EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000002748 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 76961 bases
Position: chrGL192894.1:1139166-1216126
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000002894	La	PF05383.17	3.1e-22	1	1
ENSAMEP00000002890	La	PF05383.17	7.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000003012	LARP1B-201	1647	-	ENSAMEP00000002890	549 (aa)	-	G1L7M4
ENSAMET00000003016	LARP1B-202	1008	-	ENSAMEP00000002894	335 (aa)	-	G1L7M8

Gene Model

Click here to download ENSAMEG00000002748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000002748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000002748	LARP1B	99	55.882	ENSAMEG00000016673	LARP1	60	55.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000002748	LARP1B	100	91.642	ENSG00000138709	LARP1B	96	95.833	Homo_sapiens
ENSAMEG00000002748	LARP1B	100	51.952	ENSAPOG00000020101	larp1b	54	52.122	Acanthochromis_polyacanthus
ENSAMEG00000002748	LARP1B	100	49.483	ENSACIG00000023890	larp1b	51	49.483	Amphilophus_citrinellus
ENSAMEG00000002748	LARP1B	98	51.361	ENSAOCG00000014268	larp1b	57	52.174	Amphiprion_ocellaris
ENSAMEG00000002748	LARP1B	100	52.941	ENSAPEG00000004126	larp1b	53	53.368	Amphiprion_percula
ENSAMEG00000002748	LARP1B	99	52.083	ENSATEG00000017849	larp1b	53	52.604	Anabas_testudineus
ENSAMEG00000002748	LARP1B	98	65.256	ENSAPLG00000010129	LARP1B	62	65.088	Anas_platyrhynchos
ENSAMEG00000002748	LARP1B	99	75.451	ENSACAG00000011338	LARP1B	56	75.451	Anolis_carolinensis
ENSAMEG00000002748	LARP1B	100	84.211	ENSANAG00000034618	LARP1B	96	80.967	Aotus_nancymaae
ENSAMEG00000002748	LARP1B	99	52.069	ENSACLG00000011948	larp1b	53	52.414	Astatotilapia_calliptera
ENSAMEG00000002748	LARP1B	74	59.545	ENSAMXG00000006805	larp1b	52	50.859	Astyanax_mexicanus
ENSAMEG00000002748	LARP1B	99	91.470	ENSBTAG00000012135	LARP1B	98	90.838	Bos_taurus
ENSAMEG00000002748	LARP1B	100	93.134	ENSCJAG00000003338	LARP1B	100	93.134	Callithrix_jacchus
ENSAMEG00000002748	LARP1B	100	96.745	ENSCAFG00000003831	LARP1B	60	97.273	Canis_familiaris
ENSAMEG00000002748	LARP1B	100	97.096	ENSCAFG00020018899	LARP1B	100	97.015	Canis_lupus_dingo
ENSAMEG00000002748	LARP1B	100	91.667	ENSCHIG00000023144	LARP1B	100	91.667	Capra_hircus
ENSAMEG00000002748	LARP1B	98	86.322	ENSTSYG00000002037	-	93	86.322	Carlito_syrichta
ENSAMEG00000002748	LARP1B	76	97.321	ENSCPOG00000034668	-	93	97.321	Cavia_porcellus
ENSAMEG00000002748	LARP1B	99	93.413	ENSCCAG00000021948	LARP1B	99	93.413	Cebus_capucinus
ENSAMEG00000002748	LARP1B	100	89.818	ENSCATG00000013541	LARP1B	100	88.955	Cercocebus_atys
ENSAMEG00000002748	LARP1B	100	87.761	ENSCLAG00000006448	-	100	87.761	Chinchilla_lanigera
ENSAMEG00000002748	LARP1B	99	91.470	ENSCSAG00000003582	LARP1B	60	91.470	Chlorocebus_sabaeus
ENSAMEG00000002748	LARP1B	99	82.577	ENSCHOG00000005354	LARP1B	62	82.396	Choloepus_hoffmanni
ENSAMEG00000002748	LARP1B	99	77.617	ENSCPBG00000017480	LARP1B	52	77.617	Chrysemys_picta_bellii
ENSAMEG00000002748	LARP1B	100	83.094	ENSCANG00000026958	LARP1B	99	81.996	Colobus_angolensis_palliatus
ENSAMEG00000002748	LARP1B	100	91.343	ENSCGRG00001004660	-	100	91.343	Cricetulus_griseus_chok1gshd
ENSAMEG00000002748	LARP1B	100	91.045	ENSCGRG00000001914	-	100	91.045	Cricetulus_griseus_crigri
ENSAMEG00000002748	LARP1B	99	46.980	ENSCSEG00000013519	larp1b	53	50.676	Cynoglossus_semilaevis
ENSAMEG00000002748	LARP1B	99	52.389	ENSCVAG00000005046	larp1b	53	52.730	Cyprinodon_variegatus
ENSAMEG00000002748	LARP1B	98	91.793	ENSDNOG00000018765	-	99	90.784	Dasypus_novemcinctus
ENSAMEG00000002748	LARP1B	98	45.439	ENSEBUG00000003668	larp1b	58	46.053	Eptatretus_burgeri
ENSAMEG00000002748	LARP1B	99	95.509	ENSEASG00005018106	LARP1B	99	95.509	Equus_asinus_asinus
ENSAMEG00000002748	LARP1B	98	95.441	ENSECAG00000001088	LARP1B	50	93.636	Equus_caballus
ENSAMEG00000002748	LARP1B	67	56.423	ENSELUG00000023774	larp1b	69	46.259	Esox_lucius
ENSAMEG00000002748	LARP1B	100	96.119	ENSFCAG00000014650	-	100	96.119	Felis_catus
ENSAMEG00000002748	LARP1B	98	67.976	ENSFALG00000008098	LARP1B	59	68.306	Ficedula_albicollis
ENSAMEG00000002748	LARP1B	99	52.811	ENSFHEG00000010264	larp1b	51	52.821	Fundulus_heteroclitus
ENSAMEG00000002748	LARP1B	98	69.486	ENSGALG00000010207	LARP1B	53	69.174	Gallus_gallus
ENSAMEG00000002748	LARP1B	89	55.664	ENSGAFG00000012012	larp1b	57	56.126	Gambusia_affinis
ENSAMEG00000002748	LARP1B	99	46.805	ENSGACG00000004609	larp1b	52	49.310	Gasterosteus_aculeatus
ENSAMEG00000002748	LARP1B	99	77.477	ENSGAGG00000017209	LARP1B	52	77.477	Gopherus_agassizii
ENSAMEG00000002748	LARP1B	100	91.642	ENSGGOG00000015900	LARP1B	100	91.642	Gorilla_gorilla
ENSAMEG00000002748	LARP1B	99	52.249	ENSHBUG00000009730	larp1b	53	52.595	Haplochromis_burtoni
ENSAMEG00000002748	LARP1B	100	85.841	ENSHGLG00000006728	-	99	86.136	Heterocephalus_glaber_female
ENSAMEG00000002748	LARP1B	98	75.076	ENSHGLG00000013922	-	97	75.152	Heterocephalus_glaber_female
ENSAMEG00000002748	LARP1B	98	75.076	ENSHGLG00100016491	-	97	75.152	Heterocephalus_glaber_male
ENSAMEG00000002748	LARP1B	100	86.567	ENSHGLG00100014041	-	96	86.567	Heterocephalus_glaber_male
ENSAMEG00000002748	LARP1B	64	57.939	ENSHCOG00000000918	larp1b	51	58.774	Hippocampus_comes
ENSAMEG00000002748	LARP1B	91	65.686	ENSSTOG00000033183	-	100	66.993	Ictidomys_tridecemlineatus
ENSAMEG00000002748	LARP1B	100	90.179	ENSSTOG00000008596	-	100	90.179	Ictidomys_tridecemlineatus
ENSAMEG00000002748	LARP1B	99	81.571	ENSSTOG00000021917	-	94	82.779	Ictidomys_tridecemlineatus
ENSAMEG00000002748	LARP1B	96	74.766	ENSSTOG00000034510	-	87	74.766	Ictidomys_tridecemlineatus
ENSAMEG00000002748	LARP1B	99	88.922	ENSJJAG00000022360	Larp1b	99	88.922	Jaculus_jaculus
ENSAMEG00000002748	LARP1B	99	48.705	ENSKMAG00000011589	larp1b	54	50.604	Kryptolebias_marmoratus
ENSAMEG00000002748	LARP1B	99	52.080	ENSLBEG00000005655	larp1b	53	52.405	Labrus_bergylta
ENSAMEG00000002748	LARP1B	99	72.333	ENSLACG00000015247	LARP1B	100	70.738	Latimeria_chalumnae
ENSAMEG00000002748	LARP1B	99	60.274	ENSLOCG00000010684	larp1b	58	63.014	Lepisosteus_oculatus
ENSAMEG00000002748	LARP1B	99	94.345	ENSLAFG00000008473	-	99	94.345	Loxodonta_africana
ENSAMEG00000002748	LARP1B	69	90.345	ENSMFAG00000003306	-	93	90.345	Macaca_fascicularis
ENSAMEG00000002748	LARP1B	100	92.537	ENSMFAG00000002218	LARP1B	100	92.537	Macaca_fascicularis
ENSAMEG00000002748	LARP1B	100	92.537	ENSMMUG00000021347	LARP1B	100	92.537	Macaca_mulatta
ENSAMEG00000002748	LARP1B	86	86.667	ENSMNEG00000030406	LARP1B	56	86.667	Macaca_nemestrina
ENSAMEG00000002748	LARP1B	65	90.909	ENSMNEG00000027747	-	89	90.909	Macaca_nemestrina
ENSAMEG00000002748	LARP1B	100	84.909	ENSMLEG00000009306	LARP1B	59	85.091	Mandrillus_leucophaeus
ENSAMEG00000002748	LARP1B	99	52.659	ENSMAMG00000000081	larp1b	54	53.173	Mastacembelus_armatus
ENSAMEG00000002748	LARP1B	79	54.967	ENSMZEG00005002545	larp1b	90	55.408	Maylandia_zebra
ENSAMEG00000002748	LARP1B	99	57.094	ENSMGAG00000004809	LARP1B	64	57.804	Meleagris_gallopavo
ENSAMEG00000002748	LARP1B	100	90.448	ENSMAUG00000007879	-	100	90.448	Mesocricetus_auratus
ENSAMEG00000002748	LARP1B	100	95.224	ENSMICG00000036111	LARP1B	100	95.224	Microcebus_murinus
ENSAMEG00000002748	LARP1B	97	69.632	ENSMICG00000028052	-	99	70.158	Microcebus_murinus
ENSAMEG00000002748	LARP1B	98	78.248	ENSMICG00000037883	-	90	78.248	Microcebus_murinus
ENSAMEG00000002748	LARP1B	79	94.297	ENSMOCG00000001490	Larp1b	95	94.297	Microtus_ochrogaster
ENSAMEG00000002748	LARP1B	99	52.595	ENSMALG00000003638	larp1b	53	53.541	Monopterus_albus
ENSAMEG00000002748	LARP1B	100	89.552	MGP_CAROLIEiJ_G0024962	Larp1b	100	89.552	Mus_caroli
ENSAMEG00000002748	LARP1B	100	90.746	ENSMUSG00000025762	Larp1b	100	90.746	Mus_musculus
ENSAMEG00000002748	LARP1B	100	90.149	MGP_PahariEiJ_G0026403	Larp1b	100	90.149	Mus_pahari
ENSAMEG00000002748	LARP1B	100	90.746	MGP_SPRETEiJ_G0025897	Larp1b	100	90.746	Mus_spretus
ENSAMEG00000002748	LARP1B	100	96.733	ENSMPUG00000017365	LARP1B	50	96.733	Mustela_putorius_furo
ENSAMEG00000002748	LARP1B	99	83.247	ENSMLUG00000010229	LARP1B	63	83.247	Myotis_lucifugus
ENSAMEG00000002748	LARP1B	100	91.642	ENSNLEG00000013819	LARP1B	100	91.642	Nomascus_leucogenys
ENSAMEG00000002748	LARP1B	98	75.684	ENSOPRG00000005478	LARP1B	60	70.652	Ochotona_princeps
ENSAMEG00000002748	LARP1B	100	88.358	ENSODEG00000001292	-	100	88.358	Octodon_degus
ENSAMEG00000002748	LARP1B	99	50.168	ENSONIG00000012386	larp1b	60	51.014	Oreochromis_niloticus
ENSAMEG00000002748	LARP1B	98	93.921	ENSOCUG00000013330	LARP1B	60	92.182	Oryctolagus_cuniculus
ENSAMEG00000002748	LARP1B	99	50.783	ENSORLG00000017954	larp1b	52	51.207	Oryzias_latipes
ENSAMEG00000002748	LARP1B	99	50.957	ENSORLG00020013081	larp1b	52	51.478	Oryzias_latipes_hni
ENSAMEG00000002748	LARP1B	99	52.356	ENSORLG00015009580	larp1b	52	52.257	Oryzias_latipes_hsok
ENSAMEG00000002748	LARP1B	99	51.220	ENSOMEG00000004210	larp1b	52	52.091	Oryzias_melastigma
ENSAMEG00000002748	LARP1B	100	90.942	ENSOGAG00000005771	LARP1B	63	90.942	Otolemur_garnettii
ENSAMEG00000002748	LARP1B	100	91.304	ENSOARG00000015300	LARP1B	60	91.304	Ovis_aries
ENSAMEG00000002748	LARP1B	100	91.343	ENSPPAG00000030439	LARP1B	100	91.343	Pan_paniscus
ENSAMEG00000002748	LARP1B	100	96.119	ENSPPRG00000002743	-	100	96.119	Panthera_pardus
ENSAMEG00000002748	LARP1B	100	96.119	ENSPTIG00000011225	LARP1B	100	96.119	Panthera_tigris_altaica
ENSAMEG00000002748	LARP1B	100	91.045	ENSPTRG00000016437	LARP1B	100	91.045	Pan_troglodytes
ENSAMEG00000002748	LARP1B	100	92.239	ENSPANG00000012488	LARP1B	100	92.239	Papio_anubis
ENSAMEG00000002748	LARP1B	97	46.545	ENSPKIG00000014360	larp1b	58	46.898	Paramormyrops_kingsleyae
ENSAMEG00000002748	LARP1B	99	76.757	ENSPSIG00000012885	LARP1B	59	76.937	Pelodiscus_sinensis
ENSAMEG00000002748	LARP1B	99	45.378	ENSPMAG00000002700	larp1b	61	48.235	Petromyzon_marinus
ENSAMEG00000002748	LARP1B	100	86.799	ENSPCIG00000026516	LARP1B	87	86.667	Phascolarctos_cinereus
ENSAMEG00000002748	LARP1B	99	52.239	ENSPFOG00000019519	larp1b	54	51.907	Poecilia_formosa
ENSAMEG00000002748	LARP1B	97	51.831	ENSPFOG00000022837	-	77	53.645	Poecilia_formosa
ENSAMEG00000002748	LARP1B	99	54.340	ENSPLAG00000007115	larp1b	52	54.167	Poecilia_latipinna
ENSAMEG00000002748	LARP1B	99	53.553	ENSPMEG00000001224	larp1b	52	53.380	Poecilia_mexicana
ENSAMEG00000002748	LARP1B	78	57.040	ENSPREG00000005955	-	87	56.679	Poecilia_reticulata
ENSAMEG00000002748	LARP1B	100	88.203	ENSPCAG00000007546	LARP1B	60	88.203	Procavia_capensis
ENSAMEG00000002748	LARP1B	100	94.328	ENSPCOG00000021874	LARP1B	100	94.328	Propithecus_coquereli
ENSAMEG00000002748	LARP1B	99	89.599	ENSPVAG00000005373	LARP1B	61	89.599	Pteropus_vampyrus
ENSAMEG00000002748	LARP1B	65	61.050	ENSPNYG00000017357	larp1b	51	59.091	Pundamilia_nyererei
ENSAMEG00000002748	LARP1B	98	48.136	ENSPNAG00000008823	larp1b	51	50.088	Pygocentrus_nattereri
ENSAMEG00000002748	LARP1B	100	92.239	ENSRNOG00000038366	Larp1b	100	92.239	Rattus_norvegicus
ENSAMEG00000002748	LARP1B	100	90.149	ENSRBIG00000039982	-	100	90.149	Rhinopithecus_bieti
ENSAMEG00000002748	LARP1B	100	82.985	ENSRBIG00000038568	-	92	82.985	Rhinopithecus_bieti
ENSAMEG00000002748	LARP1B	100	92.537	ENSRROG00000030771	LARP1B	100	92.537	Rhinopithecus_roxellana
ENSAMEG00000002748	LARP1B	100	73.731	ENSRROG00000038525	-	96	73.731	Rhinopithecus_roxellana
ENSAMEG00000002748	LARP1B	100	87.703	ENSSHAG00000014474	LARP1B	83	87.884	Sarcophilus_harrisii
ENSAMEG00000002748	LARP1B	99	50.508	ENSSMAG00000006347	larp1b	58	50.592	Scophthalmus_maximus
ENSAMEG00000002748	LARP1B	99	52.076	ENSSDUG00000004182	larp1b	52	52.076	Seriola_dumerili
ENSAMEG00000002748	LARP1B	98	73.716	ENSSPUG00000011837	LARP1B	74	75.432	Sphenodon_punctatus
ENSAMEG00000002748	LARP1B	98	52.870	ENSSPAG00000017772	larp1b	53	52.921	Stegastes_partitus
ENSAMEG00000002748	LARP1B	98	93.313	ENSSSCG00000034280	LARP1B	98	89.062	Sus_scrofa
ENSAMEG00000002748	LARP1B	73	58.025	ENSSSCG00000040491	-	99	73.529	Sus_scrofa
ENSAMEG00000002748	LARP1B	74	70.531	ENSTGUG00000002098	-	60	62.847	Taeniopygia_guttata
ENSAMEG00000002748	LARP1B	99	48.404	ENSTRUG00000005612	larp1b	52	50.351	Takifugu_rubripes
ENSAMEG00000002748	LARP1B	99	47.010	ENSTNIG00000012398	larp1b	61	48.161	Tetraodon_nigroviridis
ENSAMEG00000002748	LARP1B	99	84.029	ENSTTRG00000012984	LARP1B	60	84.029	Tursiops_truncatus
ENSAMEG00000002748	LARP1B	100	87.463	ENSUAMG00000016938	-	91	99.408	Ursus_americanus
ENSAMEG00000002748	LARP1B	99	97.818	ENSUMAG00000007373	LARP1B	60	97.818	Ursus_maritimus
ENSAMEG00000002748	LARP1B	99	84.182	ENSVPAG00000007223	LARP1B	60	84.182	Vicugna_pacos
ENSAMEG00000002748	LARP1B	99	97.091	ENSVVUG00000011307	LARP1B	99	97.053	Vulpes_vulpes
ENSAMEG00000002748	LARP1B	98	56.204	ENSXETG00000022512	larp1b	53	56.204	Xenopus_tropicalis
ENSAMEG00000002748	LARP1B	99	53.082	ENSXMAG00000008150	larp1b	52	53.082	Xiphophorus_maculatus