EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMEG00000003050 (Gene tree)
Gene ID
100481358
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Ailuropoda_melanoleuca
Status
putative
Strand
Minus strand
Length
132780 bases
Position
chrGL192995.1:519989-652768
Accession
9349
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMEP00000003221zf-C2H2PF00096.261.4e-5418
ENSAMEP00000003221zf-C2H2PF00096.261.4e-5428
ENSAMEP00000003221zf-C2H2PF00096.261.4e-5438
ENSAMEP00000003221zf-C2H2PF00096.261.4e-5448
ENSAMEP00000003221zf-C2H2PF00096.261.4e-5458
ENSAMEP00000003221zf-C2H2PF00096.261.4e-5468
ENSAMEP00000003221zf-C2H2PF00096.261.4e-5478
ENSAMEP00000003221zf-C2H2PF00096.261.4e-5488
ENSAMEP00000003221zf-metPF12874.71.5e-2013
ENSAMEP00000003221zf-metPF12874.71.5e-2023
ENSAMEP00000003221zf-metPF12874.71.5e-2033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMET00000003352PRDM5-2011719-ENSAMEP00000003221572 (aa)-G1L8K2
Gene Model
Click here to download ENSAMEG00000003050's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000003050's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMEG00000003050PRDM56233.083ENSAMEG00000005557CPSF18032.353
ENSAMEG00000003050PRDM58139.352ENSAMEG00000001261ZFP16639.352
ENSAMEG00000003050PRDM58145.946ENSAMEG00000016234PRDM125845.946
ENSAMEG00000003050PRDM59038.000ENSAMEG00000007611-10036.749
ENSAMEG00000003050PRDM58235.294ENSAMEG00000012925ZNF1127233.333
ENSAMEG00000003050PRDM58731.950ENSAMEG00000015824GTF3A8430.738
ENSAMEG00000003050PRDM58141.071ENSAMEG00000010549ZNF2366041.071
ENSAMEG00000003050PRDM58430.729ENSAMEG00000014151ZNF5219430.729
ENSAMEG00000003050PRDM58031.302ENSAMEG00000017202ZNF3198831.302
ENSAMEG00000003050PRDM58233.154ENSAMEG00000012006-8432.338
ENSAMEG00000003050PRDM58637.288ENSAMEG00000009560ZNF5826937.288
ENSAMEG00000003050PRDM59833.607ENSAMEG00000000176ZNF5999231.818
ENSAMEG00000003050PRDM58134.076ENSAMEG00000012930ZNF2356635.638
ENSAMEG00000003050PRDM58433.610ENSAMEG00000014454-9935.440
ENSAMEG00000003050PRDM57835.075ENSAMEG00000009606SNAI26435.075
ENSAMEG00000003050PRDM58232.564ENSAMEG00000003482ZNF6285730.458
ENSAMEG00000003050PRDM58733.432ENSAMEG00000007308ZNF6689233.432
ENSAMEG00000003050PRDM57830.919ENSAMEG00000006122ZNF2336735.874
ENSAMEG00000003050PRDM58333.155ENSAMEG00000008136ZNF3178333.645
ENSAMEG00000003050PRDM58030.000ENSAMEG00000007292ZNF6469930.380
ENSAMEG00000003050PRDM58236.782ENSAMEG00000002368-7936.782
ENSAMEG00000003050PRDM58036.025ENSAMEG00000013858-9036.025
ENSAMEG00000003050PRDM58434.211ENSAMEG00000006481ZNF4238934.211
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMEG00000003050PRDM510091.840ENSG00000138738PRDM59688.550Homo_sapiens
ENSAMEG00000003050PRDM510072.251ENSAPOG00000023220prdm59172.426Acanthochromis_polyacanthus
ENSAMEG00000003050PRDM59872.518ENSACIG00000000406prdm59172.695Amphilophus_citrinellus
ENSAMEG00000003050PRDM510072.775ENSAOCG00000014806prdm59172.775Amphiprion_ocellaris
ENSAMEG00000003050PRDM510068.013ENSAPEG00000016846prdm59068.013Amphiprion_percula
ENSAMEG00000003050PRDM510073.657ENSATEG00000013829prdm59173.702Anabas_testudineus
ENSAMEG00000003050PRDM510080.138ENSAPLG00000013828PRDM59679.138Anas_platyrhynchos
ENSAMEG00000003050PRDM510073.958ENSACAG00000012999PRDM59173.137Anolis_carolinensis
ENSAMEG00000003050PRDM510091.509ENSANAG00000027411PRDM59190.625Aotus_nancymaae
ENSAMEG00000003050PRDM510072.600ENSACLG00000017996prdm59072.600Astatotilapia_calliptera
ENSAMEG00000003050PRDM59372.542ENSAMXG00000041864prdm59973.284Astyanax_mexicanus
ENSAMEG00000003050PRDM510092.014ENSBTAG00000012111PRDM59191.667Bos_taurus
ENSAMEG00000003050PRDM510091.509ENSCJAG00000003133PRDM59190.799Callithrix_jacchus
ENSAMEG00000003050PRDM510085.069ENSCAFG00000004179PRDM59984.896Canis_familiaris
ENSAMEG00000003050PRDM510093.403ENSCAFG00020017685PRDM59193.229Canis_lupus_dingo
ENSAMEG00000003050PRDM510089.236ENSCHIG00000018772PRDM59189.062Capra_hircus
ENSAMEG00000003050PRDM59992.534ENSTSYG00000009630PRDM59092.338Carlito_syrichta
ENSAMEG00000003050PRDM510085.340ENSCAPG00000015217PRDM510082.895Cavia_aperea
ENSAMEG00000003050PRDM510091.195ENSCPOG00000012883PRDM59391.195Cavia_porcellus
ENSAMEG00000003050PRDM510091.824ENSCCAG00000023157PRDM59190.625Cebus_capucinus
ENSAMEG00000003050PRDM59995.464ENSCATG00000042510PRDM59191.840Cercocebus_atys
ENSAMEG00000003050PRDM510091.195ENSCLAG00000005392PRDM59391.195Chinchilla_lanigera
ENSAMEG00000003050PRDM510088.287ENSCSAG00000003729PRDM59188.112Chlorocebus_sabaeus
ENSAMEG00000003050PRDM510092.818ENSCHOG00000007801PRDM57892.486Choloepus_hoffmanni
ENSAMEG00000003050PRDM510078.462ENSCPBG00000024735PRDM59178.120Chrysemys_picta_bellii
ENSAMEG00000003050PRDM510092.138ENSCANG00000036807PRDM59984.328Colobus_angolensis_palliatus
ENSAMEG00000003050PRDM510090.252ENSCGRG00001010581Prdm58790.252Cricetulus_griseus_chok1gshd
ENSAMEG00000003050PRDM510076.174ENSCGRG00000010996-9576.000Cricetulus_griseus_crigri
ENSAMEG00000003050PRDM510072.077ENSCSEG00000019979prdm59172.949Cynoglossus_semilaevis
ENSAMEG00000003050PRDM510069.497ENSCVAG00000013692prdm59169.723Cyprinodon_variegatus
ENSAMEG00000003050PRDM510072.145ENSDARG00000006288prdm59171.453Danio_rerio
ENSAMEG00000003050PRDM510092.201ENSDNOG00000002009PRDM510092.028Dasypus_novemcinctus
ENSAMEG00000003050PRDM510090.566ENSDORG00000007739Prdm58790.566Dipodomys_ordii
ENSAMEG00000003050PRDM510069.271ENSETEG00000020268PRDM59669.097Echinops_telfairi
ENSAMEG00000003050PRDM59965.324ENSEBUG00000004301prdm59166.025Eptatretus_burgeri
ENSAMEG00000003050PRDM510092.535ENSEASG00005018365PRDM59192.361Equus_asinus_asinus
ENSAMEG00000003050PRDM59996.082ENSECAG00000011516PRDM58196.082Equus_caballus
ENSAMEG00000003050PRDM510074.018ENSECAG00000024747-8680.183Equus_caballus
ENSAMEG00000003050PRDM59983.497ENSEEUG00000010306PRDM59083.301Erinaceus_europaeus
ENSAMEG00000003050PRDM59974.743ENSELUG00000005894prdm58374.949Esox_lucius
ENSAMEG00000003050PRDM510093.403ENSFCAG00000025656PRDM59193.229Felis_catus
ENSAMEG00000003050PRDM57874.340ENSFALG00000008381PRDM58373.585Ficedula_albicollis
ENSAMEG00000003050PRDM510091.509ENSFDAG00000021361PRDM58791.509Fukomys_damarensis
ENSAMEG00000003050PRDM510072.251ENSFHEG00000013040prdm59072.426Fundulus_heteroclitus
ENSAMEG00000003050PRDM59469.281ENSGMOG00000012038prdm58769.281Gadus_morhua
ENSAMEG00000003050PRDM510079.793ENSGALG00000011963PRDM59178.793Gallus_gallus
ENSAMEG00000003050PRDM59976.543ENSGAFG00000019233prdm58576.591Gambusia_affinis
ENSAMEG00000003050PRDM59978.541ENSGAGG00000020362PRDM58880.258Gopherus_agassizii
ENSAMEG00000003050PRDM510092.138ENSGGOG00000013562PRDM59191.667Gorilla_gorilla
ENSAMEG00000003050PRDM510072.251ENSHBUG00000023375prdm59072.600Haplochromis_burtoni
ENSAMEG00000003050PRDM510083.333ENSHGLG00000003010PRDM59082.168Heterocephalus_glaber_female
ENSAMEG00000003050PRDM510091.195ENSHGLG00100003696PRDM58791.195Heterocephalus_glaber_male
ENSAMEG00000003050PRDM510073.529ENSHCOG00000012131prdm59173.702Hippocampus_comes
ENSAMEG00000003050PRDM59974.556ENSIPUG00000001248prdm59173.875Ictalurus_punctatus
ENSAMEG00000003050PRDM510087.421ENSSTOG00000004741PRDM59387.421Ictidomys_tridecemlineatus
ENSAMEG00000003050PRDM510090.566ENSJJAG00000011464Prdm59390.566Jaculus_jaculus
ENSAMEG00000003050PRDM510072.600ENSKMAG00000013663prdm59172.600Kryptolebias_marmoratus
ENSAMEG00000003050PRDM510073.657ENSLBEG00000022736prdm59173.875Labrus_bergylta
ENSAMEG00000003050PRDM510078.472ENSLACG00000009187PRDM59978.646Latimeria_chalumnae
ENSAMEG00000003050PRDM510075.217ENSLOCG00000009778prdm59175.043Lepisosteus_oculatus
ENSAMEG00000003050PRDM510088.636ENSLAFG00000006532PRDM59985.220Loxodonta_africana
ENSAMEG00000003050PRDM59995.670ENSMFAG00000045845PRDM59192.014Macaca_fascicularis
ENSAMEG00000003050PRDM510092.138ENSMMUG00000003249PRDM59191.840Macaca_mulatta
ENSAMEG00000003050PRDM59995.670ENSMNEG00000019018PRDM59192.014Macaca_nemestrina
ENSAMEG00000003050PRDM510092.014ENSMLEG00000023145PRDM59691.840Mandrillus_leucophaeus
ENSAMEG00000003050PRDM510074.346ENSMAMG00000013419prdm59174.695Mastacembelus_armatus
ENSAMEG00000003050PRDM510072.251ENSMZEG00005020645prdm59072.600Maylandia_zebra
ENSAMEG00000003050PRDM510079.793ENSMGAG00000010710PRDM59678.793Meleagris_gallopavo
ENSAMEG00000003050PRDM510090.252ENSMAUG00000006768Prdm58790.252Mesocricetus_auratus
ENSAMEG00000003050PRDM510091.195ENSMICG00000001459PRDM59188.889Microcebus_murinus
ENSAMEG00000003050PRDM510090.252ENSMOCG00000016267Prdm58790.252Microtus_ochrogaster
ENSAMEG00000003050PRDM510072.426ENSMMOG00000006035prdm59172.251Mola_mola
ENSAMEG00000003050PRDM510074.957ENSMODG00000018942PRDM59174.611Monodelphis_domestica
ENSAMEG00000003050PRDM510068.935ENSMALG00000013934prdm59068.761Monopterus_albus
ENSAMEG00000003050PRDM510090.566MGP_CAROLIEiJ_G0028463Prdm58790.566Mus_caroli
ENSAMEG00000003050PRDM510090.252ENSMUSG00000029913Prdm58790.252Mus_musculus
ENSAMEG00000003050PRDM510090.566MGP_PahariEiJ_G0022203Prdm58790.566Mus_pahari
ENSAMEG00000003050PRDM510090.252MGP_SPRETEiJ_G0029467Prdm58790.252Mus_spretus
ENSAMEG00000003050PRDM510092.708ENSMPUG00000017415PRDM59193.403Mustela_putorius_furo
ENSAMEG00000003050PRDM510084.629ENSMLUG00000006097PRDM510084.283Myotis_lucifugus
ENSAMEG00000003050PRDM510090.881ENSNGAG00000018317Prdm58790.881Nannospalax_galili
ENSAMEG00000003050PRDM510067.869ENSNBRG00000004976prdm59067.869Neolamprologus_brichardi
ENSAMEG00000003050PRDM510092.138ENSNLEG00000009107PRDM59191.493Nomascus_leucogenys
ENSAMEG00000003050PRDM58176.271ENSMEUG00000006576-6276.271Notamacropus_eugenii
ENSAMEG00000003050PRDM59279.369ENSOPRG00000011066-7780.583Ochotona_princeps
ENSAMEG00000003050PRDM510091.509ENSODEG00000009133PRDM58791.509Octodon_degus
ENSAMEG00000003050PRDM510073.830ENSONIG00000003111prdm59174.221Oreochromis_niloticus
ENSAMEG00000003050PRDM55967.416ENSOANG00000006197-10055.462Ornithorhynchus_anatinus
ENSAMEG00000003050PRDM59975.492ENSOANG00000015109PRDM58675.274Ornithorhynchus_anatinus
ENSAMEG00000003050PRDM510088.542ENSOCUG00000013454PRDM59888.368Oryctolagus_cuniculus
ENSAMEG00000003050PRDM510072.426ENSORLG00000016247prdm59072.600Oryzias_latipes
ENSAMEG00000003050PRDM510072.077ENSORLG00020018051prdm59072.077Oryzias_latipes_hni
ENSAMEG00000003050PRDM510072.426ENSORLG00015013760prdm59072.600Oryzias_latipes_hsok
ENSAMEG00000003050PRDM510072.648ENSOMEG00000005143prdm59172.648Oryzias_melastigma
ENSAMEG00000003050PRDM59283.490ENSOGAG00000009996PRDM59882.868Otolemur_garnettii
ENSAMEG00000003050PRDM59994.286ENSOARG00000015473PRDM59994.066Ovis_aries
ENSAMEG00000003050PRDM510091.840ENSPPAG00000043045PRDM59891.667Pan_paniscus
ENSAMEG00000003050PRDM510093.403ENSPPRG00000001020PRDM59193.229Panthera_pardus
ENSAMEG00000003050PRDM510093.229ENSPTIG00000010807PRDM59193.056Panthera_tigris_altaica
ENSAMEG00000003050PRDM510092.138ENSPTRG00000016403PRDM59191.493Pan_troglodytes
ENSAMEG00000003050PRDM59995.670ENSPANG00000023612PRDM59192.014Papio_anubis
ENSAMEG00000003050PRDM59949.799ENSPKIG00000015492prdm58949.307Paramormyrops_kingsleyae
ENSAMEG00000003050PRDM510078.584ENSPSIG00000013505PRDM59178.238Pelodiscus_sinensis
ENSAMEG00000003050PRDM510069.634ENSPMGG00000012622prdm59069.808Periophthalmus_magnuspinnatus
ENSAMEG00000003050PRDM58268.687ENSPMAG00000005248prdm59967.929Petromyzon_marinus
ENSAMEG00000003050PRDM59967.826ENSPFOG00000018630prdm58467.826Poecilia_formosa
ENSAMEG00000003050PRDM510074.439ENSPLAG00000014148prdm59173.611Poecilia_latipinna
ENSAMEG00000003050PRDM510072.949ENSPMEG00000018002prdm59072.775Poecilia_mexicana
ENSAMEG00000003050PRDM510072.949ENSPREG00000018366prdm59072.775Poecilia_reticulata
ENSAMEG00000003050PRDM510091.840ENSPPYG00000015031PRDM59191.667Pongo_abelii
ENSAMEG00000003050PRDM510085.590ENSPCAG00000011671PRDM59685.417Procavia_capensis
ENSAMEG00000003050PRDM510091.195ENSPCOG00000022828PRDM58791.195Propithecus_coquereli
ENSAMEG00000003050PRDM510084.028ENSPVAG00000012309PRDM59684.028Pteropus_vampyrus
ENSAMEG00000003050PRDM510072.600ENSPNYG00000012194prdm59072.600Pundamilia_nyererei
ENSAMEG00000003050PRDM510070.242ENSPNAG00000023191-9869.550Pygocentrus_nattereri
ENSAMEG00000003050PRDM510071.553ENSPNAG00000026181prdm59172.251Pygocentrus_nattereri
ENSAMEG00000003050PRDM59980.608ENSRNOG00000023679Prdm59080.418Rattus_norvegicus
ENSAMEG00000003050PRDM510092.138ENSRBIG00000041307PRDM59189.757Rhinopithecus_bieti
ENSAMEG00000003050PRDM59978.372ENSRROG00000035343PRDM59581.076Rhinopithecus_roxellana
ENSAMEG00000003050PRDM510091.824ENSSBOG00000022100PRDM59884.023Saimiri_boliviensis_boliviensis
ENSAMEG00000003050PRDM59877.869ENSSHAG00000003250PRDM510078.484Sarcophilus_harrisii
ENSAMEG00000003050PRDM510069.284ENSSFOG00015020478prdm59169.459Scleropages_formosus
ENSAMEG00000003050PRDM510074.003ENSSMAG00000018844prdm59173.875Scophthalmus_maximus
ENSAMEG00000003050PRDM59976.132ENSSDUG00000020397prdm59172.426Seriola_dumerili
ENSAMEG00000003050PRDM510072.251ENSSLDG00000013353prdm59172.426Seriola_lalandi_dorsalis
ENSAMEG00000003050PRDM510078.992ENSSARG00000014129-7678.992Sorex_araneus
ENSAMEG00000003050PRDM510083.333ENSSPUG00000009941PRDM58783.333Sphenodon_punctatus
ENSAMEG00000003050PRDM510074.177ENSSPAG00000013866prdm59174.221Stegastes_partitus
ENSAMEG00000003050PRDM510092.882ENSSSCG00000009101PRDM59588.947Sus_scrofa
ENSAMEG00000003050PRDM510079.514ENSTGUG00000001920PRDM59678.510Taeniopygia_guttata
ENSAMEG00000003050PRDM510072.251ENSTRUG00000013850prdm59172.077Takifugu_rubripes
ENSAMEG00000003050PRDM510058.925ENSTNIG00000005901prdm59158.824Tetraodon_nigroviridis
ENSAMEG00000003050PRDM510089.118ENSTBEG00000015386PRDM58289.118Tupaia_belangeri
ENSAMEG00000003050PRDM510092.361ENSTTRG00000010996PRDM59192.188Tursiops_truncatus
ENSAMEG00000003050PRDM59999.127ENSUAMG00000009994PRDM58092.961Ursus_americanus
ENSAMEG00000003050PRDM510093.750ENSUMAG00000003733PRDM59594.271Ursus_maritimus
ENSAMEG00000003050PRDM510083.420ENSVPAG00000007435PRDM59483.247Vicugna_pacos
ENSAMEG00000003050PRDM510093.576ENSVVUG00000013192PRDM59893.403Vulpes_vulpes
ENSAMEG00000003050PRDM510073.310ENSXETG00000002101prdm59173.137Xenopus_tropicalis
ENSAMEG00000003050PRDM510073.124ENSXCOG00000008567prdm59173.124Xiphophorus_couchianus
ENSAMEG00000003050PRDM59976.337ENSXMAG00000013825prdm59173.124Xiphophorus_maculatus

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