EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000003359 (Gene tree)
Gene ID: 100479876
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 84610 bases
Position: chrGL193949.1:29323-113932
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000003538	SpoU_methylase	PF00588.19	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000003676	TARBP1-201	4107	-	ENSAMEP00000003538	1369 (aa)	-	G1L9G6

Gene Model

Click here to download ENSAMEG00000003359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000003359's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000003359	TARBP1	100	85.610	ENSG00000059588	TARBP1	84	85.610	Homo_sapiens
ENSAMEG00000003359	TARBP1	99	44.739	ENSAPOG00000016419	si:dkey-85a20.4	84	44.739	Acanthochromis_polyacanthus
ENSAMEG00000003359	TARBP1	99	44.805	ENSATEG00000020266	si:dkey-85a20.4	83	44.765	Anabas_testudineus
ENSAMEG00000003359	TARBP1	99	66.861	ENSAPLG00000007666	TARBP1	99	67.631	Anas_platyrhynchos
ENSAMEG00000003359	TARBP1	99	60.555	ENSACAG00000001142	TARBP1	85	60.555	Anolis_carolinensis
ENSAMEG00000003359	TARBP1	100	82.542	ENSANAG00000022031	TARBP1	87	82.542	Aotus_nancymaae
ENSAMEG00000003359	TARBP1	99	85.777	ENSBTAG00000004517	TARBP1	84	85.777	Bos_taurus
ENSAMEG00000003359	TARBP1	100	84.806	ENSCJAG00000018155	TARBP1	84	84.806	Callithrix_jacchus
ENSAMEG00000003359	TARBP1	100	92.988	ENSCAFG00000011533	TARBP1	97	92.988	Canis_familiaris
ENSAMEG00000003359	TARBP1	100	92.768	ENSCAFG00020027141	TARBP1	84	92.768	Canis_lupus_dingo
ENSAMEG00000003359	TARBP1	99	84.846	ENSCHIG00000011437	TARBP1	84	84.846	Capra_hircus
ENSAMEG00000003359	TARBP1	96	84.287	ENSTSYG00000010382	TARBP1	99	83.333	Carlito_syrichta
ENSAMEG00000003359	TARBP1	93	69.225	ENSCAPG00000010831	TARBP1	99	69.405	Cavia_aperea
ENSAMEG00000003359	TARBP1	99	78.639	ENSCPOG00000013995	TARBP1	86	78.859	Cavia_porcellus
ENSAMEG00000003359	TARBP1	100	85.318	ENSCCAG00000037278	TARBP1	84	85.318	Cebus_capucinus
ENSAMEG00000003359	TARBP1	100	85.318	ENSCATG00000011754	TARBP1	84	85.318	Cercocebus_atys
ENSAMEG00000003359	TARBP1	96	79.526	ENSCLAG00000003655	TARBP1	96	79.756	Chinchilla_lanigera
ENSAMEG00000003359	TARBP1	94	85.047	ENSCSAG00000010100	TARBP1	99	85.047	Chlorocebus_sabaeus
ENSAMEG00000003359	TARBP1	92	69.788	ENSCPBG00000005587	TARBP1	81	77.116	Chrysemys_picta_bellii
ENSAMEG00000003359	TARBP1	99	85.231	ENSCANG00000034343	TARBP1	99	85.231	Colobus_angolensis_palliatus
ENSAMEG00000003359	TARBP1	99	77.900	ENSCGRG00001016690	Tarbp1	86	77.900	Cricetulus_griseus_chok1gshd
ENSAMEG00000003359	TARBP1	99	77.900	ENSCGRG00000016893	Tarbp1	93	77.900	Cricetulus_griseus_crigri
ENSAMEG00000003359	TARBP1	99	41.588	ENSCSEG00000005255	si:dkey-85a20.4	85	44.681	Cynoglossus_semilaevis
ENSAMEG00000003359	TARBP1	99	45.739	ENSDARG00000079055	si:dkey-85a20.4	99	52.850	Danio_rerio
ENSAMEG00000003359	TARBP1	99	85.850	ENSDNOG00000008637	TARBP1	83	85.850	Dasypus_novemcinctus
ENSAMEG00000003359	TARBP1	95	74.634	ENSDORG00000007984	Tarbp1	100	74.634	Dipodomys_ordii
ENSAMEG00000003359	TARBP1	100	89.351	ENSEASG00005000252	TARBP1	85	89.278	Equus_asinus_asinus
ENSAMEG00000003359	TARBP1	100	88.840	ENSECAG00000023673	TARBP1	83	90.323	Equus_caballus
ENSAMEG00000003359	TARBP1	99	44.253	ENSELUG00000012193	si:dkey-85a20.4	85	44.253	Esox_lucius
ENSAMEG00000003359	TARBP1	100	87.217	ENSFCAG00000014183	TARBP1	84	87.217	Felis_catus
ENSAMEG00000003359	TARBP1	95	67.791	ENSFALG00000013565	TARBP1	99	67.634	Ficedula_albicollis
ENSAMEG00000003359	TARBP1	94	76.183	ENSFDAG00000001308	TARBP1	99	76.412	Fukomys_damarensis
ENSAMEG00000003359	TARBP1	95	52.707	ENSFHEG00000007565	si:dkey-85a20.4	84	52.707	Fundulus_heteroclitus
ENSAMEG00000003359	TARBP1	99	42.867	ENSGMOG00000004549	si:dkey-85a20.4	98	42.971	Gadus_morhua
ENSAMEG00000003359	TARBP1	99	61.898	ENSGALG00000011000	TARBP1	85	61.898	Gallus_gallus
ENSAMEG00000003359	TARBP1	99	44.324	ENSGAFG00000007387	si:dkey-85a20.4	83	44.139	Gambusia_affinis
ENSAMEG00000003359	TARBP1	99	44.300	ENSGACG00000005865	si:dkey-85a20.4	97	44.188	Gasterosteus_aculeatus
ENSAMEG00000003359	TARBP1	99	70.958	ENSGAGG00000012102	TARBP1	87	70.958	Gopherus_agassizii
ENSAMEG00000003359	TARBP1	100	82.580	ENSGGOG00000022879	TARBP1	99	82.653	Gorilla_gorilla
ENSAMEG00000003359	TARBP1	99	45.882	ENSHBUG00000008877	si:dkey-85a20.4	84	45.882	Haplochromis_burtoni
ENSAMEG00000003359	TARBP1	99	79.737	ENSHGLG00000011592	TARBP1	86	79.956	Heterocephalus_glaber_female
ENSAMEG00000003359	TARBP1	99	79.517	ENSHGLG00100015169	TARBP1	94	79.517	Heterocephalus_glaber_male
ENSAMEG00000003359	TARBP1	98	43.358	ENSIPUG00000005249	si:dkey-85a20.4	81	43.434	Ictalurus_punctatus
ENSAMEG00000003359	TARBP1	98	76.335	ENSSTOG00000032291	TARBP1	96	76.335	Ictidomys_tridecemlineatus
ENSAMEG00000003359	TARBP1	99	74.560	ENSJJAG00000017840	Tarbp1	94	74.560	Jaculus_jaculus
ENSAMEG00000003359	TARBP1	86	45.276	ENSKMAG00000017546	si:dkey-85a20.4	74	45.669	Kryptolebias_marmoratus
ENSAMEG00000003359	TARBP1	77	49.264	ENSLBEG00000012132	si:dkey-85a20.4	74	49.398	Labrus_bergylta
ENSAMEG00000003359	TARBP1	99	55.170	ENSLACG00000004337	TARBP1	84	55.170	Latimeria_chalumnae
ENSAMEG00000003359	TARBP1	99	49.745	ENSLOCG00000016214	si:dkey-85a20.4	84	49.745	Lepisosteus_oculatus
ENSAMEG00000003359	TARBP1	99	85.169	ENSLAFG00000011394	TARBP1	86	85.169	Loxodonta_africana
ENSAMEG00000003359	TARBP1	100	82.688	ENSMFAG00000041068	TARBP1	85	82.688	Macaca_fascicularis
ENSAMEG00000003359	TARBP1	100	82.615	ENSMMUG00000021703	TARBP1	84	82.615	Macaca_mulatta
ENSAMEG00000003359	TARBP1	100	85.318	ENSMNEG00000045002	TARBP1	84	85.318	Macaca_nemestrina
ENSAMEG00000003359	TARBP1	99	85.324	ENSMLEG00000044182	TARBP1	99	85.324	Mandrillus_leucophaeus
ENSAMEG00000003359	TARBP1	99	45.658	ENSMAMG00000021760	si:dkey-85a20.4	84	45.658	Mastacembelus_armatus
ENSAMEG00000003359	TARBP1	99	46.026	ENSMZEG00005005751	si:dkey-85a20.4	84	46.026	Maylandia_zebra
ENSAMEG00000003359	TARBP1	99	77.386	ENSMAUG00000020968	Tarbp1	86	77.386	Mesocricetus_auratus
ENSAMEG00000003359	TARBP1	99	76.552	ENSMICG00000015280	TARBP1	83	76.552	Microcebus_murinus
ENSAMEG00000003359	TARBP1	99	75.991	ENSMOCG00000004128	Tarbp1	86	75.991	Microtus_ochrogaster
ENSAMEG00000003359	TARBP1	99	43.374	ENSMMOG00000007795	si:dkey-85a20.4	83	43.519	Mola_mola
ENSAMEG00000003359	TARBP1	99	74.818	ENSMODG00000008504	TARBP1	83	74.818	Monodelphis_domestica
ENSAMEG00000003359	TARBP1	99	44.347	ENSMALG00000002916	si:dkey-85a20.4	84	44.355	Monopterus_albus
ENSAMEG00000003359	TARBP1	99	76.708	MGP_CAROLIEiJ_G0031729	Tarbp1	86	76.708	Mus_caroli
ENSAMEG00000003359	TARBP1	99	76.341	ENSMUSG00000090290	Tarbp1	86	76.341	Mus_musculus
ENSAMEG00000003359	TARBP1	99	76.613	MGP_PahariEiJ_G0023326	Tarbp1	86	76.613	Mus_pahari
ENSAMEG00000003359	TARBP1	99	76.414	MGP_SPRETEiJ_G0032846	Tarbp1	86	76.414	Mus_spretus
ENSAMEG00000003359	TARBP1	91	91.245	ENSMPUG00000002802	TARBP1	99	91.245	Mustela_putorius_furo
ENSAMEG00000003359	TARBP1	100	77.762	ENSMLUG00000002414	TARBP1	99	77.762	Myotis_lucifugus
ENSAMEG00000003359	TARBP1	100	85.756	ENSNLEG00000002518	TARBP1	84	85.756	Nomascus_leucogenys
ENSAMEG00000003359	TARBP1	61	75.636	ENSMEUG00000011370	-	52	75.636	Notamacropus_eugenii
ENSAMEG00000003359	TARBP1	80	84.787	ENSOPRG00000013822	TARBP1	68	84.787	Ochotona_princeps
ENSAMEG00000003359	TARBP1	99	78.136	ENSODEG00000005238	TARBP1	88	78.357	Octodon_degus
ENSAMEG00000003359	TARBP1	99	45.651	ENSONIG00000009789	si:dkey-85a20.4	97	45.651	Oreochromis_niloticus
ENSAMEG00000003359	TARBP1	99	84.103	ENSOCUG00000017418	TARBP1	84	84.103	Oryctolagus_cuniculus
ENSAMEG00000003359	TARBP1	99	42.641	ENSORLG00000010529	si:dkey-85a20.4	83	42.734	Oryzias_latipes
ENSAMEG00000003359	TARBP1	99	42.569	ENSORLG00020019264	si:dkey-85a20.4	83	42.662	Oryzias_latipes_hni
ENSAMEG00000003359	TARBP1	99	42.693	ENSORLG00015003276	si:dkey-85a20.4	83	42.785	Oryzias_latipes_hsok
ENSAMEG00000003359	TARBP1	99	81.652	ENSOGAG00000002379	TARBP1	84	81.652	Otolemur_garnettii
ENSAMEG00000003359	TARBP1	99	84.818	ENSOARG00000003434	TARBP1	91	84.818	Ovis_aries
ENSAMEG00000003359	TARBP1	99	85.704	ENSPPAG00000028097	TARBP1	99	85.704	Pan_paniscus
ENSAMEG00000003359	TARBP1	100	86.267	ENSPPRG00000013561	TARBP1	88	86.194	Panthera_pardus
ENSAMEG00000003359	TARBP1	98	89.658	ENSPTIG00000009281	TARBP1	99	89.658	Panthera_tigris_altaica
ENSAMEG00000003359	TARBP1	100	85.464	ENSPTRG00000002124	TARBP1	84	85.464	Pan_troglodytes
ENSAMEG00000003359	TARBP1	100	85.537	ENSPANG00000021933	TARBP1	84	85.537	Papio_anubis
ENSAMEG00000003359	TARBP1	99	46.724	ENSPKIG00000016716	si:dkey-85a20.4	82	46.724	Paramormyrops_kingsleyae
ENSAMEG00000003359	TARBP1	94	69.099	ENSPSIG00000010699	TARBP1	99	69.099	Pelodiscus_sinensis
ENSAMEG00000003359	TARBP1	99	77.606	ENSPEMG00000006888	Tarbp1	90	77.606	Peromyscus_maniculatus_bairdii
ENSAMEG00000003359	TARBP1	91	83.010	ENSPCIG00000029710	TARBP1	82	83.010	Phascolarctos_cinereus
ENSAMEG00000003359	TARBP1	99	44.452	ENSPFOG00000013020	si:dkey-85a20.4	97	44.452	Poecilia_formosa
ENSAMEG00000003359	TARBP1	99	44.597	ENSPLAG00000006044	si:dkey-85a20.4	84	44.412	Poecilia_latipinna
ENSAMEG00000003359	TARBP1	99	44.597	ENSPMEG00000017857	si:dkey-85a20.4	84	44.412	Poecilia_mexicana
ENSAMEG00000003359	TARBP1	99	44.540	ENSPREG00000022753	si:dkey-85a20.4	84	44.357	Poecilia_reticulata
ENSAMEG00000003359	TARBP1	89	92.982	ENSPPYG00000000102	TARBP1	83	92.982	Pongo_abelii
ENSAMEG00000003359	TARBP1	83	86.364	ENSPCAG00000004808	TARBP1	70	86.364	Procavia_capensis
ENSAMEG00000003359	TARBP1	99	83.346	ENSPCOG00000005666	TARBP1	84	83.346	Propithecus_coquereli
ENSAMEG00000003359	TARBP1	99	68.636	ENSPVAG00000014798	TARBP1	85	68.636	Pteropus_vampyrus
ENSAMEG00000003359	TARBP1	99	45.065	ENSPNYG00000019135	si:dkey-85a20.4	83	45.065	Pundamilia_nyererei
ENSAMEG00000003359	TARBP1	99	71.418	ENSRNOG00000053574	Tarbp1	86	71.418	Rattus_norvegicus
ENSAMEG00000003359	TARBP1	100	79.255	ENSRBIG00000043362	TARBP1	93	79.255	Rhinopithecus_bieti
ENSAMEG00000003359	TARBP1	100	85.245	ENSRROG00000029527	TARBP1	88	85.245	Rhinopithecus_roxellana
ENSAMEG00000003359	TARBP1	99	84.934	ENSSBOG00000034503	TARBP1	97	84.934	Saimiri_boliviensis_boliviensis
ENSAMEG00000003359	TARBP1	99	74.595	ENSSHAG00000000013	TARBP1	100	74.595	Sarcophilus_harrisii
ENSAMEG00000003359	TARBP1	99	43.894	ENSSFOG00015002660	si:dkey-85a20.4	96	44.866	Scleropages_formosus
ENSAMEG00000003359	TARBP1	99	45.279	ENSSMAG00000007081	si:dkey-85a20.4	82	45.533	Scophthalmus_maximus
ENSAMEG00000003359	TARBP1	99	43.456	ENSSDUG00000023566	si:dkey-85a20.4	84	43.814	Seriola_dumerili
ENSAMEG00000003359	TARBP1	99	45.435	ENSSLDG00000020200	si:dkey-85a20.4	84	45.704	Seriola_lalandi_dorsalis
ENSAMEG00000003359	TARBP1	90	84.562	ENSSARG00000012207	TARBP1	76	84.562	Sorex_araneus
ENSAMEG00000003359	TARBP1	99	66.691	ENSSPUG00000015364	TARBP1	85	66.691	Sphenodon_punctatus
ENSAMEG00000003359	TARBP1	99	44.803	ENSSPAG00000007213	si:dkey-85a20.4	84	44.803	Stegastes_partitus
ENSAMEG00000003359	TARBP1	99	86.111	ENSSSCG00000010160	TARBP1	83	89.011	Sus_scrofa
ENSAMEG00000003359	TARBP1	95	67.125	ENSTGUG00000010214	TARBP1	100	67.125	Taeniopygia_guttata
ENSAMEG00000003359	TARBP1	99	43.292	ENSTNIG00000016586	si:dkey-85a20.4	99	43.592	Tetraodon_nigroviridis
ENSAMEG00000003359	TARBP1	94	84.006	ENSTTRG00000008707	TARBP1	83	83.953	Tursiops_truncatus
ENSAMEG00000003359	TARBP1	97	97.741	ENSUMAG00000006730	TARBP1	99	97.741	Ursus_maritimus
ENSAMEG00000003359	TARBP1	86	90.722	ENSVPAG00000007665	TARBP1	81	90.722	Vicugna_pacos
ENSAMEG00000003359	TARBP1	100	92.915	ENSVVUG00000007460	TARBP1	97	92.768	Vulpes_vulpes
ENSAMEG00000003359	TARBP1	99	55.102	ENSXETG00000016224	tarbp1	99	55.102	Xenopus_tropicalis
ENSAMEG00000003359	TARBP1	90	48.295	ENSXCOG00000011779	si:dkey-85a20.4	91	48.295	Xiphophorus_couchianus
ENSAMEG00000003359	TARBP1	77	42.354	ENSXMAG00000009600	si:dkey-85a20.4	100	42.115	Xiphophorus_maculatus