EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000003200 (Gene tree)
Gene ID: 100472283
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 23379 bases
Position: chrGL193155.1:734247-757625
Accession: 100472283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000003397	ResIII	PF04851.15	4.6e-07	1	1
ENSAMEP00000003397	DEAD	PF00270.29	4.6e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000003532	DDX42-201	2808	XM_002924516	ENSAMEP00000003397	935 (aa)	XP_002924562	G1L927

Gene Model

Click here to download ENSAMEG00000003200's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000003200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000003200	DDX42	53	43.651	ENSAMEG00000017873	DDX46	61	44.820
ENSAMEG00000003200	DDX42	58	38.172	ENSAMEG00000002685	DDX5	71	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000003200	DDX42	100	96.170	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSAMEG00000003200	DDX42	90	76.443	ENSAPOG00000017675	ddx42	98	72.638	Acanthochromis_polyacanthus
ENSAMEG00000003200	DDX42	84	71.824	ENSACIG00000007376	ddx42	99	72.264	Amphilophus_citrinellus
ENSAMEG00000003200	DDX42	100	70.711	ENSAOCG00000003520	ddx42	99	72.147	Amphiprion_ocellaris
ENSAMEG00000003200	DDX42	100	70.877	ENSAPEG00000000984	ddx42	99	71.967	Amphiprion_percula
ENSAMEG00000003200	DDX42	100	70.864	ENSATEG00000022920	ddx42	99	73.073	Anabas_testudineus
ENSAMEG00000003200	DDX42	100	85.021	ENSAPLG00000010544	DDX42	100	84.167	Anas_platyrhynchos
ENSAMEG00000003200	DDX42	100	84.060	ENSACAG00000003994	DDX42	99	84.233	Anolis_carolinensis
ENSAMEG00000003200	DDX42	100	96.368	ENSANAG00000035693	DDX42	100	96.368	Aotus_nancymaae
ENSAMEG00000003200	DDX42	89	77.180	ENSACLG00000025113	ddx42	99	72.479	Astatotilapia_calliptera
ENSAMEG00000003200	DDX42	80	80.871	ENSAMXG00000011435	ddx42	100	71.113	Astyanax_mexicanus
ENSAMEG00000003200	DDX42	100	95.248	ENSBTAG00000021058	DDX42	98	97.286	Bos_taurus
ENSAMEG00000003200	DDX42	64	52.673	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSAMEG00000003200	DDX42	100	96.368	ENSCJAG00000019649	DDX42	99	98.693	Callithrix_jacchus
ENSAMEG00000003200	DDX42	100	98.182	ENSCAFG00000012818	DDX42	100	98.182	Canis_familiaris
ENSAMEG00000003200	DDX42	100	98.289	ENSCAFG00020026631	DDX42	100	98.289	Canis_lupus_dingo
ENSAMEG00000003200	DDX42	100	96.277	ENSCHIG00000014431	DDX42	100	96.277	Capra_hircus
ENSAMEG00000003200	DDX42	100	95.945	ENSTSYG00000001380	DDX42	100	95.945	Carlito_syrichta
ENSAMEG00000003200	DDX42	72	75.740	ENSCAPG00000013621	DDX42	94	75.740	Cavia_aperea
ENSAMEG00000003200	DDX42	100	95.833	ENSCPOG00000005633	DDX42	100	95.833	Cavia_porcellus
ENSAMEG00000003200	DDX42	100	91.026	ENSCCAG00000020612	DDX42	100	95.813	Cebus_capucinus
ENSAMEG00000003200	DDX42	100	96.684	ENSCATG00000030490	DDX42	100	96.684	Cercocebus_atys
ENSAMEG00000003200	DDX42	100	96.257	ENSCLAG00000003497	DDX42	100	96.257	Chinchilla_lanigera
ENSAMEG00000003200	DDX42	100	92.593	ENSCSAG00000003914	DDX42	100	92.593	Chlorocebus_sabaeus
ENSAMEG00000003200	DDX42	79	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSAMEG00000003200	DDX42	100	84.848	ENSCPBG00000026682	DDX42	100	85.162	Chrysemys_picta_bellii
ENSAMEG00000003200	DDX42	100	96.791	ENSCANG00000034663	DDX42	99	98.129	Colobus_angolensis_palliatus
ENSAMEG00000003200	DDX42	100	94.551	ENSCGRG00001009775	Ddx42	100	94.551	Cricetulus_griseus_chok1gshd
ENSAMEG00000003200	DDX42	100	94.551	ENSCGRG00000011718	Ddx42	100	94.551	Cricetulus_griseus_crigri
ENSAMEG00000003200	DDX42	89	74.614	ENSCSEG00000021574	ddx42	99	70.390	Cynoglossus_semilaevis
ENSAMEG00000003200	DDX42	100	70.339	ENSCVAG00000011404	ddx42	99	71.868	Cyprinodon_variegatus
ENSAMEG00000003200	DDX42	100	70.335	ENSDARG00000037928	ddx42	99	70.564	Danio_rerio
ENSAMEG00000003200	DDX42	100	89.883	ENSDNOG00000007961	DDX42	100	89.883	Dasypus_novemcinctus
ENSAMEG00000003200	DDX42	100	87.527	ENSDORG00000004199	Ddx42	100	87.207	Dipodomys_ordii
ENSAMEG00000003200	DDX42	65	60.514	FBgn0036104	CG6418	87	56.052	Drosophila_melanogaster
ENSAMEG00000003200	DDX42	80	73.342	ENSEBUG00000001155	ddx42	91	73.210	Eptatretus_burgeri
ENSAMEG00000003200	DDX42	100	97.650	ENSEASG00005013089	DDX42	100	97.650	Equus_asinus_asinus
ENSAMEG00000003200	DDX42	100	97.650	ENSECAG00000022684	DDX42	100	97.650	Equus_caballus
ENSAMEG00000003200	DDX42	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSAMEG00000003200	DDX42	100	69.511	ENSELUG00000020593	ddx42	100	70.262	Esox_lucius
ENSAMEG00000003200	DDX42	100	98.396	ENSFCAG00000003499	DDX42	100	98.396	Felis_catus
ENSAMEG00000003200	DDX42	94	85.570	ENSFALG00000004675	DDX42	72	89.316	Ficedula_albicollis
ENSAMEG00000003200	DDX42	100	96.158	ENSFDAG00000020516	DDX42	100	96.158	Fukomys_damarensis
ENSAMEG00000003200	DDX42	100	68.678	ENSFHEG00000023290	ddx42	99	71.053	Fundulus_heteroclitus
ENSAMEG00000003200	DDX42	75	78.138	ENSGMOG00000004595	ddx42	79	78.138	Gadus_morhua
ENSAMEG00000003200	DDX42	100	83.385	ENSGALG00000000581	DDX42	100	82.238	Gallus_gallus
ENSAMEG00000003200	DDX42	89	74.822	ENSGAFG00000011846	ddx42	97	73.451	Gambusia_affinis
ENSAMEG00000003200	DDX42	100	68.264	ENSGACG00000009782	ddx42	100	67.872	Gasterosteus_aculeatus
ENSAMEG00000003200	DDX42	100	85.236	ENSGAGG00000024411	DDX42	99	85.026	Gopherus_agassizii
ENSAMEG00000003200	DDX42	100	96.578	ENSGGOG00000006779	DDX42	100	96.578	Gorilla_gorilla
ENSAMEG00000003200	DDX42	89	77.419	ENSHBUG00000008705	ddx42	99	72.689	Haplochromis_burtoni
ENSAMEG00000003200	DDX42	100	91.444	ENSHGLG00000010024	DDX42	100	91.444	Heterocephalus_glaber_female
ENSAMEG00000003200	DDX42	100	96.364	ENSHGLG00100004479	-	100	96.364	Heterocephalus_glaber_male
ENSAMEG00000003200	DDX42	94	73.143	ENSHGLG00100007138	-	95	73.143	Heterocephalus_glaber_male
ENSAMEG00000003200	DDX42	84	77.962	ENSHCOG00000003357	ddx42	97	75.732	Hippocampus_comes
ENSAMEG00000003200	DDX42	80	79.657	ENSIPUG00000013327	ddx42	100	70.370	Ictalurus_punctatus
ENSAMEG00000003200	DDX42	100	97.439	ENSSTOG00000008922	DDX42	100	97.439	Ictidomys_tridecemlineatus
ENSAMEG00000003200	DDX42	100	95.080	ENSJJAG00000011727	Ddx42	100	95.080	Jaculus_jaculus
ENSAMEG00000003200	DDX42	100	69.947	ENSKMAG00000009914	ddx42	99	72.516	Kryptolebias_marmoratus
ENSAMEG00000003200	DDX42	89	71.260	ENSLBEG00000004687	ddx42	100	67.474	Labrus_bergylta
ENSAMEG00000003200	DDX42	99	77.054	ENSLACG00000013476	DDX42	97	78.533	Latimeria_chalumnae
ENSAMEG00000003200	DDX42	100	74.173	ENSLOCG00000011764	ddx42	100	73.918	Lepisosteus_oculatus
ENSAMEG00000003200	DDX42	100	97.115	ENSLAFG00000003249	DDX42	100	97.115	Loxodonta_africana
ENSAMEG00000003200	DDX42	100	96.684	ENSMFAG00000031356	DDX42	100	96.684	Macaca_fascicularis
ENSAMEG00000003200	DDX42	100	95.851	ENSMMUG00000016762	DDX42	100	95.859	Macaca_mulatta
ENSAMEG00000003200	DDX42	100	96.684	ENSMNEG00000038250	DDX42	100	96.684	Macaca_nemestrina
ENSAMEG00000003200	DDX42	100	96.383	ENSMLEG00000043080	DDX42	100	96.383	Mandrillus_leucophaeus
ENSAMEG00000003200	DDX42	90	77.187	ENSMAMG00000021888	ddx42	98	72.176	Mastacembelus_armatus
ENSAMEG00000003200	DDX42	89	77.180	ENSMZEG00005023103	ddx42	99	72.479	Maylandia_zebra
ENSAMEG00000003200	DDX42	100	83.801	ENSMGAG00000001822	DDX42	100	83.817	Meleagris_gallopavo
ENSAMEG00000003200	DDX42	75	96.733	ENSMAUG00000020774	-	94	96.733	Mesocricetus_auratus
ENSAMEG00000003200	DDX42	100	97.115	ENSMICG00000009952	DDX42	100	96.474	Microcebus_murinus
ENSAMEG00000003200	DDX42	100	94.017	ENSMOCG00000015504	Ddx42	100	93.803	Microtus_ochrogaster
ENSAMEG00000003200	DDX42	89	72.262	ENSMMOG00000016963	ddx42	87	69.796	Mola_mola
ENSAMEG00000003200	DDX42	50	98.073	ENSMODG00000009917	-	98	98.073	Monodelphis_domestica
ENSAMEG00000003200	DDX42	100	72.311	ENSMALG00000007800	ddx42	99	72.766	Monopterus_albus
ENSAMEG00000003200	DDX42	100	95.085	MGP_CAROLIEiJ_G0017314	Ddx42	100	95.085	Mus_caroli
ENSAMEG00000003200	DDX42	100	95.085	ENSMUSG00000020705	Ddx42	100	95.085	Mus_musculus
ENSAMEG00000003200	DDX42	78	99.553	MGP_PahariEiJ_G0018444	-	100	99.553	Mus_pahari
ENSAMEG00000003200	DDX42	100	95.085	MGP_SPRETEiJ_G0018158	Ddx42	100	95.085	Mus_spretus
ENSAMEG00000003200	DDX42	100	98.085	ENSMPUG00000014921	DDX42	100	98.085	Mustela_putorius_furo
ENSAMEG00000003200	DDX42	100	95.579	ENSMLUG00000011645	DDX42	100	95.579	Myotis_lucifugus
ENSAMEG00000003200	DDX42	100	94.973	ENSNGAG00000021897	Ddx42	100	94.973	Nannospalax_galili
ENSAMEG00000003200	DDX42	89	75.866	ENSNBRG00000004466	ddx42	99	71.489	Neolamprologus_brichardi
ENSAMEG00000003200	DDX42	100	96.578	ENSNLEG00000004248	DDX42	99	97.989	Nomascus_leucogenys
ENSAMEG00000003200	DDX42	74	82.788	ENSMEUG00000013227	-	85	82.788	Notamacropus_eugenii
ENSAMEG00000003200	DDX42	100	95.527	ENSOPRG00000014960	DDX42	100	95.527	Ochotona_princeps
ENSAMEG00000003200	DDX42	100	92.727	ENSODEG00000007810	DDX42	100	92.727	Octodon_degus
ENSAMEG00000003200	DDX42	89	77.300	ENSONIG00000000734	ddx42	99	72.584	Oreochromis_niloticus
ENSAMEG00000003200	DDX42	58	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSAMEG00000003200	DDX42	95	96.300	ENSOCUG00000004304	DDX42	88	96.300	Oryctolagus_cuniculus
ENSAMEG00000003200	DDX42	100	70.899	ENSORLG00000002395	ddx42	100	70.159	Oryzias_latipes
ENSAMEG00000003200	DDX42	100	71.142	ENSORLG00020011621	ddx42	100	71.519	Oryzias_latipes_hni
ENSAMEG00000003200	DDX42	100	71.036	ENSORLG00015004487	ddx42	100	71.519	Oryzias_latipes_hsok
ENSAMEG00000003200	DDX42	100	70.213	ENSOMEG00000020093	ddx42	100	70.995	Oryzias_melastigma
ENSAMEG00000003200	DDX42	100	96.486	ENSOGAG00000006872	DDX42	100	96.486	Otolemur_garnettii
ENSAMEG00000003200	DDX42	100	95.781	ENSOARG00000013540	DDX42	100	95.781	Ovis_aries
ENSAMEG00000003200	DDX42	100	96.791	ENSPPAG00000007496	DDX42	100	96.791	Pan_paniscus
ENSAMEG00000003200	DDX42	100	98.182	ENSPPRG00000002740	DDX42	100	98.182	Panthera_pardus
ENSAMEG00000003200	DDX42	100	98.075	ENSPTIG00000009932	DDX42	100	98.075	Panthera_tigris_altaica
ENSAMEG00000003200	DDX42	100	96.791	ENSPTRG00000009523	DDX42	100	96.791	Pan_troglodytes
ENSAMEG00000003200	DDX42	100	96.684	ENSPANG00000020990	DDX42	100	96.684	Papio_anubis
ENSAMEG00000003200	DDX42	100	69.649	ENSPKIG00000002901	ddx42	100	70.000	Paramormyrops_kingsleyae
ENSAMEG00000003200	DDX42	85	92.298	ENSPSIG00000010289	DDX42	98	91.995	Pelodiscus_sinensis
ENSAMEG00000003200	DDX42	100	66.843	ENSPMGG00000009323	ddx42	100	68.076	Periophthalmus_magnuspinnatus
ENSAMEG00000003200	DDX42	100	94.771	ENSPEMG00000006755	Ddx42	100	94.771	Peromyscus_maniculatus_bairdii
ENSAMEG00000003200	DDX42	80	72.346	ENSPMAG00000005580	ddx42	100	73.001	Petromyzon_marinus
ENSAMEG00000003200	DDX42	100	91.860	ENSPCIG00000009093	DDX42	100	91.543	Phascolarctos_cinereus
ENSAMEG00000003200	DDX42	100	70.239	ENSPFOG00000014104	ddx42	100	71.132	Poecilia_formosa
ENSAMEG00000003200	DDX42	100	70.239	ENSPLAG00000010522	ddx42	100	71.132	Poecilia_latipinna
ENSAMEG00000003200	DDX42	100	70.668	ENSPMEG00000010744	ddx42	100	71.682	Poecilia_mexicana
ENSAMEG00000003200	DDX42	100	69.772	ENSPREG00000009926	ddx42	100	71.295	Poecilia_reticulata
ENSAMEG00000003200	DDX42	100	94.174	ENSPPYG00000008531	DDX42	100	94.174	Pongo_abelii
ENSAMEG00000003200	DDX42	92	91.183	ENSPCAG00000002474	DDX42	100	91.183	Procavia_capensis
ENSAMEG00000003200	DDX42	100	87.393	ENSPCOG00000001559	DDX42	99	88.679	Propithecus_coquereli
ENSAMEG00000003200	DDX42	100	93.490	ENSPVAG00000000160	DDX42	100	93.490	Pteropus_vampyrus
ENSAMEG00000003200	DDX42	74	74.928	ENSPNYG00000013954	ddx42	97	69.678	Pundamilia_nyererei
ENSAMEG00000003200	DDX42	77	80.654	ENSPNAG00000017352	ddx42	100	69.813	Pygocentrus_nattereri
ENSAMEG00000003200	DDX42	100	95.192	ENSRNOG00000009474	Ddx42	100	95.192	Rattus_norvegicus
ENSAMEG00000003200	DDX42	100	96.684	ENSRBIG00000004781	DDX42	99	97.986	Rhinopithecus_bieti
ENSAMEG00000003200	DDX42	100	96.684	ENSRROG00000029794	DDX42	100	96.684	Rhinopithecus_roxellana
ENSAMEG00000003200	DDX42	100	96.368	ENSSBOG00000029624	DDX42	100	96.368	Saimiri_boliviensis_boliviensis
ENSAMEG00000003200	DDX42	100	92.072	ENSSHAG00000012896	-	100	91.755	Sarcophilus_harrisii
ENSAMEG00000003200	DDX42	71	61.926	ENSSHAG00000007919	-	99	61.481	Sarcophilus_harrisii
ENSAMEG00000003200	DDX42	81	80.438	ENSSFOG00015014064	ddx42	83	80.438	Scleropages_formosus
ENSAMEG00000003200	DDX42	100	70.899	ENSSMAG00000009077	ddx42	100	71.337	Scophthalmus_maximus
ENSAMEG00000003200	DDX42	99	71.294	ENSSDUG00000022221	ddx42	99	72.450	Seriola_dumerili
ENSAMEG00000003200	DDX42	99	71.053	ENSSLDG00000018483	ddx42	100	71.822	Seriola_lalandi_dorsalis
ENSAMEG00000003200	DDX42	100	96.154	ENSSARG00000009847	DDX42	100	96.154	Sorex_araneus
ENSAMEG00000003200	DDX42	100	85.338	ENSSPUG00000018806	DDX42	100	83.837	Sphenodon_punctatus
ENSAMEG00000003200	DDX42	90	76.561	ENSSPAG00000013055	ddx42	99	72.275	Stegastes_partitus
ENSAMEG00000003200	DDX42	86	94.919	ENSSSCG00000017289	DDX42	97	95.409	Sus_scrofa
ENSAMEG00000003200	DDX42	100	83.718	ENSTGUG00000001931	DDX42	100	83.718	Taeniopygia_guttata
ENSAMEG00000003200	DDX42	100	69.649	ENSTRUG00000010711	ddx42	99	81.333	Takifugu_rubripes
ENSAMEG00000003200	DDX42	81	93.816	ENSTBEG00000010159	DDX42	99	93.816	Tupaia_belangeri
ENSAMEG00000003200	DDX42	100	97.118	ENSTTRG00000006962	DDX42	100	97.118	Tursiops_truncatus
ENSAMEG00000003200	DDX42	100	99.465	ENSUAMG00000007321	DDX42	100	99.465	Ursus_americanus
ENSAMEG00000003200	DDX42	100	98.717	ENSUMAG00000017438	DDX42	100	98.717	Ursus_maritimus
ENSAMEG00000003200	DDX42	100	87.714	ENSVPAG00000009633	DDX42	100	87.714	Vicugna_pacos
ENSAMEG00000003200	DDX42	100	98.503	ENSVVUG00000006095	DDX42	100	98.503	Vulpes_vulpes
ENSAMEG00000003200	DDX42	100	76.763	ENSXETG00000003245	ddx42	100	75.206	Xenopus_tropicalis
ENSAMEG00000003200	DDX42	85	69.259	ENSXCOG00000017560	ddx42	97	71.285	Xiphophorus_couchianus
ENSAMEG00000003200	DDX42	100	70.262	ENSXMAG00000008138	ddx42	100	72.204	Xiphophorus_maculatus