EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000002187 (Gene tree)
Gene ID: 100482356
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 43350 bases
Position: chrGL192795.1:148382-191731
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000002325	CPSF_A	PF03178.15	2e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000002422	SF3B3-201	3663	-	ENSAMEP00000002325	1220 (aa)	-	G1L613

Gene Model

Click here to download ENSAMEG00000002187's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000002187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000002187	SF3B3	100	99.672	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSAMEG00000002187	SF3B3	96	93.356	ENSAPOG00000006172	sf3b3	98	93.356	Acanthochromis_polyacanthus
ENSAMEG00000002187	SF3B3	92	90.714	ENSACIG00000016487	sf3b3	100	90.714	Amphilophus_citrinellus
ENSAMEG00000002187	SF3B3	100	93.279	ENSAOCG00000007158	sf3b3	100	93.279	Amphiprion_ocellaris
ENSAMEG00000002187	SF3B3	100	93.279	ENSAPEG00000022786	sf3b3	100	93.279	Amphiprion_percula
ENSAMEG00000002187	SF3B3	100	93.361	ENSATEG00000013708	sf3b3	100	93.361	Anabas_testudineus
ENSAMEG00000002187	SF3B3	81	97.778	ENSAPLG00000004996	SF3B3	100	97.778	Anas_platyrhynchos
ENSAMEG00000002187	SF3B3	100	98.443	ENSACAG00000001817	SF3B3	100	98.443	Anolis_carolinensis
ENSAMEG00000002187	SF3B3	100	99.672	ENSANAG00000028001	SF3B3	100	99.672	Aotus_nancymaae
ENSAMEG00000002187	SF3B3	96	93.015	ENSACLG00000022555	sf3b3	98	93.015	Astatotilapia_calliptera
ENSAMEG00000002187	SF3B3	100	93.033	ENSAMXG00000003410	sf3b3	100	93.033	Astyanax_mexicanus
ENSAMEG00000002187	SF3B3	100	99.672	ENSBTAG00000010627	SF3B3	100	99.672	Bos_taurus
ENSAMEG00000002187	SF3B3	100	60.439	WBGene00019323	teg-4	100	60.439	Caenorhabditis_elegans
ENSAMEG00000002187	SF3B3	100	99.672	ENSCJAG00000014773	SF3B3	99	99.672	Callithrix_jacchus
ENSAMEG00000002187	SF3B3	100	99.754	ENSCAFG00000020151	SF3B3	100	99.754	Canis_familiaris
ENSAMEG00000002187	SF3B3	100	99.754	ENSCAFG00020020912	SF3B3	100	99.754	Canis_lupus_dingo
ENSAMEG00000002187	SF3B3	100	99.754	ENSCHIG00000019822	SF3B3	100	99.754	Capra_hircus
ENSAMEG00000002187	SF3B3	100	99.672	ENSTSYG00000007910	SF3B3	100	99.672	Carlito_syrichta
ENSAMEG00000002187	SF3B3	84	89.016	ENSCAPG00000001484	SF3B3	92	89.016	Cavia_aperea
ENSAMEG00000002187	SF3B3	100	98.361	ENSCPOG00000000586	SF3B3	100	98.361	Cavia_porcellus
ENSAMEG00000002187	SF3B3	100	99.672	ENSCCAG00000017736	SF3B3	100	99.672	Cebus_capucinus
ENSAMEG00000002187	SF3B3	100	99.672	ENSCATG00000036562	SF3B3	100	99.672	Cercocebus_atys
ENSAMEG00000002187	SF3B3	100	99.672	ENSCLAG00000003921	SF3B3	100	99.672	Chinchilla_lanigera
ENSAMEG00000002187	SF3B3	100	99.590	ENSCSAG00000004371	SF3B3	100	99.590	Chlorocebus_sabaeus
ENSAMEG00000002187	SF3B3	90	91.975	ENSCHOG00000001878	SF3B3	90	91.975	Choloepus_hoffmanni
ENSAMEG00000002187	SF3B3	100	98.689	ENSCPBG00000015853	SF3B3	100	98.689	Chrysemys_picta_bellii
ENSAMEG00000002187	SF3B3	100	80.672	ENSCING00000001342	-	100	80.672	Ciona_intestinalis
ENSAMEG00000002187	SF3B3	99	79.197	ENSCSAVG00000011454	-	100	79.197	Ciona_savignyi
ENSAMEG00000002187	SF3B3	100	96.393	ENSCANG00000042920	SF3B3	100	96.393	Colobus_angolensis_palliatus
ENSAMEG00000002187	SF3B3	100	99.590	ENSCGRG00001015908	Sf3b3	100	99.590	Cricetulus_griseus_chok1gshd
ENSAMEG00000002187	SF3B3	100	99.590	ENSCGRG00000010180	Sf3b3	100	99.590	Cricetulus_griseus_crigri
ENSAMEG00000002187	SF3B3	82	92.338	ENSCSEG00000014192	sf3b3	99	92.338	Cynoglossus_semilaevis
ENSAMEG00000002187	SF3B3	100	92.459	ENSCVAG00000010459	sf3b3	100	92.459	Cyprinodon_variegatus
ENSAMEG00000002187	SF3B3	100	93.279	ENSDARG00000103553	sf3b3	100	93.279	Danio_rerio
ENSAMEG00000002187	SF3B3	85	99.904	ENSDNOG00000043626	SF3B3	100	99.904	Dasypus_novemcinctus
ENSAMEG00000002187	SF3B3	100	99.672	ENSDORG00000014176	Sf3b3	100	99.672	Dipodomys_ordii
ENSAMEG00000002187	SF3B3	100	75.041	FBgn0035162	Sf3b3	100	75.041	Drosophila_melanogaster
ENSAMEG00000002187	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSAMEG00000002187	SF3B3	100	87.623	ENSEBUG00000006117	sf3b3	100	87.623	Eptatretus_burgeri
ENSAMEG00000002187	SF3B3	100	99.754	ENSEASG00005013376	SF3B3	100	99.754	Equus_asinus_asinus
ENSAMEG00000002187	SF3B3	100	99.754	ENSECAG00000014053	SF3B3	100	99.754	Equus_caballus
ENSAMEG00000002187	SF3B3	93	99.821	ENSEEUG00000015611	SF3B3	93	99.821	Erinaceus_europaeus
ENSAMEG00000002187	SF3B3	100	91.251	ENSELUG00000015417	sf3b3	100	91.251	Esox_lucius
ENSAMEG00000002187	SF3B3	100	99.754	ENSFCAG00000009487	SF3B3	100	99.754	Felis_catus
ENSAMEG00000002187	SF3B3	100	98.770	ENSFALG00000007372	SF3B3	100	98.770	Ficedula_albicollis
ENSAMEG00000002187	SF3B3	100	99.590	ENSFDAG00000002608	SF3B3	100	99.590	Fukomys_damarensis
ENSAMEG00000002187	SF3B3	100	92.869	ENSFHEG00000017824	sf3b3	100	92.869	Fundulus_heteroclitus
ENSAMEG00000002187	SF3B3	100	89.271	ENSGMOG00000008139	sf3b3	100	89.271	Gadus_morhua
ENSAMEG00000002187	SF3B3	100	98.852	ENSGALG00000002531	SF3B3	100	98.852	Gallus_gallus
ENSAMEG00000002187	SF3B3	100	92.459	ENSGAFG00000015206	sf3b3	100	92.459	Gambusia_affinis
ENSAMEG00000002187	SF3B3	100	92.875	ENSGACG00000002646	sf3b3	100	92.875	Gasterosteus_aculeatus
ENSAMEG00000002187	SF3B3	96	98.722	ENSGAGG00000006746	SF3B3	97	98.722	Gopherus_agassizii
ENSAMEG00000002187	SF3B3	100	99.672	ENSGGOG00000003246	SF3B3	100	99.672	Gorilla_gorilla
ENSAMEG00000002187	SF3B3	92	85.804	ENSHBUG00000005960	sf3b3	100	86.964	Haplochromis_burtoni
ENSAMEG00000002187	SF3B3	100	99.672	ENSHGLG00000010135	SF3B3	100	99.672	Heterocephalus_glaber_female
ENSAMEG00000002187	SF3B3	100	97.492	ENSHGLG00100011148	SF3B3	100	97.492	Heterocephalus_glaber_male
ENSAMEG00000002187	SF3B3	100	92.541	ENSHCOG00000011981	sf3b3	100	92.541	Hippocampus_comes
ENSAMEG00000002187	SF3B3	100	92.951	ENSIPUG00000020435	sf3b3	100	92.951	Ictalurus_punctatus
ENSAMEG00000002187	SF3B3	100	99.672	ENSSTOG00000007065	SF3B3	100	99.672	Ictidomys_tridecemlineatus
ENSAMEG00000002187	SF3B3	100	99.672	ENSJJAG00000003948	Sf3b3	100	99.672	Jaculus_jaculus
ENSAMEG00000002187	SF3B3	100	90.656	ENSKMAG00000004066	sf3b3	99	92.845	Kryptolebias_marmoratus
ENSAMEG00000002187	SF3B3	100	92.787	ENSLBEG00000018302	sf3b3	100	92.787	Labrus_bergylta
ENSAMEG00000002187	SF3B3	98	92.429	ENSLACG00000012501	SF3B3	99	92.429	Latimeria_chalumnae
ENSAMEG00000002187	SF3B3	100	93.939	ENSLOCG00000007566	sf3b3	100	93.939	Lepisosteus_oculatus
ENSAMEG00000002187	SF3B3	100	99.754	ENSLAFG00000012219	SF3B3	100	99.769	Loxodonta_africana
ENSAMEG00000002187	SF3B3	100	99.672	ENSMFAG00000045487	SF3B3	100	99.672	Macaca_fascicularis
ENSAMEG00000002187	SF3B3	100	99.672	ENSMMUG00000017812	SF3B3	100	99.672	Macaca_mulatta
ENSAMEG00000002187	SF3B3	100	99.672	ENSMNEG00000033385	SF3B3	100	99.672	Macaca_nemestrina
ENSAMEG00000002187	SF3B3	100	96.148	ENSMLEG00000043891	SF3B3	97	99.682	Mandrillus_leucophaeus
ENSAMEG00000002187	SF3B3	100	93.361	ENSMAMG00000016837	sf3b3	100	93.361	Mastacembelus_armatus
ENSAMEG00000002187	SF3B3	100	92.951	ENSMZEG00005010836	sf3b3	100	92.951	Maylandia_zebra
ENSAMEG00000002187	SF3B3	89	90.287	ENSMZEG00005026015	sf3b3	99	90.287	Maylandia_zebra
ENSAMEG00000002187	SF3B3	100	98.852	ENSMGAG00000001597	SF3B3	100	98.852	Meleagris_gallopavo
ENSAMEG00000002187	SF3B3	81	83.069	ENSMAUG00000013618	Sf3b3	95	83.069	Mesocricetus_auratus
ENSAMEG00000002187	SF3B3	100	98.527	ENSMICG00000001363	SF3B3	100	98.527	Microcebus_murinus
ENSAMEG00000002187	SF3B3	100	99.590	ENSMOCG00000006108	Sf3b3	100	99.590	Microtus_ochrogaster
ENSAMEG00000002187	SF3B3	89	90.657	ENSMMOG00000002598	sf3b3	97	90.657	Mola_mola
ENSAMEG00000002187	SF3B3	100	95.168	ENSMODG00000014363	SF3B3	100	95.168	Monodelphis_domestica
ENSAMEG00000002187	SF3B3	100	93.033	ENSMALG00000008014	sf3b3	100	93.033	Monopterus_albus
ENSAMEG00000002187	SF3B3	100	99.508	MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.508	Mus_caroli
ENSAMEG00000002187	SF3B3	100	99.590	ENSMUSG00000033732	Sf3b3	100	99.590	Mus_musculus
ENSAMEG00000002187	SF3B3	100	99.508	MGP_SPRETEiJ_G0032681	Sf3b3	100	99.508	Mus_spretus
ENSAMEG00000002187	SF3B3	100	99.754	ENSMPUG00000010277	SF3B3	100	99.754	Mustela_putorius_furo
ENSAMEG00000002187	SF3B3	100	99.508	ENSMLUG00000014607	SF3B3	100	99.508	Myotis_lucifugus
ENSAMEG00000002187	SF3B3	100	99.672	ENSNGAG00000021903	Sf3b3	100	99.672	Nannospalax_galili
ENSAMEG00000002187	SF3B3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSAMEG00000002187	SF3B3	100	98.198	ENSNLEG00000016127	SF3B3	99	99.682	Nomascus_leucogenys
ENSAMEG00000002187	SF3B3	92	99.208	ENSMEUG00000004479	SF3B3	94	99.208	Notamacropus_eugenii
ENSAMEG00000002187	SF3B3	98	96.647	ENSOPRG00000009847	SF3B3	100	96.647	Ochotona_princeps
ENSAMEG00000002187	SF3B3	100	99.590	ENSODEG00000014154	SF3B3	100	99.590	Octodon_degus
ENSAMEG00000002187	SF3B3	100	93.197	ENSONIG00000011198	sf3b3	100	93.197	Oreochromis_niloticus
ENSAMEG00000002187	SF3B3	100	99.508	ENSOANG00000001161	-	100	99.508	Ornithorhynchus_anatinus
ENSAMEG00000002187	SF3B3	100	97.295	ENSOCUG00000004139	SF3B3	100	97.295	Oryctolagus_cuniculus
ENSAMEG00000002187	SF3B3	100	93.033	ENSORLG00000013472	sf3b3	100	93.033	Oryzias_latipes
ENSAMEG00000002187	SF3B3	100	93.033	ENSORLG00020017473	sf3b3	100	93.033	Oryzias_latipes_hni
ENSAMEG00000002187	SF3B3	100	93.033	ENSORLG00015007710	sf3b3	100	93.033	Oryzias_latipes_hsok
ENSAMEG00000002187	SF3B3	100	92.705	ENSOMEG00000014483	sf3b3	100	92.705	Oryzias_melastigma
ENSAMEG00000002187	SF3B3	100	99.754	ENSOGAG00000016051	SF3B3	100	99.754	Otolemur_garnettii
ENSAMEG00000002187	SF3B3	100	99.509	ENSOARG00000004816	SF3B3	100	99.509	Ovis_aries
ENSAMEG00000002187	SF3B3	100	99.672	ENSPPAG00000026807	SF3B3	100	99.672	Pan_paniscus
ENSAMEG00000002187	SF3B3	100	99.754	ENSPPRG00000001686	SF3B3	100	99.754	Panthera_pardus
ENSAMEG00000002187	SF3B3	89	96.964	ENSPTIG00000020382	SF3B3	100	96.964	Panthera_tigris_altaica
ENSAMEG00000002187	SF3B3	100	99.672	ENSPTRG00000008308	SF3B3	100	99.672	Pan_troglodytes
ENSAMEG00000002187	SF3B3	100	99.672	ENSPANG00000024075	SF3B3	100	99.672	Papio_anubis
ENSAMEG00000002187	SF3B3	100	92.459	ENSPKIG00000002712	sf3b3	100	92.459	Paramormyrops_kingsleyae
ENSAMEG00000002187	SF3B3	89	99.080	ENSPSIG00000002232	SF3B3	100	99.080	Pelodiscus_sinensis
ENSAMEG00000002187	SF3B3	100	99.590	ENSPEMG00000008603	Sf3b3	100	99.590	Peromyscus_maniculatus_bairdii
ENSAMEG00000002187	SF3B3	100	91.721	ENSPMAG00000001793	sf3b3	100	91.721	Petromyzon_marinus
ENSAMEG00000002187	SF3B3	100	99.508	ENSPCIG00000014927	SF3B3	100	99.508	Phascolarctos_cinereus
ENSAMEG00000002187	SF3B3	100	92.541	ENSPFOG00000015516	sf3b3	100	92.541	Poecilia_formosa
ENSAMEG00000002187	SF3B3	100	92.541	ENSPLAG00000014330	sf3b3	100	92.541	Poecilia_latipinna
ENSAMEG00000002187	SF3B3	100	92.623	ENSPMEG00000019856	sf3b3	100	92.623	Poecilia_mexicana
ENSAMEG00000002187	SF3B3	81	93.414	ENSPREG00000019669	sf3b3	97	93.414	Poecilia_reticulata
ENSAMEG00000002187	SF3B3	95	99.805	ENSPPYG00000007539	SF3B3	100	99.805	Pongo_abelii
ENSAMEG00000002187	SF3B3	100	78.115	ENSPCAG00000002623	SF3B3	100	78.115	Procavia_capensis
ENSAMEG00000002187	SF3B3	84	100.000	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSAMEG00000002187	SF3B3	100	99.672	ENSPVAG00000000684	SF3B3	100	99.672	Pteropus_vampyrus
ENSAMEG00000002187	SF3B3	100	93.033	ENSPNYG00000003528	sf3b3	100	93.033	Pundamilia_nyererei
ENSAMEG00000002187	SF3B3	100	93.197	ENSPNAG00000015419	sf3b3	100	93.197	Pygocentrus_nattereri
ENSAMEG00000002187	SF3B3	100	99.590	ENSRNOG00000017724	Sf3b3	100	99.590	Rattus_norvegicus
ENSAMEG00000002187	SF3B3	100	99.672	ENSRBIG00000021904	SF3B3	100	99.672	Rhinopithecus_bieti
ENSAMEG00000002187	SF3B3	100	99.672	ENSRROG00000045703	SF3B3	100	99.672	Rhinopithecus_roxellana
ENSAMEG00000002187	SF3B3	100	99.672	ENSSBOG00000029156	SF3B3	100	99.672	Saimiri_boliviensis_boliviensis
ENSAMEG00000002187	SF3B3	100	99.508	ENSSHAG00000000372	SF3B3	100	99.508	Sarcophilus_harrisii
ENSAMEG00000002187	SF3B3	100	93.607	ENSSFOG00015012877	sf3b3	100	93.607	Scleropages_formosus
ENSAMEG00000002187	SF3B3	100	92.705	ENSSMAG00000014386	sf3b3	100	92.705	Scophthalmus_maximus
ENSAMEG00000002187	SF3B3	100	93.443	ENSSDUG00000021201	sf3b3	100	93.443	Seriola_dumerili
ENSAMEG00000002187	SF3B3	100	93.361	ENSSLDG00000017532	sf3b3	100	93.361	Seriola_lalandi_dorsalis
ENSAMEG00000002187	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSAMEG00000002187	SF3B3	100	98.770	ENSSPUG00000006253	SF3B3	100	98.770	Sphenodon_punctatus
ENSAMEG00000002187	SF3B3	100	85.574	ENSSPAG00000003125	sf3b3	100	85.574	Stegastes_partitus
ENSAMEG00000002187	SF3B3	100	99.754	ENSSSCG00000025323	SF3B3	100	99.754	Sus_scrofa
ENSAMEG00000002187	SF3B3	100	98.935	ENSTGUG00000006082	SF3B3	100	98.935	Taeniopygia_guttata
ENSAMEG00000002187	SF3B3	89	92.942	ENSTNIG00000004857	sf3b3	100	92.942	Tetraodon_nigroviridis
ENSAMEG00000002187	SF3B3	93	84.460	ENSTBEG00000002946	SF3B3	100	84.460	Tupaia_belangeri
ENSAMEG00000002187	SF3B3	100	98.934	ENSTTRG00000005855	SF3B3	100	98.934	Tursiops_truncatus
ENSAMEG00000002187	SF3B3	100	99.754	ENSUAMG00000006780	SF3B3	100	99.754	Ursus_americanus
ENSAMEG00000002187	SF3B3	100	99.754	ENSUMAG00000017757	SF3B3	100	99.754	Ursus_maritimus
ENSAMEG00000002187	SF3B3	100	83.607	ENSVPAG00000003202	SF3B3	100	83.607	Vicugna_pacos
ENSAMEG00000002187	SF3B3	100	99.672	ENSVVUG00000017922	SF3B3	100	99.672	Vulpes_vulpes
ENSAMEG00000002187	SF3B3	100	96.557	ENSXETG00000032869	SF3B3	100	96.557	Xenopus_tropicalis
ENSAMEG00000002187	SF3B3	77	93.968	ENSXCOG00000013628	sf3b3	97	93.968	Xiphophorus_couchianus
ENSAMEG00000002187	SF3B3	100	92.541	ENSXMAG00000006334	sf3b3	99	93.617	Xiphophorus_maculatus