EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000003025 (Gene tree)
Gene ID: 100480350
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 13026 bases
Position: chrGL192808.1:1363269-1376294
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000003191	ResIII	PF04851.15	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000003322	-	4092	-	ENSAMEP00000003191	1364 (aa)	-	G1L8H4

Gene Model

Click here to download ENSAMEG00000003025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000003025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000003025	-	94	72.769	ENSAMEG00000014179	-	68	71.684
ENSAMEG00000003025	-	97	69.258	ENSAMEG00000009880	CHD5	70	69.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000003025	-	100	97.434	ENSG00000170004	CHD3	68	100.000	Homo_sapiens
ENSAMEG00000003025	-	81	87.582	ENSAPOG00000005614	chd3	67	87.582	Acanthochromis_polyacanthus
ENSAMEG00000003025	-	82	84.890	ENSACIG00000019671	chd3	71	84.890	Amphilophus_citrinellus
ENSAMEG00000003025	-	81	87.473	ENSAOCG00000023784	chd3	69	87.473	Amphiprion_ocellaris
ENSAMEG00000003025	-	68	86.247	ENSAPEG00000006341	chd3	68	76.275	Amphiprion_percula
ENSAMEG00000003025	-	100	75.723	ENSATEG00000000848	chd3	68	82.015	Anabas_testudineus
ENSAMEG00000003025	-	100	86.109	ENSACAG00000004276	CHD3	66	86.109	Anolis_carolinensis
ENSAMEG00000003025	-	100	97.361	ENSANAG00000034323	CHD3	72	97.361	Aotus_nancymaae
ENSAMEG00000003025	-	91	84.216	ENSACLG00000009222	chd3	70	75.842	Astatotilapia_calliptera
ENSAMEG00000003025	-	100	97.143	ENSBTAG00000014377	CHD3	67	97.134	Bos_taurus
ENSAMEG00000003025	-	100	97.214	ENSCJAG00000014766	CHD3	68	97.214	Callithrix_jacchus
ENSAMEG00000003025	-	100	97.581	ENSCAFG00000016859	CHD3	68	97.581	Canis_familiaris
ENSAMEG00000003025	-	100	97.581	ENSCAFG00020007422	CHD3	74	97.581	Canis_lupus_dingo
ENSAMEG00000003025	-	100	97.434	ENSCHIG00000016737	CHD3	69	97.434	Capra_hircus
ENSAMEG00000003025	-	100	97.141	ENSTSYG00000035658	CHD3	74	93.791	Carlito_syrichta
ENSAMEG00000003025	-	100	93.182	ENSCAPG00000014864	CHD3	67	93.182	Cavia_aperea
ENSAMEG00000003025	-	100	96.848	ENSCPOG00000022653	CHD3	68	96.848	Cavia_porcellus
ENSAMEG00000003025	-	100	97.067	ENSCCAG00000034792	CHD3	68	97.067	Cebus_capucinus
ENSAMEG00000003025	-	100	97.214	ENSCATG00000041717	CHD3	68	97.214	Cercocebus_atys
ENSAMEG00000003025	-	100	97.067	ENSCLAG00000010523	CHD3	69	97.067	Chinchilla_lanigera
ENSAMEG00000003025	-	100	97.287	ENSCSAG00000011122	CHD3	69	97.287	Chlorocebus_sabaeus
ENSAMEG00000003025	-	90	87.409	ENSCPBG00000011966	CHD3	72	87.581	Chrysemys_picta_bellii
ENSAMEG00000003025	-	100	97.141	ENSCANG00000037641	CHD3	74	93.223	Colobus_angolensis_palliatus
ENSAMEG00000003025	-	100	96.408	ENSCGRG00001011306	Chd3	69	96.408	Cricetulus_griseus_chok1gshd
ENSAMEG00000003025	-	100	89.370	ENSCGRG00000007878	Chd3	72	89.003	Cricetulus_griseus_crigri
ENSAMEG00000003025	-	95	76.085	ENSCSEG00000004489	chd3	70	82.604	Cynoglossus_semilaevis
ENSAMEG00000003025	-	85	85.016	ENSCVAG00000007293	chd3	65	85.016	Cyprinodon_variegatus
ENSAMEG00000003025	-	100	77.615	ENSDARG00000021405	chd3	76	77.762	Danio_rerio
ENSAMEG00000003025	-	92	93.312	ENSDNOG00000047846	CHD3	63	93.312	Dasypus_novemcinctus
ENSAMEG00000003025	-	100	96.188	ENSDORG00000010713	Chd3	69	96.188	Dipodomys_ordii
ENSAMEG00000003025	-	97	93.580	ENSETEG00000017733	CHD3	69	93.580	Echinops_telfairi
ENSAMEG00000003025	-	68	80.806	ENSEBUG00000008310	chd3	90	70.268	Eptatretus_burgeri
ENSAMEG00000003025	-	100	97.141	ENSEASG00005019360	CHD3	74	97.141	Equus_asinus_asinus
ENSAMEG00000003025	-	100	97.214	ENSECAG00000010051	CHD3	74	97.214	Equus_caballus
ENSAMEG00000003025	-	89	98.305	ENSEEUG00000015205	CHD3	62	100.000	Erinaceus_europaeus
ENSAMEG00000003025	-	78	83.636	ENSELUG00000019499	chd3	69	83.636	Esox_lucius
ENSAMEG00000003025	-	100	96.994	ENSFCAG00000009629	CHD3	66	96.994	Felis_catus
ENSAMEG00000003025	-	100	97.141	ENSFDAG00000008220	CHD3	69	97.141	Fukomys_damarensis
ENSAMEG00000003025	-	91	81.701	ENSGMOG00000013599	chd3	66	82.131	Gadus_morhua
ENSAMEG00000003025	-	100	76.073	ENSGACG00000019275	chd3	71	76.291	Gasterosteus_aculeatus
ENSAMEG00000003025	-	82	88.104	ENSGAGG00000013164	CHD3	69	95.341	Gopherus_agassizii
ENSAMEG00000003025	-	100	97.434	ENSGGOG00000013496	CHD3	74	93.439	Gorilla_gorilla
ENSAMEG00000003025	-	100	97.214	ENSHGLG00000012017	CHD3	69	97.214	Heterocephalus_glaber_female
ENSAMEG00000003025	-	86	89.377	ENSHGLG00100013902	CHD3	66	89.377	Heterocephalus_glaber_male
ENSAMEG00000003025	-	95	76.361	ENSHCOG00000010170	chd3	66	76.435	Hippocampus_comes
ENSAMEG00000003025	-	89	85.479	ENSIPUG00000003271	chd3	71	86.340	Ictalurus_punctatus
ENSAMEG00000003025	-	100	96.994	ENSSTOG00000025907	CHD3	69	96.994	Ictidomys_tridecemlineatus
ENSAMEG00000003025	-	100	96.114	ENSJJAG00000017633	Chd3	69	96.114	Jaculus_jaculus
ENSAMEG00000003025	-	92	83.658	ENSKMAG00000019292	chd3	69	75.678	Kryptolebias_marmoratus
ENSAMEG00000003025	-	98	71.226	ENSLBEG00000028485	chd3	63	73.122	Labrus_bergylta
ENSAMEG00000003025	-	97	74.372	ENSLACG00000008031	CHD3	68	74.893	Latimeria_chalumnae
ENSAMEG00000003025	-	100	78.566	ENSLOCG00000013965	chd3	69	78.496	Lepisosteus_oculatus
ENSAMEG00000003025	-	94	96.958	ENSLAFG00000000572	CHD3	68	96.958	Loxodonta_africana
ENSAMEG00000003025	-	100	97.214	ENSMFAG00000020113	CHD3	74	94.868	Macaca_fascicularis
ENSAMEG00000003025	-	100	93.768	ENSMMUG00000022221	CHD3	68	92.847	Macaca_mulatta
ENSAMEG00000003025	-	100	97.141	ENSMNEG00000001728	CHD3	74	96.408	Macaca_nemestrina
ENSAMEG00000003025	-	100	97.214	ENSMLEG00000032249	CHD3	68	97.214	Mandrillus_leucophaeus
ENSAMEG00000003025	-	90	75.381	ENSMAMG00000000564	chd3	67	86.270	Mastacembelus_armatus
ENSAMEG00000003025	-	100	96.188	ENSMAUG00000013873	Chd3	74	93.119	Mesocricetus_auratus
ENSAMEG00000003025	-	100	97.287	ENSMICG00000008741	CHD3	70	97.216	Microcebus_murinus
ENSAMEG00000003025	-	100	96.334	ENSMOCG00000004848	Chd3	69	96.334	Microtus_ochrogaster
ENSAMEG00000003025	-	97	77.242	ENSMMOG00000012699	chd3	71	77.769	Mola_mola
ENSAMEG00000003025	-	100	91.429	ENSMODG00000007509	CHD3	74	91.355	Monodelphis_domestica
ENSAMEG00000003025	-	100	95.974	MGP_CAROLIEiJ_G0016564	Chd3	66	95.974	Mus_caroli
ENSAMEG00000003025	-	100	96.193	ENSMUSG00000018474	Chd3	66	96.193	Mus_musculus
ENSAMEG00000003025	-	100	96.266	MGP_PahariEiJ_G0017695	Chd3	67	96.266	Mus_pahari
ENSAMEG00000003025	-	100	96.047	MGP_SPRETEiJ_G0017400	Chd3	66	96.047	Mus_spretus
ENSAMEG00000003025	-	100	97.729	ENSMPUG00000008861	CHD3	80	97.729	Mustela_putorius_furo
ENSAMEG00000003025	-	100	96.923	ENSMLUG00000014643	-	68	96.923	Myotis_lucifugus
ENSAMEG00000003025	-	100	96.261	ENSNGAG00000000773	Chd3	68	96.261	Nannospalax_galili
ENSAMEG00000003025	-	91	76.709	ENSNBRG00000000636	chd3	72	77.626	Neolamprologus_brichardi
ENSAMEG00000003025	-	99	92.012	ENSNLEG00000009770	CHD3	68	92.749	Nomascus_leucogenys
ENSAMEG00000003025	-	82	86.395	ENSMEUG00000005852	CHD3	58	86.395	Notamacropus_eugenii
ENSAMEG00000003025	-	100	94.868	ENSOPRG00000011069	CHD3	73	94.868	Ochotona_princeps
ENSAMEG00000003025	-	100	96.848	ENSODEG00000017785	CHD3	69	96.848	Octodon_degus
ENSAMEG00000003025	-	68	86.437	ENSONIG00000009292	chd3	69	77.935	Oreochromis_niloticus
ENSAMEG00000003025	-	100	93.713	ENSOCUG00000029299	CHD3	71	94.083	Oryctolagus_cuniculus
ENSAMEG00000003025	-	79	75.184	ENSORLG00000007107	chd3	61	75.253	Oryzias_latipes
ENSAMEG00000003025	-	68	87.351	ENSOMEG00000013691	chd3	72	78.854	Oryzias_melastigma
ENSAMEG00000003025	-	100	97.141	ENSOGAG00000003216	CHD3	69	97.141	Otolemur_garnettii
ENSAMEG00000003025	-	100	96.562	ENSOARG00000017855	CHD3	70	96.562	Ovis_aries
ENSAMEG00000003025	-	100	94.616	ENSPPAG00000032886	CHD3	74	93.037	Pan_paniscus
ENSAMEG00000003025	-	100	97.287	ENSPPRG00000000626	CHD3	68	97.287	Panthera_pardus
ENSAMEG00000003025	-	100	97.507	ENSPTRG00000008714	CHD3	74	93.583	Pan_troglodytes
ENSAMEG00000003025	-	100	97.214	ENSPANG00000023938	CHD3	74	94.868	Papio_anubis
ENSAMEG00000003025	-	100	77.367	ENSPKIG00000006305	chd3	70	77.151	Paramormyrops_kingsleyae
ENSAMEG00000003025	-	53	96.399	ENSPSIG00000010177	CHD3	65	96.399	Pelodiscus_sinensis
ENSAMEG00000003025	-	100	96.114	ENSPEMG00000014262	Chd3	69	96.114	Peromyscus_maniculatus_bairdii
ENSAMEG00000003025	-	100	91.722	ENSPCIG00000005442	CHD3	67	98.370	Phascolarctos_cinereus
ENSAMEG00000003025	-	97	75.036	ENSPFOG00000012464	chd3	64	76.398	Poecilia_formosa
ENSAMEG00000003025	-	85	81.270	ENSPLAG00000002887	chd3	64	82.030	Poecilia_latipinna
ENSAMEG00000003025	-	89	87.027	ENSPREG00000011044	chd3	69	85.120	Poecilia_reticulata
ENSAMEG00000003025	-	100	95.601	ENSPPYG00000007940	CHD3	70	95.601	Pongo_abelii
ENSAMEG00000003025	-	99	96.552	ENSPCAG00000004350	CHD3	69	96.552	Procavia_capensis
ENSAMEG00000003025	-	100	97.141	ENSPCOG00000020952	CHD3	68	97.070	Propithecus_coquereli
ENSAMEG00000003025	-	81	99.775	ENSPVAG00000016344	CHD3	56	99.775	Pteropus_vampyrus
ENSAMEG00000003025	-	94	86.047	ENSPNAG00000020393	chd3	71	86.047	Pygocentrus_nattereri
ENSAMEG00000003025	-	100	96.047	ENSRNOG00000009722	Chd3	74	96.047	Rattus_norvegicus
ENSAMEG00000003025	-	100	94.953	ENSRBIG00000033562	CHD3	75	94.953	Rhinopithecus_bieti
ENSAMEG00000003025	-	100	94.881	ENSRROG00000029554	CHD3	75	94.329	Rhinopithecus_roxellana
ENSAMEG00000003025	-	100	97.361	ENSSBOG00000020719	CHD3	74	96.554	Saimiri_boliviensis_boliviensis
ENSAMEG00000003025	-	100	91.502	ENSSHAG00000014412	CHD3	69	91.429	Sarcophilus_harrisii
ENSAMEG00000003025	-	97	78.738	ENSSFOG00015023123	chd3	76	78.754	Scleropages_formosus
ENSAMEG00000003025	-	100	75.053	ENSSMAG00000006451	chd3	67	85.948	Scophthalmus_maximus
ENSAMEG00000003025	-	80	85.185	ENSSPAG00000013694	chd3	69	85.185	Stegastes_partitus
ENSAMEG00000003025	-	100	97.070	ENSSSCG00000021363	CHD3	74	97.070	Sus_scrofa
ENSAMEG00000003025	-	67	84.607	ENSTRUG00000014990	chd3	60	80.241	Takifugu_rubripes
ENSAMEG00000003025	-	100	75.988	ENSTNIG00000012998	chd3	69	76.356	Tetraodon_nigroviridis
ENSAMEG00000003025	-	100	97.507	ENSTTRG00000010295	CHD3	69	97.507	Tursiops_truncatus
ENSAMEG00000003025	-	100	97.074	ENSUAMG00000005475	CHD3	74	97.074	Ursus_americanus
ENSAMEG00000003025	-	100	97.581	ENSVVUG00000028011	CHD3	72	97.581	Vulpes_vulpes
ENSAMEG00000003025	-	100	74.766	ENSXETG00000012991	chd3	68	74.623	Xenopus_tropicalis
ENSAMEG00000003025	-	80	86.150	ENSXMAG00000016035	chd3	70	86.710	Xiphophorus_maculatus