EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000003173 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 20888 bases
Position: chrGL192526.1:2186910-2207797
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000003371	MMR_HSR1	PF01926.23	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000003506	-	681	-	ENSAMEP00000003371	226 (aa)	-	G1L902

Gene Model

Click here to download ENSAMEG00000003173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000003173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000003173	-	74	33.520	ENSAMEG00000018882	RAB9A	85	33.520
ENSAMEG00000003173	-	68	37.107	ENSAMEG00000001127	RAB1A	75	37.107
ENSAMEG00000003173	-	69	34.783	ENSAMEG00000004955	RAB11B	71	34.783
ENSAMEG00000003173	-	77	34.807	ENSAMEG00000005231	RAB30	86	34.807
ENSAMEG00000003173	-	72	33.529	ENSAMEG00000015249	RAB7A	80	33.529
ENSAMEG00000003173	-	68	34.395	ENSAMEG00000000954	RAB5A	71	34.395
ENSAMEG00000003173	-	68	35.032	ENSAMEG00000006003	RAB5C	71	35.032
ENSAMEG00000003173	-	66	31.694	ENSAMEG00000015990	RAB18	76	31.694
ENSAMEG00000003173	-	70	30.247	ENSAMEG00000014249	RAB25	74	30.247
ENSAMEG00000003173	-	68	35.032	ENSAMEG00000003196	RAB5B	71	35.032
ENSAMEG00000003173	-	68	37.736	ENSAMEG00000017135	RAB1B	76	37.736
ENSAMEG00000003173	-	68	35.669	ENSAMEG00000003119	RAB11A	60	35.669
ENSAMEG00000003173	-	70	34.118	ENSAMEG00000018531	RAB9B	81	34.118
ENSAMEG00000003173	-	64	33.333	ENSAMEG00000007452	RAB12	79	30.612
ENSAMEG00000003173	-	54	30.894	ENSAMEG00000005041	-	69	30.894
ENSAMEG00000003173	-	64	35.762	ENSAMEG00000010983	RAB33B	60	35.762
ENSAMEG00000003173	-	70	31.098	ENSAMEG00000009075	RAB39B	75	31.098
ENSAMEG00000003173	-	64	36.184	ENSAMEG00000014916	RAB33A	62	36.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000003173	-	99	87.111	ENSG00000144134	RABL2A	100	88.136	Homo_sapiens
ENSAMEG00000003173	-	99	87.111	ENSG00000079974	RABL2B	100	87.379	Homo_sapiens
ENSAMEG00000003173	-	99	75.446	ENSAPOG00000023708	rabl2	99	75.446	Acanthochromis_polyacanthus
ENSAMEG00000003173	-	99	71.749	ENSACIG00000000670	rabl2	99	71.749	Amphilophus_citrinellus
ENSAMEG00000003173	-	99	75.446	ENSAOCG00000008069	rabl2	99	75.446	Amphiprion_ocellaris
ENSAMEG00000003173	-	99	75.000	ENSAPEG00000003164	rabl2	99	75.000	Amphiprion_percula
ENSAMEG00000003173	-	93	78.571	ENSATEG00000001111	rabl2	93	78.571	Anabas_testudineus
ENSAMEG00000003173	-	74	84.524	ENSACAG00000000418	-	93	84.524	Anolis_carolinensis
ENSAMEG00000003173	-	99	85.778	ENSANAG00000021001	-	97	85.778	Aotus_nancymaae
ENSAMEG00000003173	-	99	73.991	ENSACLG00000025632	rabl2	99	73.991	Astatotilapia_calliptera
ENSAMEG00000003173	-	93	79.524	ENSAMXG00000040611	rabl2	93	79.524	Astyanax_mexicanus
ENSAMEG00000003173	-	100	86.522	ENSBTAG00000004876	RABL2B	100	86.957	Bos_taurus
ENSAMEG00000003173	-	99	87.111	ENSCJAG00000018414	-	97	87.111	Callithrix_jacchus
ENSAMEG00000003173	-	100	91.630	ENSCAFG00020006938	-	100	91.630	Canis_lupus_dingo
ENSAMEG00000003173	-	100	83.830	ENSCHIG00000000591	-	100	84.255	Capra_hircus
ENSAMEG00000003173	-	99	83.111	ENSTSYG00000004323	-	97	83.111	Carlito_syrichta
ENSAMEG00000003173	-	97	86.425	ENSCPOG00000026899	-	98	86.425	Cavia_porcellus
ENSAMEG00000003173	-	99	87.111	ENSCCAG00000025944	-	97	87.111	Cebus_capucinus
ENSAMEG00000003173	-	99	84.889	ENSCATG00000034307	-	97	84.889	Cercocebus_atys
ENSAMEG00000003173	-	99	87.111	ENSCLAG00000017218	-	99	87.111	Chinchilla_lanigera
ENSAMEG00000003173	-	99	85.903	ENSCSAG00000004698	-	97	85.903	Chlorocebus_sabaeus
ENSAMEG00000003173	-	95	80.841	ENSCPBG00000011715	-	93	80.841	Chrysemys_picta_bellii
ENSAMEG00000003173	-	81	65.761	ENSCING00000004961	-	84	65.761	Ciona_intestinalis
ENSAMEG00000003173	-	81	66.848	ENSCSAVG00000006042	-	87	66.848	Ciona_savignyi
ENSAMEG00000003173	-	99	84.889	ENSCANG00000030879	-	97	84.889	Colobus_angolensis_palliatus
ENSAMEG00000003173	-	100	86.344	ENSCGRG00001021894	Rabl2	100	86.344	Cricetulus_griseus_chok1gshd
ENSAMEG00000003173	-	91	76.699	ENSCSEG00000005479	rabl2	92	76.190	Cynoglossus_semilaevis
ENSAMEG00000003173	-	95	74.766	ENSCVAG00000011432	rabl2	96	74.766	Cyprinodon_variegatus
ENSAMEG00000003173	-	99	73.543	ENSDARG00000063321	rabl2	99	73.543	Danio_rerio
ENSAMEG00000003173	-	99	90.708	ENSDNOG00000035151	-	99	90.708	Dasypus_novemcinctus
ENSAMEG00000003173	-	100	86.344	ENSDORG00000000003	Rabl2	100	86.344	Dipodomys_ordii
ENSAMEG00000003173	-	100	89.868	ENSEASG00005008239	-	100	89.868	Equus_asinus_asinus
ENSAMEG00000003173	-	100	90.308	ENSECAG00000026942	-	100	90.308	Equus_caballus
ENSAMEG00000003173	-	100	93.833	ENSFCAG00000033642	-	100	93.833	Felis_catus
ENSAMEG00000003173	-	100	86.784	ENSFDAG00000002113	-	100	86.784	Fukomys_damarensis
ENSAMEG00000003173	-	99	73.991	ENSFHEG00000015015	rabl2	83	73.991	Fundulus_heteroclitus
ENSAMEG00000003173	-	89	76.119	ENSGMOG00000018928	rabl2	100	76.119	Gadus_morhua
ENSAMEG00000003173	-	100	76.652	ENSGALG00000032458	RABL2B	100	76.652	Gallus_gallus
ENSAMEG00000003173	-	87	79.082	ENSGAFG00000005188	rabl2	95	74.537	Gambusia_affinis
ENSAMEG00000003173	-	94	76.056	ENSGACG00000012474	rabl2	95	76.056	Gasterosteus_aculeatus
ENSAMEG00000003173	-	99	73.991	ENSHBUG00000010964	rabl2	99	73.991	Haplochromis_burtoni
ENSAMEG00000003173	-	100	86.344	ENSHGLG00000005750	-	100	86.344	Heterocephalus_glaber_female
ENSAMEG00000003173	-	100	86.344	ENSHGLG00100016281	-	100	86.344	Heterocephalus_glaber_male
ENSAMEG00000003173	-	100	89.427	ENSSTOG00000002723	-	100	89.427	Ictidomys_tridecemlineatus
ENSAMEG00000003173	-	100	84.141	ENSJJAG00000010792	Rabl2	100	84.141	Jaculus_jaculus
ENSAMEG00000003173	-	99	75.000	ENSKMAG00000012723	rabl2	99	75.000	Kryptolebias_marmoratus
ENSAMEG00000003173	-	99	76.786	ENSLBEG00000003644	rabl2	99	76.786	Labrus_bergylta
ENSAMEG00000003173	-	95	78.972	ENSLACG00000003722	rabl2	94	78.972	Latimeria_chalumnae
ENSAMEG00000003173	-	95	80.374	ENSLOCG00000016767	rabl2	93	80.374	Lepisosteus_oculatus
ENSAMEG00000003173	-	99	86.222	ENSMFAG00000044775	-	97	86.222	Macaca_fascicularis
ENSAMEG00000003173	-	99	86.222	ENSMMUG00000022914	RABL2B	97	86.222	Macaca_mulatta
ENSAMEG00000003173	-	99	85.778	ENSMNEG00000028460	-	96	85.778	Macaca_nemestrina
ENSAMEG00000003173	-	99	84.889	ENSMLEG00000032621	-	96	84.889	Mandrillus_leucophaeus
ENSAMEG00000003173	-	93	78.571	ENSMAMG00000008168	rabl2	92	78.571	Mastacembelus_armatus
ENSAMEG00000003173	-	93	75.238	ENSMZEG00005019758	rabl2	95	75.238	Maylandia_zebra
ENSAMEG00000003173	-	99	84.513	ENSMAUG00000010955	Rabl2	100	84.513	Mesocricetus_auratus
ENSAMEG00000003173	-	99	91.111	ENSMICG00000031301	-	97	91.111	Microcebus_murinus
ENSAMEG00000003173	-	99	84.071	ENSMOCG00000002775	Rabl2	99	84.071	Microtus_ochrogaster
ENSAMEG00000003173	-	88	90.452	ENSMODG00000010838	-	89	90.452	Monodelphis_domestica
ENSAMEG00000003173	-	93	77.619	ENSMALG00000005944	rabl2	92	77.619	Monopterus_albus
ENSAMEG00000003173	-	100	82.819	MGP_CAROLIEiJ_G0020176	Rabl2	99	82.819	Mus_caroli
ENSAMEG00000003173	-	100	81.938	ENSMUSG00000022621	Rabl2	100	81.938	Mus_musculus
ENSAMEG00000003173	-	100	82.819	MGP_PahariEiJ_G0020181	Rabl2	100	82.819	Mus_pahari
ENSAMEG00000003173	-	100	81.938	MGP_SPRETEiJ_G0021073	Rabl2	100	81.938	Mus_spretus
ENSAMEG00000003173	-	100	92.511	ENSMPUG00000001806	-	100	92.511	Mustela_putorius_furo
ENSAMEG00000003173	-	99	81.416	ENSNGAG00000012843	Rabl2	96	81.416	Nannospalax_galili
ENSAMEG00000003173	-	99	73.991	ENSNBRG00000000489	rabl2	99	73.991	Neolamprologus_brichardi
ENSAMEG00000003173	-	99	86.667	ENSNLEG00000030435	-	96	86.667	Nomascus_leucogenys
ENSAMEG00000003173	-	100	85.463	ENSODEG00000015650	-	100	85.463	Octodon_degus
ENSAMEG00000003173	-	99	74.439	ENSONIG00000014885	rabl2	99	74.439	Oreochromis_niloticus
ENSAMEG00000003173	-	95	74.299	ENSORLG00000009874	rabl2	93	74.299	Oryzias_latipes
ENSAMEG00000003173	-	95	74.299	ENSORLG00020001721	rabl2	93	74.299	Oryzias_latipes_hni
ENSAMEG00000003173	-	95	74.299	ENSORLG00015014268	rabl2	93	74.299	Oryzias_latipes_hsok
ENSAMEG00000003173	-	95	75.234	ENSOMEG00000008576	rabl2	97	75.234	Oryzias_melastigma
ENSAMEG00000003173	-	99	91.111	ENSOGAG00000009123	-	97	91.111	Otolemur_garnettii
ENSAMEG00000003173	-	100	91.266	ENSPPRG00000014642	-	99	91.266	Panthera_pardus
ENSAMEG00000003173	-	100	93.833	ENSPTIG00000018747	-	100	93.833	Panthera_tigris_altaica
ENSAMEG00000003173	-	99	82.128	ENSPTRG00000014555	-	97	82.128	Pan_troglodytes
ENSAMEG00000003173	-	99	81.624	ENSPANG00000036121	-	96	81.624	Papio_anubis
ENSAMEG00000003173	-	95	78.605	ENSPKIG00000025372	rabl2	94	78.605	Paramormyrops_kingsleyae
ENSAMEG00000003173	-	96	81.106	ENSPSIG00000014041	-	95	81.106	Pelodiscus_sinensis
ENSAMEG00000003173	-	89	76.119	ENSPMGG00000012946	rabl2	96	76.119	Periophthalmus_magnuspinnatus
ENSAMEG00000003173	-	100	84.141	ENSPEMG00000024045	Rabl2	100	84.141	Peromyscus_maniculatus_bairdii
ENSAMEG00000003173	-	96	81.696	ENSPCIG00000012436	-	91	81.696	Phascolarctos_cinereus
ENSAMEG00000003173	-	89	78.818	ENSPFOG00000017960	rabl2	90	78.818	Poecilia_formosa
ENSAMEG00000003173	-	89	79.602	ENSPLAG00000015685	rabl2	90	79.602	Poecilia_latipinna
ENSAMEG00000003173	-	89	79.602	ENSPMEG00000004703	rabl2	90	79.602	Poecilia_mexicana
ENSAMEG00000003173	-	88	77.273	ENSPREG00000014761	rabl2	96	77.273	Poecilia_reticulata
ENSAMEG00000003173	-	99	86.667	ENSPPYG00000012000	-	97	86.667	Pongo_abelii
ENSAMEG00000003173	-	99	91.556	ENSPCOG00000024865	-	97	91.556	Propithecus_coquereli
ENSAMEG00000003173	-	99	83.966	ENSPVAG00000004539	-	98	83.966	Pteropus_vampyrus
ENSAMEG00000003173	-	99	73.991	ENSPNYG00000004845	rabl2	99	73.991	Pundamilia_nyererei
ENSAMEG00000003173	-	91	80.000	ENSPNAG00000024254	rabl2	99	76.106	Pygocentrus_nattereri
ENSAMEG00000003173	-	100	83.260	ENSRNOG00000013947	Rabl2	89	83.260	Rattus_norvegicus
ENSAMEG00000003173	-	99	85.333	ENSRBIG00000033607	-	97	85.333	Rhinopithecus_bieti
ENSAMEG00000003173	-	99	86.222	ENSRROG00000031130	-	97	86.222	Rhinopithecus_roxellana
ENSAMEG00000003173	-	99	87.556	ENSSBOG00000033266	-	97	87.556	Saimiri_boliviensis_boliviensis
ENSAMEG00000003173	-	92	78.365	ENSSFOG00015020738	rabl2	92	78.571	Scleropages_formosus
ENSAMEG00000003173	-	93	77.619	ENSSMAG00000004606	rabl2	92	77.619	Scophthalmus_maximus
ENSAMEG00000003173	-	99	72.889	ENSSDUG00000014765	rabl2	99	72.889	Seriola_dumerili
ENSAMEG00000003173	-	77	90.805	ENSSSCG00000025041	-	100	90.805	Sus_scrofa
ENSAMEG00000003173	-	92	76.190	ENSTGUG00000016028	-	99	76.190	Taeniopygia_guttata
ENSAMEG00000003173	-	99	75.000	ENSTRUG00000012454	rabl2	99	75.000	Takifugu_rubripes
ENSAMEG00000003173	-	99	74.554	ENSTNIG00000017951	rabl2	99	74.554	Tetraodon_nigroviridis
ENSAMEG00000003173	-	89	97.015	ENSUAMG00000015761	-	88	97.015	Ursus_americanus
ENSAMEG00000003173	-	100	96.916	ENSUMAG00000017116	-	100	96.916	Ursus_maritimus
ENSAMEG00000003173	-	100	92.511	ENSVVUG00000025761	-	100	92.511	Vulpes_vulpes
ENSAMEG00000003173	-	92	78.469	ENSXETG00000015712	rabl2b	91	78.469	Xenopus_tropicalis
ENSAMEG00000003173	-	88	79.899	ENSXMAG00000004569	rabl2	95	75.463	Xiphophorus_maculatus