EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000002963 (Gene tree)
Gene ID: 100476286
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 7941 bases
Position: chrGL192401.1:725829-733769
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000003112	R3H	PF01424.22	9.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000003240	R3HCC1-201	1440	-	ENSAMEP00000003112	479 (aa)	-	G1L896

Gene Model

Click here to download ENSAMEG00000002963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000002963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000002963	R3HCC1	99	76.842	ENSG00000104679	R3HCC1	100	100.000	Homo_sapiens
ENSAMEG00000002963	R3HCC1	60	44.737	ENSAPOG00000003616	r3hcc1	91	32.407	Acanthochromis_polyacanthus
ENSAMEG00000002963	R3HCC1	88	33.043	ENSACIG00000017144	r3hcc1	98	30.454	Amphilophus_citrinellus
ENSAMEG00000002963	R3HCC1	57	46.154	ENSAOCG00000003945	r3hcc1	68	45.333	Amphiprion_ocellaris
ENSAMEG00000002963	R3HCC1	57	46.154	ENSAPEG00000003613	r3hcc1	68	44.667	Amphiprion_percula
ENSAMEG00000002963	R3HCC1	56	43.151	ENSATEG00000023860	r3hcc1	99	31.250	Anabas_testudineus
ENSAMEG00000002963	R3HCC1	89	46.833	ENSACAG00000016627	R3HCC1	96	48.315	Anolis_carolinensis
ENSAMEG00000002963	R3HCC1	92	79.955	ENSANAG00000036169	R3HCC1	95	80.317	Aotus_nancymaae
ENSAMEG00000002963	R3HCC1	93	77.951	ENSBTAG00000025830	R3HCC1	98	78.125	Bos_taurus
ENSAMEG00000002963	R3HCC1	92	79.864	ENSCJAG00000020118	R3HCC1	99	71.396	Callithrix_jacchus
ENSAMEG00000002963	R3HCC1	93	89.013	ENSCAFG00000009210	R3HCC1	97	88.989	Canis_familiaris
ENSAMEG00000002963	R3HCC1	81	85.233	ENSCAFG00020012870	R3HCC1	90	85.233	Canis_lupus_dingo
ENSAMEG00000002963	R3HCC1	92	72.707	ENSCHIG00000009107	R3HCC1	100	72.926	Capra_hircus
ENSAMEG00000002963	R3HCC1	99	76.520	ENSTSYG00000000511	R3HCC1	84	76.520	Carlito_syrichta
ENSAMEG00000002963	R3HCC1	82	57.870	ENSCAPG00000015813	R3HCC1	100	57.639	Cavia_aperea
ENSAMEG00000002963	R3HCC1	91	65.116	ENSCPOG00000009696	R3HCC1	100	64.905	Cavia_porcellus
ENSAMEG00000002963	R3HCC1	99	77.101	ENSCCAG00000037811	R3HCC1	99	77.474	Cebus_capucinus
ENSAMEG00000002963	R3HCC1	99	76.471	ENSCATG00000032971	R3HCC1	99	71.625	Cercocebus_atys
ENSAMEG00000002963	R3HCC1	93	72.584	ENSCLAG00000015556	R3HCC1	92	70.894	Chinchilla_lanigera
ENSAMEG00000002963	R3HCC1	99	77.101	ENSCSAG00000016250	R3HCC1	99	76.842	Chlorocebus_sabaeus
ENSAMEG00000002963	R3HCC1	91	76.364	ENSCHOG00000000396	R3HCC1	96	77.045	Choloepus_hoffmanni
ENSAMEG00000002963	R3HCC1	99	76.618	ENSCANG00000029441	R3HCC1	92	80.090	Colobus_angolensis_palliatus
ENSAMEG00000002963	R3HCC1	90	62.474	ENSCGRG00001014977	R3hcc1	99	62.526	Cricetulus_griseus_chok1gshd
ENSAMEG00000002963	R3HCC1	90	62.474	ENSCGRG00000004454	R3hcc1	99	62.526	Cricetulus_griseus_crigri
ENSAMEG00000002963	R3HCC1	87	33.716	ENSCSEG00000005748	r3hcc1	98	32.798	Cynoglossus_semilaevis
ENSAMEG00000002963	R3HCC1	75	31.662	ENSCVAG00000002640	r3hcc1	95	30.871	Cyprinodon_variegatus
ENSAMEG00000002963	R3HCC1	90	32.715	ENSDARG00000099593	r3hcc1	98	34.279	Danio_rerio
ENSAMEG00000002963	R3HCC1	98	76.383	ENSDNOG00000007168	R3HCC1	98	75.957	Dasypus_novemcinctus
ENSAMEG00000002963	R3HCC1	90	63.825	ENSDORG00000026365	R3hcc1	99	58.714	Dipodomys_ordii
ENSAMEG00000002963	R3HCC1	95	67.834	ENSETEG00000001147	R3HCC1	97	68.864	Echinops_telfairi
ENSAMEG00000002963	R3HCC1	92	85.586	ENSEASG00005018782	R3HCC1	81	85.360	Equus_asinus_asinus
ENSAMEG00000002963	R3HCC1	92	84.009	ENSECAG00000025013	R3HCC1	98	84.234	Equus_caballus
ENSAMEG00000002963	R3HCC1	94	75.724	ENSEEUG00000011918	R3HCC1	96	76.765	Erinaceus_europaeus
ENSAMEG00000002963	R3HCC1	85	35.402	ENSELUG00000023650	r3hcc1	77	43.220	Esox_lucius
ENSAMEG00000002963	R3HCC1	97	90.713	ENSFCAG00000012395	R3HCC1	98	91.910	Felis_catus
ENSAMEG00000002963	R3HCC1	90	66.885	ENSFDAG00000001572	R3HCC1	98	66.885	Fukomys_damarensis
ENSAMEG00000002963	R3HCC1	89	36.036	ENSGAFG00000008747	-	91	35.570	Gambusia_affinis
ENSAMEG00000002963	R3HCC1	92	34.513	ENSGACG00000008447	r3hcc1	96	34.325	Gasterosteus_aculeatus
ENSAMEG00000002963	R3HCC1	99	77.637	ENSGGOG00000013817	R3HCC1	99	80.230	Gorilla_gorilla
ENSAMEG00000002963	R3HCC1	96	69.165	ENSHGLG00000010517	R3HCC1	94	69.807	Heterocephalus_glaber_female
ENSAMEG00000002963	R3HCC1	96	69.165	ENSHGLG00100006388	R3HCC1	94	69.807	Heterocephalus_glaber_male
ENSAMEG00000002963	R3HCC1	65	43.636	ENSHCOG00000011745	r3hcc1	94	33.949	Hippocampus_comes
ENSAMEG00000002963	R3HCC1	89	36.242	ENSIPUG00000024504	r3hcc1	87	36.795	Ictalurus_punctatus
ENSAMEG00000002963	R3HCC1	91	68.243	ENSSTOG00000027130	R3HCC1	96	68.233	Ictidomys_tridecemlineatus
ENSAMEG00000002963	R3HCC1	90	66.885	ENSJJAG00000013075	R3hcc1	99	66.885	Jaculus_jaculus
ENSAMEG00000002963	R3HCC1	84	32.452	ENSKMAG00000000286	r3hcc1	98	32.683	Kryptolebias_marmoratus
ENSAMEG00000002963	R3HCC1	89	41.189	ENSLACG00000011894	R3HCC1	97	41.020	Latimeria_chalumnae
ENSAMEG00000002963	R3HCC1	89	34.382	ENSLOCG00000015442	r3hcc1	99	34.532	Lepisosteus_oculatus
ENSAMEG00000002963	R3HCC1	95	71.600	ENSLAFG00000016137	R3HCC1	99	70.942	Loxodonta_africana
ENSAMEG00000002963	R3HCC1	99	76.050	ENSMFAG00000032894	R3HCC1	99	71.396	Macaca_fascicularis
ENSAMEG00000002963	R3HCC1	99	75.726	ENSMMUG00000016655	R3HCC1	99	75.676	Macaca_mulatta
ENSAMEG00000002963	R3HCC1	99	76.261	ENSMNEG00000043283	R3HCC1	99	71.396	Macaca_nemestrina
ENSAMEG00000002963	R3HCC1	99	77.101	ENSMLEG00000030147	R3HCC1	99	76.632	Mandrillus_leucophaeus
ENSAMEG00000002963	R3HCC1	58	45.161	ENSMAMG00000018146	r3hcc1	98	31.991	Mastacembelus_armatus
ENSAMEG00000002963	R3HCC1	90	45.843	ENSMGAG00000001356	R3HCC1	90	46.032	Meleagris_gallopavo
ENSAMEG00000002963	R3HCC1	51	69.672	ENSMAUG00000016096	R3hcc1	99	63.889	Mesocricetus_auratus
ENSAMEG00000002963	R3HCC1	93	78.125	ENSMICG00000011146	R3HCC1	94	79.773	Microcebus_murinus
ENSAMEG00000002963	R3HCC1	91	61.554	ENSMOCG00000018508	R3hcc1	99	61.350	Microtus_ochrogaster
ENSAMEG00000002963	R3HCC1	90	49.556	ENSMODG00000016809	-	100	49.778	Monodelphis_domestica
ENSAMEG00000002963	R3HCC1	84	30.549	ENSMALG00000000731	r3hcc1	98	30.969	Monopterus_albus
ENSAMEG00000002963	R3HCC1	92	62.626	MGP_CAROLIEiJ_G0019467	R3hcc1	99	63.434	Mus_caroli
ENSAMEG00000002963	R3HCC1	92	62.626	ENSMUSG00000034194	R3hcc1	99	63.232	Mus_musculus
ENSAMEG00000002963	R3HCC1	92	62.374	MGP_SPRETEiJ_G0020359	R3hcc1	99	62.978	Mus_spretus
ENSAMEG00000002963	R3HCC1	98	92.324	ENSMPUG00000003457	R3HCC1	93	92.324	Mustela_putorius_furo
ENSAMEG00000002963	R3HCC1	98	78.344	ENSMLUG00000000266	R3HCC1	98	78.769	Myotis_lucifugus
ENSAMEG00000002963	R3HCC1	91	70.175	ENSNGAG00000016747	R3hcc1	99	69.079	Nannospalax_galili
ENSAMEG00000002963	R3HCC1	91	73.636	ENSNLEG00000015944	R3HCC1	92	73.756	Nomascus_leucogenys
ENSAMEG00000002963	R3HCC1	91	56.195	ENSMEUG00000010587	R3HCC1	99	56.659	Notamacropus_eugenii
ENSAMEG00000002963	R3HCC1	95	68.352	ENSOPRG00000013390	R3HCC1	95	68.864	Ochotona_princeps
ENSAMEG00000002963	R3HCC1	90	66.237	ENSODEG00000007529	R3HCC1	99	66.878	Octodon_degus
ENSAMEG00000002963	R3HCC1	91	59.152	ENSOANG00000013877	R3HCC1	97	60.579	Ornithorhynchus_anatinus
ENSAMEG00000002963	R3HCC1	96	67.462	ENSOCUG00000023554	R3HCC1	90	67.462	Oryctolagus_cuniculus
ENSAMEG00000002963	R3HCC1	83	32.759	ENSORLG00000016816	r3hcc1	97	33.575	Oryzias_latipes
ENSAMEG00000002963	R3HCC1	83	33.092	ENSORLG00020012005	r3hcc1	97	33.571	Oryzias_latipes_hni
ENSAMEG00000002963	R3HCC1	85	32.692	ENSOMEG00000000816	r3hcc1	99	32.381	Oryzias_melastigma
ENSAMEG00000002963	R3HCC1	97	72.805	ENSOGAG00000001291	R3HCC1	98	72.805	Otolemur_garnettii
ENSAMEG00000002963	R3HCC1	100	75.934	ENSOARG00000010146	R3HCC1	100	76.141	Ovis_aries
ENSAMEG00000002963	R3HCC1	99	76.842	ENSPPAG00000033165	R3HCC1	99	79.634	Pan_paniscus
ENSAMEG00000002963	R3HCC1	90	92.130	ENSPPRG00000002522	R3HCC1	99	92.361	Panthera_pardus
ENSAMEG00000002963	R3HCC1	83	91.940	ENSPTIG00000011230	R3HCC1	95	91.709	Panthera_tigris_altaica
ENSAMEG00000002963	R3HCC1	98	77.754	ENSPTRG00000020076	R3HCC1	98	77.966	Pan_troglodytes
ENSAMEG00000002963	R3HCC1	99	76.891	ENSPANG00000000453	R3HCC1	99	76.842	Papio_anubis
ENSAMEG00000002963	R3HCC1	82	36.272	ENSPKIG00000014426	-	95	35.969	Paramormyrops_kingsleyae
ENSAMEG00000002963	R3HCC1	82	36.181	ENSPKIG00000020397	-	95	35.787	Paramormyrops_kingsleyae
ENSAMEG00000002963	R3HCC1	90	48.035	ENSPSIG00000017664	R3HCC1	98	47.380	Pelodiscus_sinensis
ENSAMEG00000002963	R3HCC1	91	63.466	ENSPEMG00000007118	R3hcc1	99	63.674	Peromyscus_maniculatus_bairdii
ENSAMEG00000002963	R3HCC1	84	50.234	ENSPCIG00000022718	-	85	50.962	Phascolarctos_cinereus
ENSAMEG00000002963	R3HCC1	89	34.375	ENSPFOG00000022301	r3hcc1	91	34.529	Poecilia_formosa
ENSAMEG00000002963	R3HCC1	89	35.780	ENSPLAG00000010794	r3hcc1	91	35.586	Poecilia_latipinna
ENSAMEG00000002963	R3HCC1	89	34.375	ENSPMEG00000022515	r3hcc1	91	34.529	Poecilia_mexicana
ENSAMEG00000002963	R3HCC1	89	35.730	ENSPREG00000000713	r3hcc1	91	36.404	Poecilia_reticulata
ENSAMEG00000002963	R3HCC1	84	78.908	ENSPPYG00000018436	R3HCC1	99	79.156	Pongo_abelii
ENSAMEG00000002963	R3HCC1	72	83.553	ENSPCAG00000012229	R3HCC1	73	83.553	Procavia_capensis
ENSAMEG00000002963	R3HCC1	91	78.621	ENSPCOG00000027554	R3HCC1	99	79.540	Propithecus_coquereli
ENSAMEG00000002963	R3HCC1	95	77.729	ENSPVAG00000009829	R3HCC1	96	78.781	Pteropus_vampyrus
ENSAMEG00000002963	R3HCC1	59	45.775	ENSPNAG00000023875	r3hcc1	74	45.775	Pygocentrus_nattereri
ENSAMEG00000002963	R3HCC1	98	62.835	ENSRNOG00000016777	AABR07018321.1	87	61.877	Rattus_norvegicus
ENSAMEG00000002963	R3HCC1	91	79.863	ENSRBIG00000028045	R3HCC1	99	80.092	Rhinopithecus_bieti
ENSAMEG00000002963	R3HCC1	95	78.993	ENSRROG00000031126	R3HCC1	99	72.082	Rhinopithecus_roxellana
ENSAMEG00000002963	R3HCC1	90	79.080	ENSSBOG00000022590	R3HCC1	99	79.310	Saimiri_boliviensis_boliviensis
ENSAMEG00000002963	R3HCC1	91	51.225	ENSSHAG00000016526	-	99	51.225	Sarcophilus_harrisii
ENSAMEG00000002963	R3HCC1	83	36.432	ENSSFOG00015013507	r3hcc1	98	35.678	Scleropages_formosus
ENSAMEG00000002963	R3HCC1	84	32.220	ENSSMAG00000008647	r3hcc1	98	31.981	Scophthalmus_maximus
ENSAMEG00000002963	R3HCC1	64	46.853	ENSSDUG00000022786	r3hcc1	97	33.482	Seriola_dumerili
ENSAMEG00000002963	R3HCC1	64	46.853	ENSSLDG00000019031	r3hcc1	97	34.014	Seriola_lalandi_dorsalis
ENSAMEG00000002963	R3HCC1	65	82.517	ENSSARG00000013514	-	70	83.571	Sorex_araneus
ENSAMEG00000002963	R3HCC1	85	31.982	ENSSPAG00000013497	r3hcc1	68	47.333	Stegastes_partitus
ENSAMEG00000002963	R3HCC1	98	80.550	ENSSSCG00000039915	-	99	80.761	Sus_scrofa
ENSAMEG00000002963	R3HCC1	92	73.138	ENSSSCG00000037347	-	89	74.424	Sus_scrofa
ENSAMEG00000002963	R3HCC1	87	32.783	ENSTRUG00000015880	r3hcc1	98	32.311	Takifugu_rubripes
ENSAMEG00000002963	R3HCC1	94	74.336	ENSTTRG00000012247	R3HCC1	99	74.336	Tursiops_truncatus
ENSAMEG00000002963	R3HCC1	92	95.455	ENSUAMG00000007344	R3HCC1	100	95.455	Ursus_americanus
ENSAMEG00000002963	R3HCC1	95	88.521	ENSVVUG00000005056	R3HCC1	97	89.438	Vulpes_vulpes
ENSAMEG00000002963	R3HCC1	85	35.577	ENSXCOG00000017626	r3hcc1	88	35.529	Xiphophorus_couchianus
ENSAMEG00000002963	R3HCC1	89	35.308	ENSXMAG00000018375	r3hcc1	91	35.468	Xiphophorus_maculatus