EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000001916 (Gene tree)
Gene ID: 100466024
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 45274 bases
Position: chrGL193319.1:524833-570106
Accession: 100466024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000002064	PRP1_N	PF06424.12	3.4e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000002147	PRPF6-201	2853	XM_002925684	ENSAMEP00000002064	950 (aa)	XP_002925730	G1L5A3

Gene Model

Click here to download ENSAMEG00000001916's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000001916's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000001916	PRPF6	99	96.391	ENSG00000101161	PRPF6	100	96.391	Homo_sapiens
ENSAMEG00000001916	PRPF6	99	91.614	ENSAPOG00000010395	prpf6	96	92.038	Acanthochromis_polyacanthus
ENSAMEG00000001916	PRPF6	99	91.614	ENSACIG00000019862	prpf6	96	92.038	Amphilophus_citrinellus
ENSAMEG00000001916	PRPF6	99	91.614	ENSAOCG00000012988	prpf6	96	92.038	Amphiprion_ocellaris
ENSAMEG00000001916	PRPF6	99	85.032	ENSAPEG00000008301	prpf6	100	85.456	Amphiprion_percula
ENSAMEG00000001916	PRPF6	99	91.295	ENSATEG00000005581	prpf6	96	91.720	Anabas_testudineus
ENSAMEG00000001916	PRPF6	99	96.617	ENSACAG00000006464	PRPF6	96	96.617	Anolis_carolinensis
ENSAMEG00000001916	PRPF6	99	96.497	ENSANAG00000012661	PRPF6	100	97.176	Aotus_nancymaae
ENSAMEG00000001916	PRPF6	99	91.295	ENSACLG00000025875	prpf6	96	91.720	Astatotilapia_calliptera
ENSAMEG00000001916	PRPF6	99	91.341	ENSAMXG00000001929	prpf6	96	91.763	Astyanax_mexicanus
ENSAMEG00000001916	PRPF6	99	98.089	ENSBTAG00000011656	PRPF6	100	98.089	Bos_taurus
ENSAMEG00000001916	PRPF6	99	96.497	ENSCJAG00000010616	PRPF6	100	96.497	Callithrix_jacchus
ENSAMEG00000001916	PRPF6	99	98.514	ENSCAFG00000013165	PRPF6	100	98.514	Canis_familiaris
ENSAMEG00000001916	PRPF6	99	98.514	ENSCAFG00020002050	PRPF6	100	98.514	Canis_lupus_dingo
ENSAMEG00000001916	PRPF6	99	98.089	ENSCHIG00000018187	PRPF6	100	98.089	Capra_hircus
ENSAMEG00000001916	PRPF6	99	97.240	ENSTSYG00000007814	PRPF6	100	97.240	Carlito_syrichta
ENSAMEG00000001916	PRPF6	97	97.383	ENSCAPG00000015077	PRPF6	100	97.383	Cavia_aperea
ENSAMEG00000001916	PRPF6	99	97.558	ENSCPOG00000007518	PRPF6	100	97.558	Cavia_porcellus
ENSAMEG00000001916	PRPF6	99	93.206	ENSCCAG00000024564	PRPF6	100	93.312	Cebus_capucinus
ENSAMEG00000001916	PRPF6	99	96.497	ENSCATG00000037473	PRPF6	100	96.497	Cercocebus_atys
ENSAMEG00000001916	PRPF6	99	93.631	ENSCLAG00000003854	PRPF6	100	93.631	Chinchilla_lanigera
ENSAMEG00000001916	PRPF6	99	91.245	ENSCSAG00000016742	PRPF6	100	91.245	Chlorocebus_sabaeus
ENSAMEG00000001916	PRPF6	84	81.626	ENSCHOG00000003315	-	100	81.626	Choloepus_hoffmanni
ENSAMEG00000001916	PRPF6	99	96.934	ENSCPBG00000013964	PRPF6	97	96.934	Chrysemys_picta_bellii
ENSAMEG00000001916	PRPF6	99	72.670	ENSCING00000008817	-	99	72.670	Ciona_intestinalis
ENSAMEG00000001916	PRPF6	99	96.285	ENSCANG00000038230	PRPF6	100	96.285	Colobus_angolensis_palliatus
ENSAMEG00000001916	PRPF6	99	97.558	ENSCGRG00001022666	Prpf6	100	97.558	Cricetulus_griseus_chok1gshd
ENSAMEG00000001916	PRPF6	99	85.881	ENSCSEG00000018561	prpf6	100	86.306	Cynoglossus_semilaevis
ENSAMEG00000001916	PRPF6	99	91.614	ENSCVAG00000010550	prpf6	96	92.038	Cyprinodon_variegatus
ENSAMEG00000001916	PRPF6	99	91.121	ENSDARG00000091367	prpf6	99	91.543	Danio_rerio
ENSAMEG00000001916	PRPF6	99	96.815	ENSDNOG00000040544	PRPF6	100	96.815	Dasypus_novemcinctus
ENSAMEG00000001916	PRPF6	90	97.780	ENSDORG00000005406	Prpf6	100	97.780	Dipodomys_ordii
ENSAMEG00000001916	PRPF6	98	71.078	FBgn0036828	CG6841	99	71.383	Drosophila_melanogaster
ENSAMEG00000001916	PRPF6	85	95.614	ENSETEG00000004447	PRPF6	85	95.614	Echinops_telfairi
ENSAMEG00000001916	PRPF6	99	85.503	ENSEBUG00000008835	prpf6	100	85.503	Eptatretus_burgeri
ENSAMEG00000001916	PRPF6	99	98.089	ENSEASG00005023115	PRPF6	100	98.089	Equus_asinus_asinus
ENSAMEG00000001916	PRPF6	99	93.843	ENSECAG00000013983	PRPF6	100	93.843	Equus_caballus
ENSAMEG00000001916	PRPF6	86	96.767	ENSEEUG00000000180	PRPF6	79	96.767	Erinaceus_europaeus
ENSAMEG00000001916	PRPF6	99	90.234	ENSELUG00000001945	prpf6	93	90.234	Esox_lucius
ENSAMEG00000001916	PRPF6	99	98.514	ENSFCAG00000001183	PRPF6	100	98.514	Felis_catus
ENSAMEG00000001916	PRPF6	99	89.112	ENSFALG00000006046	-	97	89.112	Ficedula_albicollis
ENSAMEG00000001916	PRPF6	99	96.519	ENSFALG00000010326	-	98	96.519	Ficedula_albicollis
ENSAMEG00000001916	PRPF6	99	97.346	ENSFDAG00000006451	PRPF6	100	98.639	Fukomys_damarensis
ENSAMEG00000001916	PRPF6	99	92.251	ENSFHEG00000000560	prpf6	96	92.251	Fundulus_heteroclitus
ENSAMEG00000001916	PRPF6	99	88.068	ENSGMOG00000015622	prpf6	99	88.068	Gadus_morhua
ENSAMEG00000001916	PRPF6	99	96.709	ENSGALG00000006001	PRPF6	100	96.709	Gallus_gallus
ENSAMEG00000001916	PRPF6	99	86.943	ENSGAFG00000021109	prpf6	96	87.367	Gambusia_affinis
ENSAMEG00000001916	PRPF6	99	90.127	ENSGACG00000002576	prpf6	99	90.127	Gasterosteus_aculeatus
ENSAMEG00000001916	PRPF6	99	96.829	ENSGAGG00000008653	PRPF6	97	96.829	Gopherus_agassizii
ENSAMEG00000001916	PRPF6	99	96.391	ENSGGOG00000016876	PRPF6	100	96.391	Gorilla_gorilla
ENSAMEG00000001916	PRPF6	99	91.295	ENSHBUG00000004496	prpf6	96	91.720	Haplochromis_burtoni
ENSAMEG00000001916	PRPF6	99	97.558	ENSHGLG00000009222	PRPF6	100	97.558	Heterocephalus_glaber_female
ENSAMEG00000001916	PRPF6	97	98.691	ENSHGLG00100016600	PRPF6	100	98.691	Heterocephalus_glaber_male
ENSAMEG00000001916	PRPF6	99	90.127	ENSHCOG00000011513	prpf6	96	90.552	Hippocampus_comes
ENSAMEG00000001916	PRPF6	99	92.357	ENSIPUG00000004912	prpf6	96	92.357	Ictalurus_punctatus
ENSAMEG00000001916	PRPF6	99	94.804	ENSSTOG00000002922	PRPF6	100	94.804	Ictidomys_tridecemlineatus
ENSAMEG00000001916	PRPF6	99	97.665	ENSJJAG00000000836	Prpf6	100	97.665	Jaculus_jaculus
ENSAMEG00000001916	PRPF6	99	91.401	ENSKMAG00000017800	prpf6	96	91.826	Kryptolebias_marmoratus
ENSAMEG00000001916	PRPF6	99	90.870	ENSLBEG00000012582	prpf6	96	90.870	Labrus_bergylta
ENSAMEG00000001916	PRPF6	99	93.446	ENSLOCG00000004827	prpf6	95	93.869	Lepisosteus_oculatus
ENSAMEG00000001916	PRPF6	99	96.603	ENSLAFG00000005272	PRPF6	100	96.603	Loxodonta_africana
ENSAMEG00000001916	PRPF6	99	96.285	ENSMFAG00000037542	PRPF6	100	96.285	Macaca_fascicularis
ENSAMEG00000001916	PRPF6	90	99.307	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSAMEG00000001916	PRPF6	99	82.011	ENSMNEG00000045555	PRPF6	100	82.011	Macaca_nemestrina
ENSAMEG00000001916	PRPF6	99	91.401	ENSMAMG00000010718	prpf6	96	91.826	Mastacembelus_armatus
ENSAMEG00000001916	PRPF6	99	90.986	ENSMZEG00005015261	-	99	91.410	Maylandia_zebra
ENSAMEG00000001916	PRPF6	91	92.610	ENSMZEG00005026539	prpf6	98	92.610	Maylandia_zebra
ENSAMEG00000001916	PRPF6	97	98.037	ENSMGAG00000006634	PRPF6	100	98.037	Meleagris_gallopavo
ENSAMEG00000001916	PRPF6	99	97.452	ENSMAUG00000013969	Prpf6	100	97.452	Mesocricetus_auratus
ENSAMEG00000001916	PRPF6	87	97.932	ENSMICG00000017793	PRPF6	99	97.932	Microcebus_murinus
ENSAMEG00000001916	PRPF6	99	97.346	ENSMOCG00000001701	Prpf6	100	97.346	Microtus_ochrogaster
ENSAMEG00000001916	PRPF6	99	90.658	ENSMMOG00000020419	prpf6	100	91.083	Mola_mola
ENSAMEG00000001916	PRPF6	98	97.906	ENSMODG00000017051	PRPF6	99	97.906	Monodelphis_domestica
ENSAMEG00000001916	PRPF6	98	91.918	ENSMALG00000000089	prpf6	99	91.918	Monopterus_albus
ENSAMEG00000001916	PRPF6	99	90.870	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSAMEG00000001916	PRPF6	99	97.452	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSAMEG00000001916	PRPF6	99	97.452	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSAMEG00000001916	PRPF6	99	97.452	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSAMEG00000001916	PRPF6	90	98.927	ENSMPUG00000008673	PRPF6	99	98.927	Mustela_putorius_furo
ENSAMEG00000001916	PRPF6	99	97.665	ENSNGAG00000003365	Prpf6	100	97.665	Nannospalax_galili
ENSAMEG00000001916	PRPF6	99	91.401	ENSNBRG00000015025	prpf6	96	91.826	Neolamprologus_brichardi
ENSAMEG00000001916	PRPF6	99	96.285	ENSNLEG00000010208	PRPF6	100	96.285	Nomascus_leucogenys
ENSAMEG00000001916	PRPF6	99	88.933	ENSMEUG00000009824	-	90	88.933	Notamacropus_eugenii
ENSAMEG00000001916	PRPF6	99	91.507	ENSODEG00000004841	PRPF6	100	91.507	Octodon_degus
ENSAMEG00000001916	PRPF6	99	91.295	ENSONIG00000017406	prpf6	96	91.720	Oreochromis_niloticus
ENSAMEG00000001916	PRPF6	99	97.346	ENSOANG00000004920	PRPF6	100	97.346	Ornithorhynchus_anatinus
ENSAMEG00000001916	PRPF6	98	96.352	ENSOCUG00000014151	PRPF6	100	96.352	Oryctolagus_cuniculus
ENSAMEG00000001916	PRPF6	99	91.083	ENSORLG00000009592	prpf6	96	91.083	Oryzias_latipes
ENSAMEG00000001916	PRPF6	99	91.189	ENSORLG00020001458	prpf6	96	91.189	Oryzias_latipes_hni
ENSAMEG00000001916	PRPF6	99	91.189	ENSORLG00015018762	prpf6	96	91.189	Oryzias_latipes_hsok
ENSAMEG00000001916	PRPF6	99	90.870	ENSOMEG00000012174	prpf6	96	91.295	Oryzias_melastigma
ENSAMEG00000001916	PRPF6	99	89.714	ENSOGAG00000007573	PRPF6	100	89.714	Otolemur_garnettii
ENSAMEG00000001916	PRPF6	99	97.886	ENSOARG00000008776	PRPF6	99	97.886	Ovis_aries
ENSAMEG00000001916	PRPF6	99	96.391	ENSPPAG00000008686	PRPF6	100	96.391	Pan_paniscus
ENSAMEG00000001916	PRPF6	99	98.408	ENSPPRG00000008497	PRPF6	100	98.408	Panthera_pardus
ENSAMEG00000001916	PRPF6	97	99.564	ENSPTIG00000011184	PRPF6	97	99.564	Panthera_tigris_altaica
ENSAMEG00000001916	PRPF6	99	96.391	ENSPTRG00000013765	PRPF6	100	96.391	Pan_troglodytes
ENSAMEG00000001916	PRPF6	99	96.178	ENSPANG00000024135	PRPF6	100	96.178	Papio_anubis
ENSAMEG00000001916	PRPF6	99	92.600	ENSPKIG00000005627	prpf6	99	93.023	Paramormyrops_kingsleyae
ENSAMEG00000001916	PRPF6	93	98.299	ENSPSIG00000007717	PRPF6	100	98.299	Pelodiscus_sinensis
ENSAMEG00000001916	PRPF6	99	89.183	ENSPMGG00000008925	prpf6	96	89.396	Periophthalmus_magnuspinnatus
ENSAMEG00000001916	PRPF6	99	97.346	ENSPEMG00000016036	Prpf6	100	97.346	Peromyscus_maniculatus_bairdii
ENSAMEG00000001916	PRPF6	99	86.814	ENSPMAG00000006144	prpf6	99	86.814	Petromyzon_marinus
ENSAMEG00000001916	PRPF6	99	97.452	ENSPCIG00000017909	PRPF6	100	97.452	Phascolarctos_cinereus
ENSAMEG00000001916	PRPF6	99	91.826	ENSPFOG00000006431	prpf6	96	92.251	Poecilia_formosa
ENSAMEG00000001916	PRPF6	99	91.720	ENSPLAG00000005974	prpf6	96	92.144	Poecilia_latipinna
ENSAMEG00000001916	PRPF6	99	91.932	ENSPMEG00000009977	prpf6	96	92.357	Poecilia_mexicana
ENSAMEG00000001916	PRPF6	99	91.826	ENSPREG00000017993	prpf6	92	92.251	Poecilia_reticulata
ENSAMEG00000001916	PRPF6	99	95.860	ENSPPYG00000011256	PRPF6	100	95.860	Pongo_abelii
ENSAMEG00000001916	PRPF6	94	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSAMEG00000001916	PRPF6	99	96.709	ENSPCOG00000016881	PRPF6	100	96.709	Propithecus_coquereli
ENSAMEG00000001916	PRPF6	99	91.614	ENSPVAG00000014316	PRPF6	100	91.614	Pteropus_vampyrus
ENSAMEG00000001916	PRPF6	99	74.973	ENSPNYG00000001939	prpf6	70	89.888	Pundamilia_nyererei
ENSAMEG00000001916	PRPF6	99	91.860	ENSPNAG00000015606	prpf6	96	92.283	Pygocentrus_nattereri
ENSAMEG00000001916	PRPF6	99	97.346	ENSRNOG00000051498	Prpf6	100	97.346	Rattus_norvegicus
ENSAMEG00000001916	PRPF6	99	96.285	ENSRBIG00000043613	PRPF6	100	96.285	Rhinopithecus_bieti
ENSAMEG00000001916	PRPF6	99	93.129	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSAMEG00000001916	PRPF6	90	93.426	ENSSBOG00000020632	PRPF6	93	93.426	Saimiri_boliviensis_boliviensis
ENSAMEG00000001916	PRPF6	99	97.452	ENSSHAG00000016810	PRPF6	100	97.452	Sarcophilus_harrisii
ENSAMEG00000001916	PRPF6	98	93.642	ENSSFOG00015020859	prpf6	99	94.073	Scleropages_formosus
ENSAMEG00000001916	PRPF6	99	90.658	ENSSMAG00000008112	prpf6	96	90.658	Scophthalmus_maximus
ENSAMEG00000001916	PRPF6	99	91.295	ENSSDUG00000016142	prpf6	96	91.720	Seriola_dumerili
ENSAMEG00000001916	PRPF6	99	91.295	ENSSLDG00000025283	prpf6	100	88.217	Seriola_lalandi_dorsalis
ENSAMEG00000001916	PRPF6	93	96.599	ENSSPUG00000018260	PRPF6	100	96.599	Sphenodon_punctatus
ENSAMEG00000001916	PRPF6	99	91.295	ENSSPAG00000015850	prpf6	96	91.720	Stegastes_partitus
ENSAMEG00000001916	PRPF6	99	97.780	ENSSSCG00000029119	PRPF6	100	99.093	Sus_scrofa
ENSAMEG00000001916	PRPF6	99	96.825	ENSTGUG00000007221	PRPF6	100	96.825	Taeniopygia_guttata
ENSAMEG00000001916	PRPF6	99	90.446	ENSTRUG00000002920	prpf6	96	90.870	Takifugu_rubripes
ENSAMEG00000001916	PRPF6	99	84.161	ENSTNIG00000017873	prpf6	100	84.583	Tetraodon_nigroviridis
ENSAMEG00000001916	PRPF6	88	98.343	ENSTBEG00000005348	PRPF6	85	98.343	Tupaia_belangeri
ENSAMEG00000001916	PRPF6	99	97.452	ENSTTRG00000013068	PRPF6	100	97.452	Tursiops_truncatus
ENSAMEG00000001916	PRPF6	98	97.735	ENSUMAG00000021631	PRPF6	99	97.735	Ursus_maritimus
ENSAMEG00000001916	PRPF6	99	98.514	ENSVVUG00000014948	PRPF6	100	98.514	Vulpes_vulpes
ENSAMEG00000001916	PRPF6	99	94.186	ENSXETG00000012054	prpf6	97	94.609	Xenopus_tropicalis
ENSAMEG00000001916	PRPF6	99	91.932	ENSXCOG00000008082	prpf6	96	92.357	Xiphophorus_couchianus
ENSAMEG00000001916	PRPF6	99	91.932	ENSXMAG00000015581	prpf6	96	92.357	Xiphophorus_maculatus