EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000002631 (Gene tree)
Gene ID: 100463674
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 59177 bases
Position: chrGL193138.1:173440-232616
Accession: 100463674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000002759	RTC	PF01137.21	1.2e-61	1	1
ENSAMEP00000002759	RTC_insert	PF05189.13	2.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000002878	RCL1-201	1122	-	ENSAMEP00000002759	373 (aa)	XP_002924388	D2HPJ7

Gene Model

Click here to download ENSAMEG00000002631's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000002631's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000002631	RCL1	100	97.587	ENSG00000120158	RCL1	100	97.674	Homo_sapiens
ENSAMEG00000002631	RCL1	100	80.214	ENSAPOG00000015666	rcl1	100	80.214	Acanthochromis_polyacanthus
ENSAMEG00000002631	RCL1	99	80.000	ENSACIG00000021195	rcl1	99	80.000	Amphilophus_citrinellus
ENSAMEG00000002631	RCL1	100	79.412	ENSAOCG00000002223	rcl1	100	79.412	Amphiprion_ocellaris
ENSAMEG00000002631	RCL1	100	79.679	ENSAPEG00000006905	rcl1	100	79.679	Amphiprion_percula
ENSAMEG00000002631	RCL1	99	77.568	ENSATEG00000020026	rcl1	99	77.568	Anabas_testudineus
ENSAMEG00000002631	RCL1	88	87.195	ENSAPLG00000006031	RCL1	100	87.195	Anas_platyrhynchos
ENSAMEG00000002631	RCL1	100	85.255	ENSACAG00000003640	RCL1	100	85.255	Anolis_carolinensis
ENSAMEG00000002631	RCL1	100	96.783	ENSANAG00000037372	RCL1	100	96.783	Aotus_nancymaae
ENSAMEG00000002631	RCL1	99	80.000	ENSACLG00000021724	rcl1	99	80.000	Astatotilapia_calliptera
ENSAMEG00000002631	RCL1	98	79.891	ENSAMXG00000033394	rcl1	99	79.891	Astyanax_mexicanus
ENSAMEG00000002631	RCL1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
ENSAMEG00000002631	RCL1	100	97.319	ENSCJAG00000011202	RCL1	100	97.319	Callithrix_jacchus
ENSAMEG00000002631	RCL1	100	97.855	ENSCAFG00000002091	RCL1	100	97.855	Canis_familiaris
ENSAMEG00000002631	RCL1	100	97.855	ENSCAFG00020000638	RCL1	78	97.855	Canis_lupus_dingo
ENSAMEG00000002631	RCL1	100	95.979	ENSCHIG00000012407	RCL1	100	95.979	Capra_hircus
ENSAMEG00000002631	RCL1	88	97.248	ENSTSYG00000009592	RCL1	97	97.790	Carlito_syrichta
ENSAMEG00000002631	RCL1	68	79.191	ENSCAPG00000013575	RCL1	100	79.191	Cavia_aperea
ENSAMEG00000002631	RCL1	100	96.247	ENSCPOG00000015354	RCL1	100	96.247	Cavia_porcellus
ENSAMEG00000002631	RCL1	100	97.319	ENSCCAG00000033505	RCL1	100	97.319	Cebus_capucinus
ENSAMEG00000002631	RCL1	100	96.783	ENSCATG00000034721	RCL1	100	96.783	Cercocebus_atys
ENSAMEG00000002631	RCL1	100	95.979	ENSCLAG00000007445	RCL1	100	95.979	Chinchilla_lanigera
ENSAMEG00000002631	RCL1	100	97.319	ENSCSAG00000008811	RCL1	100	97.319	Chlorocebus_sabaeus
ENSAMEG00000002631	RCL1	87	81.734	ENSCHOG00000007216	RCL1	100	81.734	Choloepus_hoffmanni
ENSAMEG00000002631	RCL1	100	89.544	ENSCPBG00000025481	RCL1	94	89.666	Chrysemys_picta_bellii
ENSAMEG00000002631	RCL1	98	59.189	ENSCING00000019565	-	98	59.189	Ciona_intestinalis
ENSAMEG00000002631	RCL1	100	97.319	ENSCANG00000027099	RCL1	100	97.319	Colobus_angolensis_palliatus
ENSAMEG00000002631	RCL1	100	96.515	ENSCGRG00001013748	Rcl1	100	96.515	Cricetulus_griseus_chok1gshd
ENSAMEG00000002631	RCL1	88	96.341	ENSCGRG00000005843	Rcl1	99	96.341	Cricetulus_griseus_crigri
ENSAMEG00000002631	RCL1	99	79.459	ENSCSEG00000000712	rcl1	97	79.459	Cynoglossus_semilaevis
ENSAMEG00000002631	RCL1	99	81.622	ENSCVAG00000011536	rcl1	99	81.622	Cyprinodon_variegatus
ENSAMEG00000002631	RCL1	98	77.929	ENSDARG00000038312	rcl1	100	77.929	Danio_rerio
ENSAMEG00000002631	RCL1	71	96.604	ENSDNOG00000019911	RCL1	100	96.604	Dasypus_novemcinctus
ENSAMEG00000002631	RCL1	100	96.515	ENSDORG00000015645	Rcl1	100	96.515	Dipodomys_ordii
ENSAMEG00000002631	RCL1	99	53.704	FBgn0020909	Rtc1	98	53.704	Drosophila_melanogaster
ENSAMEG00000002631	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSAMEG00000002631	RCL1	100	54.667	ENSEBUG00000016621	-	100	54.667	Eptatretus_burgeri
ENSAMEG00000002631	RCL1	100	97.319	ENSEASG00005010653	RCL1	100	97.319	Equus_asinus_asinus
ENSAMEG00000002631	RCL1	100	97.319	ENSECAG00000015973	RCL1	100	97.319	Equus_caballus
ENSAMEG00000002631	RCL1	100	82.574	ENSEEUG00000009801	RCL1	100	82.574	Erinaceus_europaeus
ENSAMEG00000002631	RCL1	100	77.273	ENSELUG00000007353	rcl1	100	77.273	Esox_lucius
ENSAMEG00000002631	RCL1	100	97.051	ENSFCAG00000014557	RCL1	100	97.051	Felis_catus
ENSAMEG00000002631	RCL1	95	82.817	ENSFALG00000010553	RCL1	94	82.817	Ficedula_albicollis
ENSAMEG00000002631	RCL1	88	94.801	ENSFDAG00000004209	RCL1	100	94.801	Fukomys_damarensis
ENSAMEG00000002631	RCL1	99	81.081	ENSFHEG00000011228	rcl1	99	81.081	Fundulus_heteroclitus
ENSAMEG00000002631	RCL1	99	78.919	ENSGMOG00000004677	rcl1	99	79.189	Gadus_morhua
ENSAMEG00000002631	RCL1	99	86.179	ENSGALG00000015024	RCL1	99	86.179	Gallus_gallus
ENSAMEG00000002631	RCL1	99	79.459	ENSGAFG00000007257	rcl1	99	79.459	Gambusia_affinis
ENSAMEG00000002631	RCL1	100	78.610	ENSGACG00000017474	rcl1	100	78.610	Gasterosteus_aculeatus
ENSAMEG00000002631	RCL1	100	89.544	ENSGAGG00000003689	RCL1	100	89.544	Gopherus_agassizii
ENSAMEG00000002631	RCL1	100	97.051	ENSGGOG00000015041	RCL1	100	97.051	Gorilla_gorilla
ENSAMEG00000002631	RCL1	99	80.270	ENSHBUG00000001393	rcl1	99	80.270	Haplochromis_burtoni
ENSAMEG00000002631	RCL1	100	95.979	ENSHGLG00000016452	RCL1	100	95.979	Heterocephalus_glaber_female
ENSAMEG00000002631	RCL1	100	80.429	ENSHGLG00000005368	-	100	79.893	Heterocephalus_glaber_female
ENSAMEG00000002631	RCL1	100	89.008	ENSHGLG00100008718	-	100	89.008	Heterocephalus_glaber_male
ENSAMEG00000002631	RCL1	100	81.233	ENSHGLG00100018010	-	100	80.697	Heterocephalus_glaber_male
ENSAMEG00000002631	RCL1	99	79.189	ENSHCOG00000020170	rcl1	99	79.189	Hippocampus_comes
ENSAMEG00000002631	RCL1	98	80.707	ENSIPUG00000018054	RCL1	99	80.707	Ictalurus_punctatus
ENSAMEG00000002631	RCL1	100	95.979	ENSSTOG00000000023	RCL1	100	95.979	Ictidomys_tridecemlineatus
ENSAMEG00000002631	RCL1	100	84.718	ENSJJAG00000015632	-	100	84.718	Jaculus_jaculus
ENSAMEG00000002631	RCL1	100	95.710	ENSJJAG00000022803	-	100	95.710	Jaculus_jaculus
ENSAMEG00000002631	RCL1	54	72.637	ENSJJAG00000000764	-	95	72.680	Jaculus_jaculus
ENSAMEG00000002631	RCL1	98	79.292	ENSKMAG00000011946	rcl1	99	79.292	Kryptolebias_marmoratus
ENSAMEG00000002631	RCL1	99	77.297	ENSLBEG00000003957	rcl1	99	77.297	Labrus_bergylta
ENSAMEG00000002631	RCL1	91	82.006	ENSLACG00000004594	RCL1	98	86.120	Latimeria_chalumnae
ENSAMEG00000002631	RCL1	100	83.110	ENSLOCG00000010148	rcl1	98	83.110	Lepisosteus_oculatus
ENSAMEG00000002631	RCL1	100	93.566	ENSLAFG00000017495	RCL1	100	93.566	Loxodonta_africana
ENSAMEG00000002631	RCL1	100	97.319	ENSMFAG00000037906	RCL1	100	97.319	Macaca_fascicularis
ENSAMEG00000002631	RCL1	100	97.319	ENSMNEG00000012288	RCL1	100	97.319	Macaca_nemestrina
ENSAMEG00000002631	RCL1	100	97.319	ENSMLEG00000043088	RCL1	100	97.319	Mandrillus_leucophaeus
ENSAMEG00000002631	RCL1	99	80.270	ENSMAMG00000008311	rcl1	99	80.270	Mastacembelus_armatus
ENSAMEG00000002631	RCL1	99	80.000	ENSMZEG00005017292	rcl1	99	80.000	Maylandia_zebra
ENSAMEG00000002631	RCL1	58	84.932	ENSMGAG00000002245	RCL1	97	84.906	Meleagris_gallopavo
ENSAMEG00000002631	RCL1	58	97.674	ENSMAUG00000008922	Rcl1	100	97.674	Mesocricetus_auratus
ENSAMEG00000002631	RCL1	100	95.710	ENSMICG00000015562	RCL1	100	95.710	Microcebus_murinus
ENSAMEG00000002631	RCL1	100	97.051	ENSMOCG00000012145	Rcl1	100	97.051	Microtus_ochrogaster
ENSAMEG00000002631	RCL1	99	76.819	ENSMMOG00000021264	rcl1	99	76.819	Mola_mola
ENSAMEG00000002631	RCL1	95	93.803	ENSMODG00000015377	RCL1	94	93.803	Monodelphis_domestica
ENSAMEG00000002631	RCL1	99	78.919	ENSMALG00000018618	rcl1	99	78.919	Monopterus_albus
ENSAMEG00000002631	RCL1	100	97.319	MGP_CAROLIEiJ_G0022853	Rcl1	100	97.319	Mus_caroli
ENSAMEG00000002631	RCL1	100	96.783	ENSMUSG00000024785	Rcl1	100	96.783	Mus_musculus
ENSAMEG00000002631	RCL1	100	96.783	MGP_PahariEiJ_G0014346	Rcl1	100	98.235	Mus_pahari
ENSAMEG00000002631	RCL1	100	96.515	MGP_SPRETEiJ_G0023771	Rcl1	100	97.647	Mus_spretus
ENSAMEG00000002631	RCL1	100	98.928	ENSMPUG00000004998	RCL1	100	98.928	Mustela_putorius_furo
ENSAMEG00000002631	RCL1	100	96.783	ENSMLUG00000009654	RCL1	100	96.783	Myotis_lucifugus
ENSAMEG00000002631	RCL1	100	96.783	ENSNGAG00000015327	Rcl1	100	96.783	Nannospalax_galili
ENSAMEG00000002631	RCL1	90	78.932	ENSNBRG00000019854	rcl1	96	75.419	Neolamprologus_brichardi
ENSAMEG00000002631	RCL1	100	94.370	ENSNLEG00000008891	RCL1	100	94.370	Nomascus_leucogenys
ENSAMEG00000002631	RCL1	100	87.131	ENSMEUG00000007653	RCL1	100	87.131	Notamacropus_eugenii
ENSAMEG00000002631	RCL1	100	95.979	ENSOPRG00000010965	RCL1	100	95.979	Ochotona_princeps
ENSAMEG00000002631	RCL1	88	78.916	ENSODEG00000004151	RCL1	96	79.878	Octodon_degus
ENSAMEG00000002631	RCL1	99	80.000	ENSONIG00000003871	rcl1	99	80.000	Oreochromis_niloticus
ENSAMEG00000002631	RCL1	67	86.957	ENSOANG00000013193	-	100	86.957	Ornithorhynchus_anatinus
ENSAMEG00000002631	RCL1	100	97.051	ENSOCUG00000008161	RCL1	100	97.051	Oryctolagus_cuniculus
ENSAMEG00000002631	RCL1	100	77.540	ENSORLG00000010443	rcl1	100	77.540	Oryzias_latipes
ENSAMEG00000002631	RCL1	100	77.540	ENSORLG00020012211	rcl1	100	77.540	Oryzias_latipes_hni
ENSAMEG00000002631	RCL1	100	77.273	ENSORLG00015001122	rcl1	100	77.273	Oryzias_latipes_hsok
ENSAMEG00000002631	RCL1	100	79.144	ENSOMEG00000022976	rcl1	88	79.144	Oryzias_melastigma
ENSAMEG00000002631	RCL1	100	95.710	ENSOGAG00000007480	RCL1	100	95.710	Otolemur_garnettii
ENSAMEG00000002631	RCL1	100	96.247	ENSOARG00000013463	RCL1	100	96.247	Ovis_aries
ENSAMEG00000002631	RCL1	100	97.319	ENSPPAG00000037958	RCL1	100	97.319	Pan_paniscus
ENSAMEG00000002631	RCL1	100	96.247	ENSPPRG00000022645	RCL1	100	96.247	Panthera_pardus
ENSAMEG00000002631	RCL1	87	97.239	ENSPTIG00000019031	RCL1	97	96.154	Panthera_tigris_altaica
ENSAMEG00000002631	RCL1	100	97.051	ENSPTRG00000020743	RCL1	100	97.051	Pan_troglodytes
ENSAMEG00000002631	RCL1	100	97.319	ENSPANG00000025151	RCL1	100	97.319	Papio_anubis
ENSAMEG00000002631	RCL1	100	78.877	ENSPKIG00000021022	rcl1	100	78.877	Paramormyrops_kingsleyae
ENSAMEG00000002631	RCL1	88	89.939	ENSPSIG00000012302	RCL1	100	89.939	Pelodiscus_sinensis
ENSAMEG00000002631	RCL1	100	77.807	ENSPMGG00000024007	rcl1	100	77.807	Periophthalmus_magnuspinnatus
ENSAMEG00000002631	RCL1	100	97.587	ENSPEMG00000023275	Rcl1	100	97.587	Peromyscus_maniculatus_bairdii
ENSAMEG00000002631	RCL1	97	31.233	ENSPMAG00000009110	rtca	96	31.233	Petromyzon_marinus
ENSAMEG00000002631	RCL1	100	94.102	ENSPCIG00000000188	RCL1	100	94.102	Phascolarctos_cinereus
ENSAMEG00000002631	RCL1	99	80.270	ENSPFOG00000019682	rcl1	99	80.270	Poecilia_formosa
ENSAMEG00000002631	RCL1	99	80.270	ENSPLAG00000022354	rcl1	99	80.270	Poecilia_latipinna
ENSAMEG00000002631	RCL1	99	80.270	ENSPMEG00000008131	rcl1	99	80.270	Poecilia_mexicana
ENSAMEG00000002631	RCL1	99	79.730	ENSPREG00000008032	rcl1	99	79.730	Poecilia_reticulata
ENSAMEG00000002631	RCL1	100	97.319	ENSPPYG00000019244	RCL1	100	97.319	Pongo_abelii
ENSAMEG00000002631	RCL1	100	85.523	ENSPCAG00000001440	RCL1	100	85.523	Procavia_capensis
ENSAMEG00000002631	RCL1	100	97.051	ENSPCOG00000009611	RCL1	100	97.051	Propithecus_coquereli
ENSAMEG00000002631	RCL1	100	97.319	ENSPVAG00000015752	RCL1	100	97.319	Pteropus_vampyrus
ENSAMEG00000002631	RCL1	99	80.000	ENSPNYG00000012910	rcl1	99	80.000	Pundamilia_nyererei
ENSAMEG00000002631	RCL1	99	79.893	ENSPNAG00000028307	rcl1	92	79.893	Pygocentrus_nattereri
ENSAMEG00000002631	RCL1	100	96.515	ENSRNOG00000015491	Rcl1	100	96.515	Rattus_norvegicus
ENSAMEG00000002631	RCL1	100	97.051	ENSRBIG00000035818	RCL1	100	97.051	Rhinopithecus_bieti
ENSAMEG00000002631	RCL1	100	97.319	ENSRROG00000029781	RCL1	100	97.319	Rhinopithecus_roxellana
ENSAMEG00000002631	RCL1	98	36.216	YOL010W	-	97	36.170	Saccharomyces_cerevisiae
ENSAMEG00000002631	RCL1	100	97.051	ENSSBOG00000026369	RCL1	100	97.051	Saimiri_boliviensis_boliviensis
ENSAMEG00000002631	RCL1	88	92.424	ENSSHAG00000014086	RCL1	100	92.424	Sarcophilus_harrisii
ENSAMEG00000002631	RCL1	100	79.947	ENSSFOG00015023020	rcl1	100	79.947	Scleropages_formosus
ENSAMEG00000002631	RCL1	99	80.270	ENSSMAG00000019751	rcl1	85	80.270	Scophthalmus_maximus
ENSAMEG00000002631	RCL1	100	79.144	ENSSDUG00000006349	rcl1	100	79.144	Seriola_dumerili
ENSAMEG00000002631	RCL1	100	79.412	ENSSLDG00000022076	rcl1	100	79.412	Seriola_lalandi_dorsalis
ENSAMEG00000002631	RCL1	100	96.247	ENSSARG00000009260	RCL1	100	96.247	Sorex_araneus
ENSAMEG00000002631	RCL1	100	88.204	ENSSPUG00000016330	RCL1	100	88.204	Sphenodon_punctatus
ENSAMEG00000002631	RCL1	100	80.749	ENSSPAG00000018038	rcl1	100	80.749	Stegastes_partitus
ENSAMEG00000002631	RCL1	100	97.855	ENSSSCG00000005217	RCL1	83	97.855	Sus_scrofa
ENSAMEG00000002631	RCL1	100	85.067	ENSTGUG00000005138	RCL1	100	85.067	Taeniopygia_guttata
ENSAMEG00000002631	RCL1	99	79.730	ENSTRUG00000010493	rcl1	99	79.730	Takifugu_rubripes
ENSAMEG00000002631	RCL1	99	78.049	ENSTNIG00000013214	rcl1	99	78.049	Tetraodon_nigroviridis
ENSAMEG00000002631	RCL1	100	90.349	ENSTBEG00000016339	RCL1	100	90.349	Tupaia_belangeri
ENSAMEG00000002631	RCL1	100	96.783	ENSTTRG00000016525	RCL1	100	96.783	Tursiops_truncatus
ENSAMEG00000002631	RCL1	100	100.000	ENSUAMG00000005598	RCL1	100	100.000	Ursus_americanus
ENSAMEG00000002631	RCL1	88	99.388	ENSUMAG00000017890	RCL1	97	99.388	Ursus_maritimus
ENSAMEG00000002631	RCL1	88	98.165	ENSVPAG00000009188	RCL1	100	98.165	Vicugna_pacos
ENSAMEG00000002631	RCL1	88	98.171	ENSVVUG00000007304	RCL1	89	98.171	Vulpes_vulpes
ENSAMEG00000002631	RCL1	100	75.668	ENSXETG00000000592	rcl1	100	75.668	Xenopus_tropicalis
ENSAMEG00000002631	RCL1	59	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSAMEG00000002631	RCL1	99	80.270	ENSXCOG00000004922	rcl1	99	80.270	Xiphophorus_couchianus
ENSAMEG00000002631	RCL1	99	80.270	ENSXMAG00000022366	RCL1	99	80.270	Xiphophorus_maculatus