EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000003316 (Gene tree)
Gene ID: 100465394
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 27689 bases
Position: chrGL192448.1:2444995-2472683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000003514	SMN	PF06003.12	1.4e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000003652	-	906	-	ENSAMEP00000003514	301 (aa)	-	G1L9E2

Gene Model

Click here to download ENSAMEG00000003316's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000003316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000003316	-	93	88.612	ENSG00000205571	SMN2	95	88.612	Homo_sapiens
ENSAMEG00000003316	-	93	88.612	ENSG00000172062	SMN1	95	88.612	Homo_sapiens
ENSAMEG00000003316	-	89	51.264	ENSAPOG00000011324	smn1	94	52.899	Acanthochromis_polyacanthus
ENSAMEG00000003316	-	85	51.698	ENSACIG00000019772	-	97	50.189	Amphilophus_citrinellus
ENSAMEG00000003316	-	89	51.986	ENSAOCG00000024444	smn1	94	53.261	Amphiprion_ocellaris
ENSAMEG00000003316	-	89	52.347	ENSAPEG00000016504	smn1	94	53.623	Amphiprion_percula
ENSAMEG00000003316	-	88	53.237	ENSATEG00000002182	smn1	83	53.381	Anabas_testudineus
ENSAMEG00000003316	-	66	59.091	ENSAPLG00000010912	-	97	58.081	Anas_platyrhynchos
ENSAMEG00000003316	-	95	55.973	ENSACAG00000010017	-	95	60.215	Anolis_carolinensis
ENSAMEG00000003316	-	96	84.354	ENSANAG00000032133	-	95	85.765	Aotus_nancymaae
ENSAMEG00000003316	-	89	52.297	ENSACLG00000007308	smn1	89	54.348	Astatotilapia_calliptera
ENSAMEG00000003316	-	93	87.589	ENSBTAG00000005743	SMN2	98	87.589	Bos_taurus
ENSAMEG00000003316	-	93	87.234	ENSCJAG00000016290	-	94	88.750	Callithrix_jacchus
ENSAMEG00000003316	-	96	94.118	ENSCAFG00000007812	SMN	97	93.950	Canis_familiaris
ENSAMEG00000003316	-	96	94.097	ENSCAFG00020019229	-	90	93.929	Canis_lupus_dingo
ENSAMEG00000003316	-	93	88.028	ENSCHIG00000015559	-	96	88.028	Capra_hircus
ENSAMEG00000003316	-	95	89.895	ENSTSYG00000012058	-	97	90.323	Carlito_syrichta
ENSAMEG00000003316	-	72	70.046	ENSCAPG00000011021	-	96	69.585	Cavia_aperea
ENSAMEG00000003316	-	95	82.534	ENSCPOG00000012328	-	97	82.230	Cavia_porcellus
ENSAMEG00000003316	-	96	82.594	ENSCPOG00000036973	-	96	82.979	Cavia_porcellus
ENSAMEG00000003316	-	93	87.143	ENSCCAG00000018127	-	94	88.750	Cebus_capucinus
ENSAMEG00000003316	-	93	88.612	ENSCATG00000037002	-	95	88.612	Cercocebus_atys
ENSAMEG00000003316	-	97	81.481	ENSCLAG00000000284	-	96	82.517	Chinchilla_lanigera
ENSAMEG00000003316	-	93	88.256	ENSCSAG00000015688	-	95	88.256	Chlorocebus_sabaeus
ENSAMEG00000003316	-	83	79.365	ENSCHOG00000007346	-	67	89.881	Choloepus_hoffmanni
ENSAMEG00000003316	-	97	62.752	ENSCPBG00000010968	-	99	63.941	Chrysemys_picta_bellii
ENSAMEG00000003316	-	93	89.247	ENSCANG00000038242	-	96	89.098	Colobus_angolensis_palliatus
ENSAMEG00000003316	-	92	81.139	ENSCANG00000033324	-	91	82.222	Colobus_angolensis_palliatus
ENSAMEG00000003316	-	96	66.436	ENSCGRG00001016998	-	97	67.260	Cricetulus_griseus_chok1gshd
ENSAMEG00000003316	-	96	85.172	ENSCGRG00001017959	-	97	85.461	Cricetulus_griseus_chok1gshd
ENSAMEG00000003316	-	96	85.172	ENSCGRG00000007698	Smn1	97	85.461	Cricetulus_griseus_crigri
ENSAMEG00000003316	-	89	46.154	ENSCSEG00000015227	smn1	97	48.432	Cynoglossus_semilaevis
ENSAMEG00000003316	-	89	52.555	ENSCVAG00000007498	smn1	94	52.536	Cyprinodon_variegatus
ENSAMEG00000003316	-	91	49.818	ENSDARG00000018494	smn1	96	51.429	Danio_rerio
ENSAMEG00000003316	-	80	89.212	ENSDNOG00000007283	-	100	89.212	Dasypus_novemcinctus
ENSAMEG00000003316	-	77	74.138	ENSDNOG00000045949	-	92	74.886	Dasypus_novemcinctus
ENSAMEG00000003316	-	93	78.648	ENSDORG00000007082	Smn1	96	78.648	Dipodomys_ordii
ENSAMEG00000003316	-	69	74.396	ENSETEG00000001406	-	89	72.283	Echinops_telfairi
ENSAMEG00000003316	-	92	78.369	ENSEASG00005018000	-	89	84.646	Equus_asinus_asinus
ENSAMEG00000003316	-	96	89.691	ENSECAG00000015215	-	97	90.071	Equus_caballus
ENSAMEG00000003316	-	83	81.600	ENSEEUG00000015777	-	100	81.600	Erinaceus_europaeus
ENSAMEG00000003316	-	89	55.556	ENSELUG00000018067	smn1	94	53.650	Esox_lucius
ENSAMEG00000003316	-	96	92.759	ENSFCAG00000028292	SMN	97	92.908	Felis_catus
ENSAMEG00000003316	-	86	63.498	ENSFALG00000012320	-	91	62.595	Ficedula_albicollis
ENSAMEG00000003316	-	96	81.481	ENSFDAG00000017683	-	96	82.517	Fukomys_damarensis
ENSAMEG00000003316	-	59	51.892	ENSFHEG00000018508	smn1	96	50.362	Fundulus_heteroclitus
ENSAMEG00000003316	-	92	50.542	ENSGMOG00000017279	smn1	93	48.014	Gadus_morhua
ENSAMEG00000003316	-	89	61.481	ENSGALG00000002430	SMN	95	60.370	Gallus_gallus
ENSAMEG00000003316	-	89	52.708	ENSGAFG00000009501	smn1	94	51.648	Gambusia_affinis
ENSAMEG00000003316	-	89	51.111	ENSGACG00000010584	smn1	91	53.731	Gasterosteus_aculeatus
ENSAMEG00000003316	-	95	62.887	ENSGAGG00000011374	-	97	63.214	Gopherus_agassizii
ENSAMEG00000003316	-	89	35.659	ENSGAGG00000013639	-	56	48.485	Gopherus_agassizii
ENSAMEG00000003316	-	91	73.913	ENSGGOG00000003872	-	94	76.812	Gorilla_gorilla
ENSAMEG00000003316	-	61	87.500	ENSGGOG00000026704	-	86	87.500	Gorilla_gorilla
ENSAMEG00000003316	-	89	50.903	ENSHBUG00000013987	smn1	94	55.273	Haplochromis_burtoni
ENSAMEG00000003316	-	96	81.818	ENSHGLG00000001018	-	96	82.867	Heterocephalus_glaber_female
ENSAMEG00000003316	-	96	80.137	ENSHGLG00000001905	-	98	81.720	Heterocephalus_glaber_female
ENSAMEG00000003316	-	92	79.643	ENSHGLG00100018676	-	97	81.273	Heterocephalus_glaber_male
ENSAMEG00000003316	-	96	81.818	ENSHGLG00100011252	-	96	82.867	Heterocephalus_glaber_male
ENSAMEG00000003316	-	86	52.416	ENSHCOG00000017136	smn1	87	51.880	Hippocampus_comes
ENSAMEG00000003316	-	91	51.429	ENSIPUG00000012580	smn1	86	50.909	Ictalurus_punctatus
ENSAMEG00000003316	-	88	91.288	ENSSTOG00000012288	-	96	91.353	Ictidomys_tridecemlineatus
ENSAMEG00000003316	-	58	63.793	ENSJJAG00000014853	-	89	64.000	Jaculus_jaculus
ENSAMEG00000003316	-	89	52.899	ENSKMAG00000007239	smn1	96	49.615	Kryptolebias_marmoratus
ENSAMEG00000003316	-	89	51.971	ENSLBEG00000022550	smn1	94	54.015	Labrus_bergylta
ENSAMEG00000003316	-	89	37.324	ENSLACG00000009808	-	90	39.350	Latimeria_chalumnae
ENSAMEG00000003316	-	89	51.471	ENSLOCG00000011339	smn1	94	53.650	Lepisosteus_oculatus
ENSAMEG00000003316	-	97	88.136	ENSLAFG00000003425	-	100	86.885	Loxodonta_africana
ENSAMEG00000003316	-	93	88.968	ENSMFAG00000031523	SMN1	94	90.000	Macaca_fascicularis
ENSAMEG00000003316	-	93	83.986	ENSMFAG00000008812	-	95	83.986	Macaca_fascicularis
ENSAMEG00000003316	-	93	83.274	ENSMMUG00000030594	-	95	83.274	Macaca_mulatta
ENSAMEG00000003316	-	93	88.968	ENSMMUG00000020214	SMN1	94	90.000	Macaca_mulatta
ENSAMEG00000003316	-	93	88.612	ENSMNEG00000035094	-	94	90.000	Macaca_nemestrina
ENSAMEG00000003316	-	73	76.471	ENSMNEG00000036423	-	86	76.471	Macaca_nemestrina
ENSAMEG00000003316	-	93	88.968	ENSMLEG00000041902	-	95	88.968	Mandrillus_leucophaeus
ENSAMEG00000003316	-	89	52.688	ENSMAMG00000011034	smn1	94	52.536	Mastacembelus_armatus
ENSAMEG00000003316	-	89	50.542	ENSMZEG00005013634	smn1	94	54.909	Maylandia_zebra
ENSAMEG00000003316	-	65	57.360	ENSMGAG00000008889	-	95	55.838	Meleagris_gallopavo
ENSAMEG00000003316	-	96	82.414	ENSMAUG00000010262	Smn1	97	83.214	Mesocricetus_auratus
ENSAMEG00000003316	-	97	74.830	ENSMICG00000034708	-	94	88.750	Microcebus_murinus
ENSAMEG00000003316	-	96	82.069	ENSMOCG00000017833	Smn1	97	82.270	Microtus_ochrogaster
ENSAMEG00000003316	-	89	46.909	ENSMMOG00000005504	smn1	96	50.000	Mola_mola
ENSAMEG00000003316	-	97	70.169	ENSMODG00000001436	-	96	71.831	Monodelphis_domestica
ENSAMEG00000003316	-	89	50.538	ENSMALG00000008025	smn1	94	52.536	Monopterus_albus
ENSAMEG00000003316	-	96	82.474	MGP_CAROLIEiJ_G0018836	Smn1	97	83.630	Mus_caroli
ENSAMEG00000003316	-	96	82.474	ENSMUSG00000021645	Smn1	97	83.630	Mus_musculus
ENSAMEG00000003316	-	96	80.969	MGP_PahariEiJ_G0015911	Smn1	97	81.720	Mus_pahari
ENSAMEG00000003316	-	96	82.131	MGP_SPRETEiJ_G0019718	Smn1	97	83.274	Mus_spretus
ENSAMEG00000003316	-	91	98.182	ENSMPUG00000014470	-	98	98.182	Mustela_putorius_furo
ENSAMEG00000003316	-	98	88.816	ENSMLUG00000010603	-	93	89.619	Myotis_lucifugus
ENSAMEG00000003316	-	96	84.483	ENSNGAG00000019833	Smn1	97	85.106	Nannospalax_galili
ENSAMEG00000003316	-	89	53.381	ENSNBRG00000023000	smn1	94	55.636	Neolamprologus_brichardi
ENSAMEG00000003316	-	96	87.671	ENSNLEG00000004454	-	95	88.612	Nomascus_leucogenys
ENSAMEG00000003316	-	75	65.044	ENSMEUG00000011393	-	99	66.520	Notamacropus_eugenii
ENSAMEG00000003316	-	83	80.237	ENSOPRG00000002015	-	100	81.423	Ochotona_princeps
ENSAMEG00000003316	-	91	84.000	ENSODEG00000015976	-	94	84.644	Octodon_degus
ENSAMEG00000003316	-	89	52.297	ENSONIG00000011799	smn1	95	55.235	Oreochromis_niloticus
ENSAMEG00000003316	-	95	64.583	ENSOANG00000001626	-	96	67.636	Ornithorhynchus_anatinus
ENSAMEG00000003316	-	97	86.644	ENSOCUG00000017097	-	96	86.833	Oryctolagus_cuniculus
ENSAMEG00000003316	-	96	81.633	ENSOCUG00000026649	-	96	84.561	Oryctolagus_cuniculus
ENSAMEG00000003316	-	96	78.571	ENSOCUG00000025183	-	97	79.021	Oryctolagus_cuniculus
ENSAMEG00000003316	-	52	61.783	ENSORLG00000010552	smn1	94	52.747	Oryzias_latipes
ENSAMEG00000003316	-	89	53.903	ENSORLG00020007936	smn1	59	61.146	Oryzias_latipes_hni
ENSAMEG00000003316	-	52	60.256	ENSORLG00015022425	smn1	54	60.256	Oryzias_latipes_hsok
ENSAMEG00000003316	-	89	53.261	ENSOMEG00000007824	smn1	94	52.465	Oryzias_melastigma
ENSAMEG00000003316	-	88	77.941	ENSOGAG00000031414	-	94	77.941	Otolemur_garnettii
ENSAMEG00000003316	-	91	86.182	ENSOARG00000005425	-	100	86.182	Ovis_aries
ENSAMEG00000003316	-	93	88.256	ENSPPAG00000036640	-	95	88.256	Pan_paniscus
ENSAMEG00000003316	-	96	93.103	ENSPPRG00000005575	-	97	93.262	Panthera_pardus
ENSAMEG00000003316	-	96	92.784	ENSPTIG00000007745	-	97	92.933	Panthera_tigris_altaica
ENSAMEG00000003316	-	93	87.676	ENSPTRG00000016955	-	95	87.676	Pan_troglodytes
ENSAMEG00000003316	-	96	88.014	ENSPANG00000013601	-	94	90.000	Papio_anubis
ENSAMEG00000003316	-	92	83.813	ENSPANG00000000253	-	94	84.173	Papio_anubis
ENSAMEG00000003316	-	89	52.688	ENSPKIG00000011096	smn1	94	54.682	Paramormyrops_kingsleyae
ENSAMEG00000003316	-	90	61.131	ENSPSIG00000014787	-	90	59.011	Pelodiscus_sinensis
ENSAMEG00000003316	-	89	49.462	ENSPMGG00000012285	smn1	94	50.719	Periophthalmus_magnuspinnatus
ENSAMEG00000003316	-	93	41.608	ENSPMAG00000005004	smn1	91	41.852	Petromyzon_marinus
ENSAMEG00000003316	-	94	70.526	ENSPCIG00000025764	-	98	71.378	Phascolarctos_cinereus
ENSAMEG00000003316	-	89	53.480	ENSPFOG00000007786	smn1	94	52.381	Poecilia_formosa
ENSAMEG00000003316	-	89	53.846	ENSPLAG00000012071	smn1	94	52.747	Poecilia_latipinna
ENSAMEG00000003316	-	89	53.480	ENSPMEG00000017085	smn1	94	52.381	Poecilia_mexicana
ENSAMEG00000003316	-	89	54.380	ENSPREG00000005824	smn1	94	52.963	Poecilia_reticulata
ENSAMEG00000003316	-	83	55.823	ENSPPYG00000019189	-	99	53.815	Pongo_abelii
ENSAMEG00000003316	-	88	86.891	ENSPPYG00000015533	-	96	86.891	Pongo_abelii
ENSAMEG00000003316	-	88	84.444	ENSPCAG00000004187	-	100	83.704	Procavia_capensis
ENSAMEG00000003316	-	86	69.057	ENSPCOG00000022307	-	100	70.566	Propithecus_coquereli
ENSAMEG00000003316	-	93	94.643	ENSPVAG00000005977	-	96	94.662	Pteropus_vampyrus
ENSAMEG00000003316	-	89	53.381	ENSPNYG00000014148	smn1	94	55.636	Pundamilia_nyererei
ENSAMEG00000003316	-	89	48.905	ENSPNAG00000014007	smn1	82	49.097	Pygocentrus_nattereri
ENSAMEG00000003316	-	96	80.412	ENSRNOG00000018067	Smn1	97	81.139	Rattus_norvegicus
ENSAMEG00000003316	-	93	88.612	ENSRBIG00000037052	-	95	88.889	Rhinopithecus_bieti
ENSAMEG00000003316	-	92	73.477	ENSRBIG00000036775	-	91	74.815	Rhinopithecus_bieti
ENSAMEG00000003316	-	93	88.612	ENSRROG00000039399	-	95	88.889	Rhinopithecus_roxellana
ENSAMEG00000003316	-	96	72.014	ENSRROG00000031088	-	95	72.695	Rhinopithecus_roxellana
ENSAMEG00000003316	-	80	79.681	ENSSBOG00000020112	-	87	80.080	Saimiri_boliviensis_boliviensis
ENSAMEG00000003316	-	93	86.738	ENSSBOG00000011665	-	95	86.738	Saimiri_boliviensis_boliviensis
ENSAMEG00000003316	-	99	69.435	ENSSHAG00000001499	-	100	69.675	Sarcophilus_harrisii
ENSAMEG00000003316	-	89	52.364	ENSSFOG00015015507	smn1	94	51.636	Scleropages_formosus
ENSAMEG00000003316	-	89	50.735	ENSSMAG00000007922	smn1	94	50.725	Scophthalmus_maximus
ENSAMEG00000003316	-	89	52.158	ENSSDUG00000018533	smn1	94	53.430	Seriola_dumerili
ENSAMEG00000003316	-	89	52.158	ENSSLDG00000021135	smn1	94	53.430	Seriola_lalandi_dorsalis
ENSAMEG00000003316	-	94	63.860	ENSSPUG00000000373	-	93	66.171	Sphenodon_punctatus
ENSAMEG00000003316	-	89	50.903	ENSSPAG00000004345	smn1	94	52.899	Stegastes_partitus
ENSAMEG00000003316	-	93	92.199	ENSSSCG00000016970	-	96	92.199	Sus_scrofa
ENSAMEG00000003316	-	71	61.033	ENSSSCG00000033865	-	95	60.185	Sus_scrofa
ENSAMEG00000003316	-	93	68.683	ENSSSCG00000029127	-	94	68.683	Sus_scrofa
ENSAMEG00000003316	-	91	60.932	ENSTGUG00000001548	-	96	61.278	Taeniopygia_guttata
ENSAMEG00000003316	-	89	47.584	ENSTRUG00000000736	smn	95	48.352	Takifugu_rubripes
ENSAMEG00000003316	-	90	49.466	ENSTNIG00000009892	smn1	95	48.029	Tetraodon_nigroviridis
ENSAMEG00000003316	-	64	88.021	ENSTBEG00000002399	-	89	87.500	Tupaia_belangeri
ENSAMEG00000003316	-	93	87.189	ENSTTRG00000005080	-	96	88.256	Tursiops_truncatus
ENSAMEG00000003316	-	72	96.774	ENSUAMG00000024947	-	79	96.774	Ursus_americanus
ENSAMEG00000003316	-	98	98.986	ENSUMAG00000007842	-	76	98.986	Ursus_maritimus
ENSAMEG00000003316	-	88	78.571	ENSVPAG00000009887	-	96	78.571	Vicugna_pacos
ENSAMEG00000003316	-	96	94.118	ENSVVUG00000006934	-	97	93.950	Vulpes_vulpes
ENSAMEG00000003316	-	88	36.396	ENSXETG00000004912	-	80	55.556	Xenopus_tropicalis
ENSAMEG00000003316	-	95	53.608	ENSXETG00000018189	smn2	95	54.196	Xenopus_tropicalis
ENSAMEG00000003316	-	90	53.047	ENSXMAG00000001521	smn1	95	52.330	Xiphophorus_maculatus