	zgpat	100	51.577	Stegastes_partitus
ENSAMEG00000001752	-	100	84.272	ENSSSCG00000036595	-	100	85.243	Sus_scrofa
ENSAMEG00000001752	-	100	67.048	ENSTGUG00000007115	-	100	66.667	Taeniopygia_guttata
ENSAMEG00000001752	-	100	51.020	ENSTRUG00000010488	zgpat	100	49.817	Takifugu_rubripes
ENSAMEG00000001752	-	100	50.847	ENSTNIG00000004165	zgpat	100	49.907	Tetraodon_nigroviridis
ENSAMEG00000001752	-	71	87.466	ENSTTRG00000012223	-	71	87.466	Tursiops_truncatus
ENSAMEG00000001752	-	100	98.438	ENSUAMG00000009298	-	100	98.438	Ursus_americanus
ENSAMEG00000001752	-	100	98.242	ENSUMAG00000022033	-	100	98.242	Ursus_maritimus
ENSAMEG00000001752	-	100	83.203	ENSVVUG00000015014	-	100	83.203	Vulpes_vulpes
ENSAMEG00000001752	-	100	51.412	ENSXMAG00000004759	zgpat	100	51.789	Xiphophorus_maculatus