EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000002576 (Gene tree)
Gene ID: 100471718
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 5292 bases
Position: chrGL193823.1:395669-400960
Accession: 11158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000002692	LSM	PF01423.22	4.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000002807	SNRPD1-201	354	-	ENSAMEP00000002692	117 (aa)	-	G1L726

Gene Model

Click here to download ENSAMEG00000002576's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG
aml05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000002576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000002576	SNRPD1	59	33.803	ENSAMEG00000006483	LSM2	76	33.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000002576	SNRPD1	100	98.291	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSAMEG00000002576	SNRPD1	98	96.522	ENSAPOG00000019446	snrpd1	63	96.522	Acanthochromis_polyacanthus
ENSAMEG00000002576	SNRPD1	96	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSAOCG00000007406	snrpd1	98	94.872	Amphiprion_ocellaris
ENSAMEG00000002576	SNRPD1	96	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSAMEG00000002576	SNRPD1	100	90.598	ENSAPEG00000014961	snrpd1	98	90.598	Amphiprion_percula
ENSAMEG00000002576	SNRPD1	100	94.872	ENSATEG00000014399	snrpd1	100	96.429	Anabas_testudineus
ENSAMEG00000002576	SNRPD1	98	100.000	ENSAPLG00000012256	SNRPD1	97	100.000	Anas_platyrhynchos
ENSAMEG00000002576	SNRPD1	100	98.291	ENSACAG00000006364	SNRPD1	98	98.291	Anolis_carolinensis
ENSAMEG00000002576	SNRPD1	100	98.291	ENSANAG00000025641	SNRPD1	98	98.291	Aotus_nancymaae
ENSAMEG00000002576	SNRPD1	96	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSAMEG00000002576	SNRPD1	100	95.726	ENSAMXG00000004589	snrpd1	98	95.726	Astyanax_mexicanus
ENSAMEG00000002576	SNRPD1	97	94.690	ENSBTAG00000012376	-	84	94.690	Bos_taurus
ENSAMEG00000002576	SNRPD1	100	95.726	ENSBTAG00000047266	-	98	95.726	Bos_taurus
ENSAMEG00000002576	SNRPD1	97	90.351	ENSBTAG00000055316	-	91	90.351	Bos_taurus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSBTAG00000008292	SNRPD1	98	98.291	Bos_taurus
ENSAMEG00000002576	SNRPD1	74	77.907	WBGene00004916	snr-3	75	73.404	Caenorhabditis_elegans
ENSAMEG00000002576	SNRPD1	100	98.291	ENSCJAG00000042955	SNRPD1	98	98.291	Callithrix_jacchus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSCAFG00000018247	SNRPD1	98	98.291	Canis_familiaris
ENSAMEG00000002576	SNRPD1	78	100.000	ENSCAFG00020015914	SNRPD1	71	100.000	Canis_lupus_dingo
ENSAMEG00000002576	SNRPD1	100	99.145	ENSCHIG00000005557	SNRPD1	98	99.145	Capra_hircus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSTSYG00000030028	SNRPD1	98	98.291	Carlito_syrichta
ENSAMEG00000002576	SNRPD1	99	98.276	ENSCAPG00000008103	SNRPD1	100	98.276	Cavia_aperea
ENSAMEG00000002576	SNRPD1	100	98.291	ENSCPOG00000004679	SNRPD1	100	98.276	Cavia_porcellus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSCCAG00000032658	SNRPD1	98	98.291	Cebus_capucinus
ENSAMEG00000002576	SNRPD1	100	97.436	ENSCCAG00000020611	-	98	97.436	Cebus_capucinus
ENSAMEG00000002576	SNRPD1	80	93.617	ENSCCAG00000005390	-	79	93.617	Cebus_capucinus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSCCAG00000016652	-	98	94.872	Cebus_capucinus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSCATG00000039978	SNRPD1	98	98.291	Cercocebus_atys
ENSAMEG00000002576	SNRPD1	100	98.291	ENSCLAG00000008691	SNRPD1	98	98.291	Chinchilla_lanigera
ENSAMEG00000002576	SNRPD1	100	98.291	ENSCSAG00000017654	SNRPD1	98	98.291	Chlorocebus_sabaeus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSCPBG00000023143	SNRPD1	98	98.291	Chrysemys_picta_bellii
ENSAMEG00000002576	SNRPD1	70	87.805	ENSCING00000024100	-	66	87.805	Ciona_intestinalis
ENSAMEG00000002576	SNRPD1	71	85.542	ENSCSAVG00000004578	-	66	85.542	Ciona_savignyi
ENSAMEG00000002576	SNRPD1	80	73.404	ENSCGRG00001009945	-	83	73.404	Cricetulus_griseus_chok1gshd
ENSAMEG00000002576	SNRPD1	100	100.000	ENSCGRG00001021055	-	98	98.291	Cricetulus_griseus_chok1gshd
ENSAMEG00000002576	SNRPD1	100	100.000	ENSCGRG00000000490	-	98	98.291	Cricetulus_griseus_crigri
ENSAMEG00000002576	SNRPD1	80	73.404	ENSCGRG00000006224	-	83	73.404	Cricetulus_griseus_crigri
ENSAMEG00000002576	SNRPD1	79	92.473	ENSCSEG00000018141	snrpd1	79	92.553	Cynoglossus_semilaevis
ENSAMEG00000002576	SNRPD1	100	94.872	ENSCVAG00000000534	snrpd1	98	94.872	Cyprinodon_variegatus
ENSAMEG00000002576	SNRPD1	100	95.726	ENSDARG00000011648	snrpd1	98	95.726	Danio_rerio
ENSAMEG00000002576	SNRPD1	100	98.291	ENSDNOG00000040310	SNRPD1	98	98.291	Dasypus_novemcinctus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSDORG00000008349	Snrpd1	98	98.291	Dipodomys_ordii
ENSAMEG00000002576	SNRPD1	79	80.435	FBgn0261933	SmD1	74	80.435	Drosophila_melanogaster
ENSAMEG00000002576	SNRPD1	75	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSAMEG00000002576	SNRPD1	94	90.909	ENSEBUG00000003170	snrpd1	92	90.909	Eptatretus_burgeri
ENSAMEG00000002576	SNRPD1	96	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSAMEG00000002576	SNRPD1	96	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSAMEG00000002576	SNRPD1	76	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSAMEG00000002576	SNRPD1	93	83.486	ENSELUG00000000088	snrpd1	76	95.556	Esox_lucius
ENSAMEG00000002576	SNRPD1	100	98.291	ENSFCAG00000012352	SNRPD1	98	98.291	Felis_catus
ENSAMEG00000002576	SNRPD1	96	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSAMEG00000002576	SNRPD1	100	95.726	ENSGMOG00000015607	snrpd1	98	95.726	Gadus_morhua
ENSAMEG00000002576	SNRPD1	100	98.291	ENSGALG00000041334	SNRPD1	98	98.291	Gallus_gallus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSGAFG00000011171	snrpd1	98	94.872	Gambusia_affinis
ENSAMEG00000002576	SNRPD1	100	95.726	ENSGACG00000005201	SNRPD1	98	95.726	Gasterosteus_aculeatus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSGAGG00000011197	SNRPD1	98	98.291	Gopherus_agassizii
ENSAMEG00000002576	SNRPD1	80	92.553	ENSGGOG00000026706	-	78	92.553	Gorilla_gorilla
ENSAMEG00000002576	SNRPD1	100	98.291	ENSGGOG00000041053	SNRPD1	98	98.291	Gorilla_gorilla
ENSAMEG00000002576	SNRPD1	100	94.872	ENSHBUG00000003236	snrpd1	98	94.872	Haplochromis_burtoni
ENSAMEG00000002576	SNRPD1	100	98.291	ENSHGLG00000007152	SNRPD1	98	98.291	Heterocephalus_glaber_female
ENSAMEG00000002576	SNRPD1	100	98.291	ENSHGLG00100008618	SNRPD1	98	98.291	Heterocephalus_glaber_male
ENSAMEG00000002576	SNRPD1	100	94.872	ENSIPUG00000003576	snrpd1	98	94.872	Ictalurus_punctatus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSSTOG00000000485	SNRPD1	97	100.000	Ictidomys_tridecemlineatus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSJJAG00000017698	Snrpd1	98	98.291	Jaculus_jaculus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSKMAG00000005987	snrpd1	98	94.872	Kryptolebias_marmoratus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSLBEG00000003327	snrpd1	98	94.872	Labrus_bergylta
ENSAMEG00000002576	SNRPD1	100	98.291	ENSLACG00000001955	SNRPD1	98	98.291	Latimeria_chalumnae
ENSAMEG00000002576	SNRPD1	100	96.581	ENSLOCG00000002003	snrpd1	100	96.581	Lepisosteus_oculatus
ENSAMEG00000002576	SNRPD1	100	99.145	ENSLAFG00000005819	SNRPD1	99	99.145	Loxodonta_africana
ENSAMEG00000002576	SNRPD1	100	98.291	ENSMFAG00000042080	SNRPD1	98	98.291	Macaca_fascicularis
ENSAMEG00000002576	SNRPD1	97	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSAMEG00000002576	SNRPD1	100	98.291	ENSMNEG00000041296	SNRPD1	98	98.291	Macaca_nemestrina
ENSAMEG00000002576	SNRPD1	100	99.145	ENSMLEG00000028659	SNRPD1	98	98.291	Mandrillus_leucophaeus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSMAMG00000012971	snrpd1	98	94.872	Mastacembelus_armatus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSMZEG00005004685	snrpd1	98	94.872	Maylandia_zebra
ENSAMEG00000002576	SNRPD1	98	100.000	ENSMGAG00000011598	SNRPD1	95	100.000	Meleagris_gallopavo
ENSAMEG00000002576	SNRPD1	80	81.915	ENSMAUG00000016467	-	85	81.915	Mesocricetus_auratus
ENSAMEG00000002576	SNRPD1	85	94.949	ENSMAUG00000006829	-	63	94.949	Mesocricetus_auratus
ENSAMEG00000002576	SNRPD1	80	81.915	ENSMAUG00000016502	-	85	81.915	Mesocricetus_auratus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSMICG00000044066	SNRPD1	98	98.291	Microcebus_murinus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSMOCG00000017367	Snrpd1	98	98.291	Microtus_ochrogaster
ENSAMEG00000002576	SNRPD1	100	94.872	ENSMMOG00000019089	snrpd1	98	94.872	Mola_mola
ENSAMEG00000002576	SNRPD1	100	98.291	ENSMODG00000021487	SNRPD1	98	100.000	Monodelphis_domestica
ENSAMEG00000002576	SNRPD1	100	94.872	ENSMALG00000014459	snrpd1	98	94.872	Monopterus_albus
ENSAMEG00000002576	SNRPD1	100	98.291	MGP_CAROLIEiJ_G0021994	Snrpd1	98	98.291	Mus_caroli
ENSAMEG00000002576	SNRPD1	100	98.291	ENSMUSG00000002477	Snrpd1	98	98.291	Mus_musculus
ENSAMEG00000002576	SNRPD1	100	98.291	MGP_PahariEiJ_G0018731	Snrpd1	98	98.291	Mus_pahari
ENSAMEG00000002576	SNRPD1	100	98.291	MGP_SPRETEiJ_G0022910	Snrpd1	98	98.291	Mus_spretus
ENSAMEG00000002576	SNRPD1	100	100.000	ENSMPUG00000005567	-	100	100.000	Mustela_putorius_furo
ENSAMEG00000002576	SNRPD1	100	97.436	ENSMPUG00000020041	-	98	97.436	Mustela_putorius_furo
ENSAMEG00000002576	SNRPD1	99	97.414	ENSMLUG00000009124	SNRPD1	90	97.414	Myotis_lucifugus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSNGAG00000023946	Snrpd1	98	98.291	Nannospalax_galili
ENSAMEG00000002576	SNRPD1	77	95.556	ENSNBRG00000012119	snrpd1	74	95.556	Neolamprologus_brichardi
ENSAMEG00000002576	SNRPD1	100	95.726	ENSNLEG00000031430	SNRPD1	98	95.726	Nomascus_leucogenys
ENSAMEG00000002576	SNRPD1	100	98.291	ENSODEG00000005764	SNRPD1	98	98.291	Octodon_degus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSONIG00000002486	snrpd1	98	94.872	Oreochromis_niloticus
ENSAMEG00000002576	SNRPD1	84	88.776	ENSOANG00000004638	-	82	88.776	Ornithorhynchus_anatinus
ENSAMEG00000002576	SNRPD1	100	100.000	ENSOCUG00000023761	-	100	100.000	Oryctolagus_cuniculus
ENSAMEG00000002576	SNRPD1	100	97.436	ENSOCUG00000014399	-	98	97.436	Oryctolagus_cuniculus
ENSAMEG00000002576	SNRPD1	96	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSAMEG00000002576	SNRPD1	100	94.872	ENSORLG00020005743	snrpd1	98	94.872	Oryzias_latipes_hni
ENSAMEG00000002576	SNRPD1	100	94.872	ENSORLG00015013402	snrpd1	98	94.872	Oryzias_latipes_hsok
ENSAMEG00000002576	SNRPD1	100	94.872	ENSOMEG00000011571	snrpd1	98	94.872	Oryzias_melastigma
ENSAMEG00000002576	SNRPD1	100	99.145	ENSOGAG00000007833	SNRPD1	98	99.145	Otolemur_garnettii
ENSAMEG00000002576	SNRPD1	100	93.162	ENSOARG00000003413	-	83	93.162	Ovis_aries
ENSAMEG00000002576	SNRPD1	100	98.291	ENSPPAG00000042593	SNRPD1	98	98.291	Pan_paniscus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSPPRG00000002399	SNRPD1	98	98.291	Panthera_pardus
ENSAMEG00000002576	SNRPD1	80	64.894	ENSPPRG00000005009	-	88	71.296	Panthera_pardus
ENSAMEG00000002576	SNRPD1	97	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSAMEG00000002576	SNRPD1	100	98.291	ENSPTRG00000009909	SNRPD1	98	98.291	Pan_troglodytes
ENSAMEG00000002576	SNRPD1	85	92.000	ENSPTRG00000050159	-	85	92.000	Pan_troglodytes
ENSAMEG00000002576	SNRPD1	100	98.291	ENSPANG00000023478	SNRPD1	98	98.291	Papio_anubis
ENSAMEG00000002576	SNRPD1	100	95.726	ENSPKIG00000003985	SNRPD1	98	95.726	Paramormyrops_kingsleyae
ENSAMEG00000002576	SNRPD1	90	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSAMEG00000002576	SNRPD1	100	94.872	ENSPMGG00000001862	snrpd1	98	94.872	Periophthalmus_magnuspinnatus
ENSAMEG00000002576	SNRPD1	100	100.000	ENSPEMG00000014773	-	98	98.291	Peromyscus_maniculatus_bairdii
ENSAMEG00000002576	SNRPD1	85	81.373	ENSPMAG00000003938	-	84	81.373	Petromyzon_marinus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSAMEG00000002576	SNRPD1	80	93.617	ENSPFOG00000012448	SNRPD1	83	93.617	Poecilia_formosa
ENSAMEG00000002576	SNRPD1	80	93.617	ENSPLAG00000006738	snrpd1	83	93.617	Poecilia_latipinna
ENSAMEG00000002576	SNRPD1	80	93.617	ENSPMEG00000021942	snrpd1	83	93.617	Poecilia_mexicana
ENSAMEG00000002576	SNRPD1	100	94.872	ENSPREG00000007094	snrpd1	98	94.872	Poecilia_reticulata
ENSAMEG00000002576	SNRPD1	100	98.291	ENSPPYG00000025874	SNRPD1	98	98.291	Pongo_abelii
ENSAMEG00000002576	SNRPD1	100	98.291	ENSPCOG00000013327	SNRPD1	98	98.291	Propithecus_coquereli
ENSAMEG00000002576	SNRPD1	100	98.291	ENSPVAG00000005511	SNRPD1	79	98.291	Pteropus_vampyrus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSPNAG00000017824	snrpd1	98	94.872	Pygocentrus_nattereri
ENSAMEG00000002576	SNRPD1	100	98.291	ENSRNOG00000013714	Snrpd1	98	98.291	Rattus_norvegicus
ENSAMEG00000002576	SNRPD1	100	99.145	ENSRBIG00000022996	SNRPD1	98	98.291	Rhinopithecus_bieti
ENSAMEG00000002576	SNRPD1	100	99.145	ENSRROG00000027640	SNRPD1	98	98.291	Rhinopithecus_roxellana
ENSAMEG00000002576	SNRPD1	100	98.291	ENSSBOG00000020998	SNRPD1	98	98.291	Saimiri_boliviensis_boliviensis
ENSAMEG00000002576	SNRPD1	100	98.291	ENSSHAG00000011791	SNRPD1	98	98.291	Sarcophilus_harrisii
ENSAMEG00000002576	SNRPD1	94	93.636	ENSSFOG00015008809	-	92	93.636	Scleropages_formosus
ENSAMEG00000002576	SNRPD1	94	93.636	ENSSFOG00015022253	-	92	93.636	Scleropages_formosus
ENSAMEG00000002576	SNRPD1	94	93.636	ENSSMAG00000008765	snrpd1	94	95.238	Scophthalmus_maximus
ENSAMEG00000002576	SNRPD1	92	95.370	ENSSDUG00000010521	snrpd1	92	95.370	Seriola_dumerili
ENSAMEG00000002576	SNRPD1	100	94.872	ENSSLDG00000011858	snrpd1	98	94.872	Seriola_lalandi_dorsalis
ENSAMEG00000002576	SNRPD1	57	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSSPUG00000002824	SNRPD1	98	98.291	Sphenodon_punctatus
ENSAMEG00000002576	SNRPD1	96	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSAMEG00000002576	SNRPD1	98	100.000	ENSTGUG00000005095	SNRPD1	97	100.000	Taeniopygia_guttata
ENSAMEG00000002576	SNRPD1	96	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSAMEG00000002576	SNRPD1	82	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSAMEG00000002576	SNRPD1	75	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSAMEG00000002576	SNRPD1	98	100.000	ENSTTRG00000002654	SNRPD1	100	100.000	Tursiops_truncatus
ENSAMEG00000002576	SNRPD1	97	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSUMAG00000019740	SNRPD1	98	98.291	Ursus_maritimus
ENSAMEG00000002576	SNRPD1	100	98.291	ENSVPAG00000010056	SNRPD1	79	98.291	Vicugna_pacos
ENSAMEG00000002576	SNRPD1	96	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSAMEG00000002576	SNRPD1	100	96.581	ENSXETG00000027354	snrpd1	98	96.581	Xenopus_tropicalis
ENSAMEG00000002576	SNRPD1	100	94.872	ENSXCOG00000020108	snrpd1	98	94.872	Xiphophorus_couchianus
ENSAMEG00000002576	SNRPD1	100	94.872	ENSXMAG00000003368	snrpd1	98	94.872	Xiphophorus_maculatus