EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000002635 (Gene tree)
Gene ID: 100476292
Gene Symbol: SRSF1
Alias: -
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 1703 bases
Position: chrGL192439.1:147610-149312
Accession: 10780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000002765	RRM_1	PF00076.22	8.9e-34	1	2
ENSAMEP00000002765	RRM_1	PF00076.22	8.9e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000002884	SRSF1-201	726	-	ENSAMEP00000002765	241 (aa)	-	G1L799

Gene Model

Click here to download ENSAMEG00000002635's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG
aml04657	IL-17 signaling pathway	KEGG
aml05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000002635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000002635	SRSF1	72	74.138	ENSAMEG00000013294	SRSF9	81	71.429
ENSAMEG00000002635	SRSF1	63	45.509	ENSAMEG00000014574	SRSF5	60	43.114

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000002635	SRSF1	100	97.177	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSAMEG00000002635	SRSF1	79	91.053	ENSAPOG00000008542	-	81	88.177	Acanthochromis_polyacanthus
ENSAMEG00000002635	SRSF1	77	89.529	ENSAPOG00000002748	-	78	88.482	Acanthochromis_polyacanthus
ENSAMEG00000002635	SRSF1	77	90.000	ENSACIG00000008091	srsf1a	83	88.421	Amphilophus_citrinellus
ENSAMEG00000002635	SRSF1	79	86.700	ENSAOCG00000000337	-	82	88.177	Amphiprion_ocellaris
ENSAMEG00000002635	SRSF1	77	89.529	ENSAOCG00000010671	-	83	89.005	Amphiprion_ocellaris
ENSAMEG00000002635	SRSF1	79	86.700	ENSAPEG00000023352	-	81	88.177	Amphiprion_percula
ENSAMEG00000002635	SRSF1	77	89.529	ENSAPEG00000009915	-	83	89.005	Amphiprion_percula
ENSAMEG00000002635	SRSF1	81	88.000	ENSATEG00000021567	-	82	88.660	Anabas_testudineus
ENSAMEG00000002635	SRSF1	77	89.529	ENSATEG00000022403	-	77	89.005	Anabas_testudineus
ENSAMEG00000002635	SRSF1	100	95.565	ENSACAG00000005542	-	100	95.565	Anolis_carolinensis
ENSAMEG00000002635	SRSF1	99	97.154	ENSANAG00000020583	-	99	98.611	Aotus_nancymaae
ENSAMEG00000002635	SRSF1	80	72.021	ENSANAG00000025417	-	75	70.526	Aotus_nancymaae
ENSAMEG00000002635	SRSF1	52	74.839	ENSAMXG00000024373	-	72	76.129	Astyanax_mexicanus
ENSAMEG00000002635	SRSF1	94	89.958	ENSAMXG00000035996	srsf1a	79	86.935	Astyanax_mexicanus
ENSAMEG00000002635	SRSF1	100	97.177	ENSBTAG00000014766	SRSF1	100	97.177	Bos_taurus
ENSAMEG00000002635	SRSF1	78	88.776	ENSCJAG00000008111	-	88	87.310	Callithrix_jacchus
ENSAMEG00000002635	SRSF1	99	97.154	ENSCJAG00000041713	-	99	98.611	Callithrix_jacchus
ENSAMEG00000002635	SRSF1	99	97.154	ENSCAFG00000017430	SRSF1	97	97.154	Canis_familiaris
ENSAMEG00000002635	SRSF1	99	97.154	ENSCAFG00020025632	-	97	97.154	Canis_lupus_dingo
ENSAMEG00000002635	SRSF1	100	97.177	ENSCHIG00000010787	SRSF1	100	97.177	Capra_hircus
ENSAMEG00000002635	SRSF1	99	97.154	ENSTSYG00000013899	-	99	98.611	Carlito_syrichta
ENSAMEG00000002635	SRSF1	100	97.177	ENSCPOG00000032681	-	100	97.177	Cavia_porcellus
ENSAMEG00000002635	SRSF1	100	97.177	ENSCCAG00000029484	-	99	98.611	Cebus_capucinus
ENSAMEG00000002635	SRSF1	99	97.154	ENSCATG00000042294	-	99	98.611	Cercocebus_atys
ENSAMEG00000002635	SRSF1	100	97.177	ENSCLAG00000014707	-	100	97.177	Chinchilla_lanigera
ENSAMEG00000002635	SRSF1	99	96.341	ENSCSAG00000005642	-	97	96.341	Chlorocebus_sabaeus
ENSAMEG00000002635	SRSF1	100	97.177	ENSCHOG00000001899	SRSF1	100	97.177	Choloepus_hoffmanni
ENSAMEG00000002635	SRSF1	100	95.968	ENSCPBG00000009851	-	100	95.968	Chrysemys_picta_bellii
ENSAMEG00000002635	SRSF1	99	97.154	ENSCANG00000029726	-	99	98.611	Colobus_angolensis_palliatus
ENSAMEG00000002635	SRSF1	99	97.154	ENSCGRG00001000670	Srsf1	97	97.154	Cricetulus_griseus_chok1gshd
ENSAMEG00000002635	SRSF1	100	97.177	ENSCGRG00000005590	Srsf1	100	97.177	Cricetulus_griseus_crigri
ENSAMEG00000002635	SRSF1	77	89.785	ENSCSEG00000014272	-	81	86.559	Cynoglossus_semilaevis
ENSAMEG00000002635	SRSF1	78	80.189	ENSCSEG00000009973	-	81	81.132	Cynoglossus_semilaevis
ENSAMEG00000002635	SRSF1	77	87.692	ENSCVAG00000005458	-	91	86.339	Cyprinodon_variegatus
ENSAMEG00000002635	SRSF1	77	89.529	ENSCVAG00000018617	-	78	89.005	Cyprinodon_variegatus
ENSAMEG00000002635	SRSF1	78	87.745	ENSDARG00000057691	srsf1a	99	85.864	Danio_rerio
ENSAMEG00000002635	SRSF1	99	93.878	ENSDARG00000017843	srsf1b	99	93.878	Danio_rerio
ENSAMEG00000002635	SRSF1	99	97.154	ENSDNOG00000011737	-	97	97.154	Dasypus_novemcinctus
ENSAMEG00000002635	SRSF1	100	97.177	ENSDORG00000015082	Srsf1	100	97.177	Dipodomys_ordii
ENSAMEG00000002635	SRSF1	73	95.109	ENSETEG00000005349	-	63	95.109	Echinops_telfairi
ENSAMEG00000002635	SRSF1	99	97.154	ENSEASG00005002922	-	97	97.154	Equus_asinus_asinus
ENSAMEG00000002635	SRSF1	100	97.177	ENSECAG00000016654	SRSF1	100	97.177	Equus_caballus
ENSAMEG00000002635	SRSF1	73	96.196	ENSEEUG00000009255	-	63	96.196	Erinaceus_europaeus
ENSAMEG00000002635	SRSF1	78	90.155	ENSELUG00000021646	srsf1a	77	89.637	Esox_lucius
ENSAMEG00000002635	SRSF1	99	97.154	ENSFCAG00000002250	-	97	97.154	Felis_catus
ENSAMEG00000002635	SRSF1	80	100.000	ENSFALG00000005062	-	78	72.081	Ficedula_albicollis
ENSAMEG00000002635	SRSF1	100	97.177	ENSFDAG00000010646	-	100	97.177	Fukomys_damarensis
ENSAMEG00000002635	SRSF1	77	89.529	ENSFHEG00000003174	srsf1a	83	89.005	Fundulus_heteroclitus
ENSAMEG00000002635	SRSF1	92	87.330	ENSGMOG00000014787	-	80	87.634	Gadus_morhua
ENSAMEG00000002635	SRSF1	100	95.968	ENSGALG00000005525	SRSF1	100	95.968	Gallus_gallus
ENSAMEG00000002635	SRSF1	79	88.421	ENSGACG00000020621	srsf1b	80	85.789	Gasterosteus_aculeatus
ENSAMEG00000002635	SRSF1	99	95.935	ENSGAGG00000022965	-	97	95.935	Gopherus_agassizii
ENSAMEG00000002635	SRSF1	99	97.154	ENSGGOG00000004386	SRSF1	99	98.611	Gorilla_gorilla
ENSAMEG00000002635	SRSF1	77	90.000	ENSHBUG00000016788	srsf1a	80	88.421	Haplochromis_burtoni
ENSAMEG00000002635	SRSF1	86	96.744	ENSHGLG00000000600	-	100	96.744	Heterocephalus_glaber_female
ENSAMEG00000002635	SRSF1	86	96.744	ENSHGLG00000000669	-	100	96.744	Heterocephalus_glaber_female
ENSAMEG00000002635	SRSF1	100	97.177	ENSHGLG00100016906	-	100	97.177	Heterocephalus_glaber_male
ENSAMEG00000002635	SRSF1	77	85.279	ENSHCOG00000018918	srsf1a	77	84.264	Hippocampus_comes
ENSAMEG00000002635	SRSF1	79	93.367	ENSIPUG00000008750	srsf1b	80	92.347	Ictalurus_punctatus
ENSAMEG00000002635	SRSF1	94	89.540	ENSIPUG00000017039	srsf1a	79	87.437	Ictalurus_punctatus
ENSAMEG00000002635	SRSF1	100	97.177	ENSSTOG00000000243	-	100	97.177	Ictidomys_tridecemlineatus
ENSAMEG00000002635	SRSF1	50	84.921	ENSJJAG00000014464	-	66	97.727	Jaculus_jaculus
ENSAMEG00000002635	SRSF1	100	97.177	ENSJJAG00000000102	-	100	97.177	Jaculus_jaculus
ENSAMEG00000002635	SRSF1	77	89.583	ENSKMAG00000019232	srsf1a	78	88.542	Kryptolebias_marmoratus
ENSAMEG00000002635	SRSF1	79	83.000	ENSLBEG00000015294	-	80	82.000	Labrus_bergylta
ENSAMEG00000002635	SRSF1	77	88.482	ENSLBEG00000020864	-	83	87.958	Labrus_bergylta
ENSAMEG00000002635	SRSF1	99	95.492	ENSLACG00000014160	srsf1a	92	95.492	Latimeria_chalumnae
ENSAMEG00000002635	SRSF1	100	95.142	ENSLOCG00000005994	srsf1a	100	95.142	Lepisosteus_oculatus
ENSAMEG00000002635	SRSF1	100	97.177	ENSLAFG00000025743	SRSF1	100	97.177	Loxodonta_africana
ENSAMEG00000002635	SRSF1	100	97.177	ENSMFAG00000040003	-	99	98.611	Macaca_fascicularis
ENSAMEG00000002635	SRSF1	99	97.154	ENSMMUG00000004725	SRSF1	99	98.611	Macaca_mulatta
ENSAMEG00000002635	SRSF1	99	94.309	ENSMMUG00000003260	-	97	94.309	Macaca_mulatta
ENSAMEG00000002635	SRSF1	99	93.902	ENSMNEG00000015983	-	97	93.902	Macaca_nemestrina
ENSAMEG00000002635	SRSF1	99	97.154	ENSMNEG00000027680	-	99	98.611	Macaca_nemestrina
ENSAMEG00000002635	SRSF1	99	95.436	ENSMLEG00000015243	-	97	95.436	Mandrillus_leucophaeus
ENSAMEG00000002635	SRSF1	100	97.177	ENSMLEG00000040509	SRSF1	100	97.177	Mandrillus_leucophaeus
ENSAMEG00000002635	SRSF1	79	92.857	ENSMAMG00000019691	-	81	91.837	Mastacembelus_armatus
ENSAMEG00000002635	SRSF1	77	89.529	ENSMAMG00000018454	-	78	89.005	Mastacembelus_armatus
ENSAMEG00000002635	SRSF1	79	91.099	ENSMAMG00000019687	-	80	91.099	Mastacembelus_armatus
ENSAMEG00000002635	SRSF1	100	97.177	ENSMAUG00000021845	Srsf1	100	97.177	Mesocricetus_auratus
ENSAMEG00000002635	SRSF1	99	97.154	ENSMICG00000013639	-	99	98.611	Microcebus_murinus
ENSAMEG00000002635	SRSF1	100	97.177	ENSMOCG00000001996	Srsf1	100	97.177	Microtus_ochrogaster
ENSAMEG00000002635	SRSF1	77	87.958	ENSMMOG00000014354	srsf1a	83	86.911	Mola_mola
ENSAMEG00000002635	SRSF1	73	95.135	ENSMODG00000014781	-	63	95.135	Monodelphis_domestica
ENSAMEG00000002635	SRSF1	77	89.529	ENSMALG00000017129	-	75	88.482	Monopterus_albus
ENSAMEG00000002635	SRSF1	82	80.711	ENSMALG00000007763	-	79	84.737	Monopterus_albus
ENSAMEG00000002635	SRSF1	100	97.177	MGP_CAROLIEiJ_G0016943	Srsf1	100	97.177	Mus_caroli
ENSAMEG00000002635	SRSF1	100	97.177	ENSMUSG00000018379	Srsf1	100	97.177	Mus_musculus
ENSAMEG00000002635	SRSF1	100	97.177	MGP_PahariEiJ_G0018074	Srsf1	100	97.177	Mus_pahari
ENSAMEG00000002635	SRSF1	100	97.177	MGP_SPRETEiJ_G0017790	Srsf1	100	97.177	Mus_spretus
ENSAMEG00000002635	SRSF1	100	97.177	ENSMPUG00000015369	SRSF1	100	97.177	Mustela_putorius_furo
ENSAMEG00000002635	SRSF1	100	97.177	ENSMLUG00000011040	SRSF1	100	97.177	Myotis_lucifugus
ENSAMEG00000002635	SRSF1	81	90.355	ENSMLUG00000023995	-	79	91.099	Myotis_lucifugus
ENSAMEG00000002635	SRSF1	100	97.177	ENSNGAG00000011395	Srsf1	100	97.177	Nannospalax_galili
ENSAMEG00000002635	SRSF1	100	82.988	ENSNBRG00000008041	srsf1b	80	82.632	Neolamprologus_brichardi
ENSAMEG00000002635	SRSF1	99	97.154	ENSNLEG00000008088	-	99	98.611	Nomascus_leucogenys
ENSAMEG00000002635	SRSF1	73	96.175	ENSOPRG00000001234	-	100	96.175	Ochotona_princeps
ENSAMEG00000002635	SRSF1	100	96.774	ENSODEG00000011481	-	100	96.774	Octodon_degus
ENSAMEG00000002635	SRSF1	77	90.000	ENSONIG00000013160	-	77	88.421	Oreochromis_niloticus
ENSAMEG00000002635	SRSF1	95	88.983	ENSONIG00000004860	-	81	90.816	Oreochromis_niloticus
ENSAMEG00000002635	SRSF1	100	71.138	ENSOCUG00000010894	-	77	73.016	Oryctolagus_cuniculus
ENSAMEG00000002635	SRSF1	77	89.529	ENSORLG00000004580	srsf1a	78	89.005	Oryzias_latipes
ENSAMEG00000002635	SRSF1	77	89.529	ENSORLG00020009456	srsf1a	83	89.005	Oryzias_latipes_hni
ENSAMEG00000002635	SRSF1	77	89.529	ENSORLG00015014384	srsf1a	83	89.005	Oryzias_latipes_hsok
ENSAMEG00000002635	SRSF1	70	87.356	ENSOMEG00000004106	srsf1a	71	86.207	Oryzias_melastigma
ENSAMEG00000002635	SRSF1	100	97.177	ENSOGAG00000025950	-	100	97.177	Otolemur_garnettii
ENSAMEG00000002635	SRSF1	100	96.680	ENSOARG00000008323	SRSF1	100	96.680	Ovis_aries
ENSAMEG00000002635	SRSF1	100	97.177	ENSPPAG00000043403	-	99	98.611	Pan_paniscus
ENSAMEG00000002635	SRSF1	100	97.177	ENSPPRG00000004238	-	100	97.177	Panthera_pardus
ENSAMEG00000002635	SRSF1	99	97.154	ENSPTRG00000049077	SRSF1	99	98.611	Pan_troglodytes
ENSAMEG00000002635	SRSF1	99	77.824	ENSPANG00000030275	-	80	92.647	Papio_anubis
ENSAMEG00000002635	SRSF1	99	97.154	ENSPANG00000022305	-	99	98.611	Papio_anubis
ENSAMEG00000002635	SRSF1	79	93.367	ENSPKIG00000012857	srsf1b	80	92.347	Paramormyrops_kingsleyae
ENSAMEG00000002635	SRSF1	78	92.708	ENSPKIG00000007204	srsf1a	83	91.623	Paramormyrops_kingsleyae
ENSAMEG00000002635	SRSF1	79	87.437	ENSPSIG00000009000	-	78	93.056	Pelodiscus_sinensis
ENSAMEG00000002635	SRSF1	77	90.860	ENSPMGG00000013112	-	82	87.097	Periophthalmus_magnuspinnatus
ENSAMEG00000002635	SRSF1	96	85.837	ENSPMGG00000005467	-	77	88.827	Periophthalmus_magnuspinnatus
ENSAMEG00000002635	SRSF1	100	97.177	ENSPEMG00000021416	Srsf1	100	97.177	Peromyscus_maniculatus_bairdii
ENSAMEG00000002635	SRSF1	100	96.386	ENSPCIG00000006076	-	100	96.386	Phascolarctos_cinereus
ENSAMEG00000002635	SRSF1	79	87.879	ENSPFOG00000018325	-	70	84.536	Poecilia_formosa
ENSAMEG00000002635	SRSF1	79	87.879	ENSPLAG00000008416	srsf1b	79	85.567	Poecilia_latipinna
ENSAMEG00000002635	SRSF1	79	87.879	ENSPMEG00000002388	-	79	85.567	Poecilia_mexicana
ENSAMEG00000002635	SRSF1	77	89.529	ENSPREG00000009667	srsf1a	78	89.005	Poecilia_reticulata
ENSAMEG00000002635	SRSF1	100	97.177	ENSPPYG00000008240	SRSF1	100	97.177	Pongo_abelii
ENSAMEG00000002635	SRSF1	100	97.177	ENSPCAG00000005199	SRSF1	100	97.177	Procavia_capensis
ENSAMEG00000002635	SRSF1	100	97.177	ENSPCOG00000023654	-	99	98.611	Propithecus_coquereli
ENSAMEG00000002635	SRSF1	80	73.762	ENSPCOG00000025736	-	95	76.190	Propithecus_coquereli
ENSAMEG00000002635	SRSF1	77	100.000	ENSPVAG00000000519	-	75	100.000	Pteropus_vampyrus
ENSAMEG00000002635	SRSF1	79	92.708	ENSPNAG00000014601	srsf1b	80	92.188	Pygocentrus_nattereri
ENSAMEG00000002635	SRSF1	94	91.775	ENSPNAG00000022241	srsf1a	78	90.052	Pygocentrus_nattereri
ENSAMEG00000002635	SRSF1	100	97.177	ENSRNOG00000050323	Srsf1	100	97.177	Rattus_norvegicus
ENSAMEG00000002635	SRSF1	99	97.154	ENSRBIG00000034445	-	99	98.611	Rhinopithecus_bieti
ENSAMEG00000002635	SRSF1	100	97.177	ENSRROG00000041506	-	99	98.611	Rhinopithecus_roxellana
ENSAMEG00000002635	SRSF1	100	97.177	ENSSBOG00000025377	-	99	98.611	Saimiri_boliviensis_boliviensis
ENSAMEG00000002635	SRSF1	100	96.386	ENSSHAG00000002552	-	100	96.386	Sarcophilus_harrisii
ENSAMEG00000002635	SRSF1	99	94.694	ENSSFOG00015004800	srsf1a	99	94.694	Scleropages_formosus
ENSAMEG00000002635	SRSF1	77	88.482	ENSSMAG00000007018	-	78	87.435	Scophthalmus_maximus
ENSAMEG00000002635	SRSF1	94	84.583	ENSSMAG00000009719	-	80	83.333	Scophthalmus_maximus
ENSAMEG00000002635	SRSF1	77	88.482	ENSSDUG00000011303	-	83	87.958	Seriola_dumerili
ENSAMEG00000002635	SRSF1	100	76.494	ENSSDUG00000003929	-	84	79.500	Seriola_dumerili
ENSAMEG00000002635	SRSF1	77	88.482	ENSSLDG00000010543	-	78	87.435	Seriola_lalandi_dorsalis
ENSAMEG00000002635	SRSF1	95	75.319	ENSSLDG00000016895	-	78	82.258	Seriola_lalandi_dorsalis
ENSAMEG00000002635	SRSF1	79	81.675	ENSSLDG00000016868	-	78	86.387	Seriola_lalandi_dorsalis
ENSAMEG00000002635	SRSF1	73	96.196	ENSSARG00000010949	-	63	96.196	Sorex_araneus
ENSAMEG00000002635	SRSF1	99	95.935	ENSSPUG00000000804	-	97	95.935	Sphenodon_punctatus
ENSAMEG00000002635	SRSF1	79	83.732	ENSSPAG00000014152	-	81	85.167	Stegastes_partitus
ENSAMEG00000002635	SRSF1	77	89.583	ENSSPAG00000022562	-	78	89.062	Stegastes_partitus
ENSAMEG00000002635	SRSF1	100	97.177	ENSSSCG00000017626	-	100	97.177	Sus_scrofa
ENSAMEG00000002635	SRSF1	73	94.565	ENSTGUG00000008416	-	100	94.565	Taeniopygia_guttata
ENSAMEG00000002635	SRSF1	77	88.482	ENSTRUG00000003691	srsf1a	78	87.958	Takifugu_rubripes
ENSAMEG00000002635	SRSF1	77	88.482	ENSTNIG00000016223	srsf1a	77	87.958	Tetraodon_nigroviridis
ENSAMEG00000002635	SRSF1	73	94.565	ENSTBEG00000015378	-	63	94.565	Tupaia_belangeri
ENSAMEG00000002635	SRSF1	73	96.175	ENSTTRG00000007310	SRSF1	100	96.175	Tursiops_truncatus
ENSAMEG00000002635	SRSF1	100	97.177	ENSUAMG00000009858	SRSF1	100	97.177	Ursus_americanus
ENSAMEG00000002635	SRSF1	99	97.154	ENSUMAG00000000455	-	97	97.154	Ursus_maritimus
ENSAMEG00000002635	SRSF1	100	96.774	ENSVPAG00000010094	SRSF1	100	96.774	Vicugna_pacos
ENSAMEG00000002635	SRSF1	99	97.154	ENSVVUG00000011882	-	97	97.154	Vulpes_vulpes
ENSAMEG00000002635	SRSF1	100	89.139	ENSXETG00000008954	srsf1	100	89.139	Xenopus_tropicalis
ENSAMEG00000002635	SRSF1	77	89.529	ENSXMAG00000011766	srsf1a	78	89.005	Xiphophorus_maculatus