EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000003710 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 2985 bases
Position: chrGL192531.1:646863-649847
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000003922	RRM_1	PF00076.22	9.3e-21	1	2
ENSAMEP00000003922	RRM_1	PF00076.22	9.3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000004081	SRSF6-201	1038	-	ENSAMEP00000003922	345 (aa)	-	G1LAJ9

Gene Model

Click here to download ENSAMEG00000003710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000003710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000003710	SRSF6	52	52.778	ENSAMEG00000014574	SRSF5	66	52.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000003710	SRSF6	94	85.583	ENSG00000124193	SRSF6	94	85.846	Homo_sapiens
ENSAMEG00000003710	SRSF6	76	57.895	ENSACIG00000020091	-	95	60.156	Amphilophus_citrinellus
ENSAMEG00000003710	SRSF6	53	70.652	ENSAOCG00000004309	-	57	69.189	Amphiprion_ocellaris
ENSAMEG00000003710	SRSF6	53	72.043	ENSAPEG00000013086	-	53	71.123	Amphiprion_percula
ENSAMEG00000003710	SRSF6	54	67.539	ENSAPEG00000020746	-	66	65.608	Amphiprion_percula
ENSAMEG00000003710	SRSF6	53	65.957	ENSATEG00000007255	-	71	65.054	Anabas_testudineus
ENSAMEG00000003710	SRSF6	94	69.018	ENSACAG00000002061	SRSF6	92	73.065	Anolis_carolinensis
ENSAMEG00000003710	SRSF6	94	84.663	ENSANAG00000024080	SRSF6	94	84.923	Aotus_nancymaae
ENSAMEG00000003710	SRSF6	53	68.449	ENSAMXG00000003101	-	51	67.539	Astyanax_mexicanus
ENSAMEG00000003710	SRSF6	53	68.449	ENSAMXG00000042692	-	96	58.993	Astyanax_mexicanus
ENSAMEG00000003710	SRSF6	93	87.616	ENSBTAG00000008527	SRSF6	94	87.692	Bos_taurus
ENSAMEG00000003710	SRSF6	54	78.723	ENSCJAG00000048403	SRSF6	69	78.723	Callithrix_jacchus
ENSAMEG00000003710	SRSF6	94	88.272	ENSCAFG00000009289	SRSF6	94	88.272	Canis_familiaris
ENSAMEG00000003710	SRSF6	94	88.272	ENSCAFG00020013559	SRSF6	94	88.272	Canis_lupus_dingo
ENSAMEG00000003710	SRSF6	94	88.000	ENSCHIG00000015890	-	94	88.000	Capra_hircus
ENSAMEG00000003710	SRSF6	94	87.385	ENSCHIG00000009148	-	94	87.385	Capra_hircus
ENSAMEG00000003710	SRSF6	100	82.659	ENSTSYG00000026476	SRSF6	100	82.948	Carlito_syrichta
ENSAMEG00000003710	SRSF6	94	66.667	ENSCPOG00000011761	SRSF6	70	93.182	Cavia_porcellus
ENSAMEG00000003710	SRSF6	94	84.969	ENSCCAG00000026018	-	94	85.231	Cebus_capucinus
ENSAMEG00000003710	SRSF6	94	58.663	ENSCCAG00000018540	-	62	70.370	Cebus_capucinus
ENSAMEG00000003710	SRSF6	94	85.538	ENSCATG00000030794	SRSF6	94	85.538	Cercocebus_atys
ENSAMEG00000003710	SRSF6	94	84.923	ENSCLAG00000010247	SRSF6	94	84.923	Chinchilla_lanigera
ENSAMEG00000003710	SRSF6	94	85.538	ENSCSAG00000014022	SRSF6	94	85.538	Chlorocebus_sabaeus
ENSAMEG00000003710	SRSF6	85	97.222	ENSCHOG00000000561	SRSF6	86	97.222	Choloepus_hoffmanni
ENSAMEG00000003710	SRSF6	54	73.545	ENSCPBG00000018200	SRSF6	94	71.343	Chrysemys_picta_bellii
ENSAMEG00000003710	SRSF6	100	82.370	ENSCANG00000042529	-	100	82.659	Colobus_angolensis_palliatus
ENSAMEG00000003710	SRSF6	94	85.231	ENSCANG00000037774	-	94	85.231	Colobus_angolensis_palliatus
ENSAMEG00000003710	SRSF6	94	85.494	ENSCGRG00001022339	Srsf6	95	85.846	Cricetulus_griseus_chok1gshd
ENSAMEG00000003710	SRSF6	62	94.419	ENSCGRG00000006618	Srsf6	100	94.419	Cricetulus_griseus_crigri
ENSAMEG00000003710	SRSF6	53	68.085	ENSDARG00000016783	srsf6b	69	56.716	Danio_rerio
ENSAMEG00000003710	SRSF6	94	84.308	ENSDNOG00000008410	SRSF6	94	84.308	Dasypus_novemcinctus
ENSAMEG00000003710	SRSF6	94	85.583	ENSDORG00000028378	Srsf6	94	85.846	Dipodomys_ordii
ENSAMEG00000003710	SRSF6	93	83.489	ENSETEG00000006221	SRSF6	94	79.403	Echinops_telfairi
ENSAMEG00000003710	SRSF6	94	83.951	ENSEASG00005023429	SRSF6	94	83.951	Equus_asinus_asinus
ENSAMEG00000003710	SRSF6	94	83.951	ENSECAG00000023932	SRSF6	94	83.951	Equus_caballus
ENSAMEG00000003710	SRSF6	56	94.872	ENSEEUG00000002324	SRSF6	90	94.924	Erinaceus_europaeus
ENSAMEG00000003710	SRSF6	88	55.844	ENSELUG00000024182	SRSF6	90	56.452	Esox_lucius
ENSAMEG00000003710	SRSF6	92	53.750	ENSELUG00000013506	SRSF6	63	65.591	Esox_lucius
ENSAMEG00000003710	SRSF6	94	88.272	ENSFCAG00000032814	SRSF6	94	88.272	Felis_catus
ENSAMEG00000003710	SRSF6	94	80.000	ENSFDAG00000012191	SRSF6	92	97.222	Fukomys_damarensis
ENSAMEG00000003710	SRSF6	87	60.855	ENSFHEG00000023065	srsf6a	55	71.892	Fundulus_heteroclitus
ENSAMEG00000003710	SRSF6	71	52.439	ENSGMOG00000006105	srsf6a	62	58.889	Gadus_morhua
ENSAMEG00000003710	SRSF6	53	66.310	ENSGMOG00000014458	srsf6a	52	66.321	Gadus_morhua
ENSAMEG00000003710	SRSF6	93	71.341	ENSGALG00000000990	SRSF6	54	71.875	Gallus_gallus
ENSAMEG00000003710	SRSF6	87	51.183	ENSGACG00000006084	srsf6a	61	62.037	Gasterosteus_aculeatus
ENSAMEG00000003710	SRSF6	54	73.545	ENSGAGG00000003238	SRSF6	94	71.343	Gopherus_agassizii
ENSAMEG00000003710	SRSF6	94	85.583	ENSGGOG00000009808	SRSF6	94	85.846	Gorilla_gorilla
ENSAMEG00000003710	SRSF6	63	62.009	ENSHBUG00000006386	-	58	69.730	Haplochromis_burtoni
ENSAMEG00000003710	SRSF6	94	84.923	ENSHGLG00000007348	SRSF6	94	84.923	Heterocephalus_glaber_female
ENSAMEG00000003710	SRSF6	91	67.516	ENSHGLG00000007701	-	58	64.894	Heterocephalus_glaber_female
ENSAMEG00000003710	SRSF6	94	80.308	ENSHGLG00100005043	SRSF6	92	97.222	Heterocephalus_glaber_male
ENSAMEG00000003710	SRSF6	53	65.761	ENSHCOG00000002740	srsf6a	57	64.865	Hippocampus_comes
ENSAMEG00000003710	SRSF6	53	71.351	ENSIPUG00000004776	-	76	56.327	Ictalurus_punctatus
ENSAMEG00000003710	SRSF6	94	84.969	ENSSTOG00000010866	SRSF6	94	85.231	Ictidomys_tridecemlineatus
ENSAMEG00000003710	SRSF6	87	54.817	ENSKMAG00000011934	srsf6a	59	67.568	Kryptolebias_marmoratus
ENSAMEG00000003710	SRSF6	53	69.189	ENSLBEG00000007356	srsf6a	52	68.449	Labrus_bergylta
ENSAMEG00000003710	SRSF6	90	69.649	ENSLACG00000005466	SRSF6	54	72.043	Latimeria_chalumnae
ENSAMEG00000003710	SRSF6	69	96.234	ENSLAFG00000006682	SRSF6	91	96.581	Loxodonta_africana
ENSAMEG00000003710	SRSF6	94	85.538	ENSMFAG00000036925	SRSF6	94	85.538	Macaca_fascicularis
ENSAMEG00000003710	SRSF6	94	85.538	ENSMMUG00000006742	SRSF6	94	85.538	Macaca_mulatta
ENSAMEG00000003710	SRSF6	94	85.538	ENSMNEG00000027392	-	94	85.538	Macaca_nemestrina
ENSAMEG00000003710	SRSF6	93	84.830	ENSMNEG00000038270	-	94	84.923	Macaca_nemestrina
ENSAMEG00000003710	SRSF6	62	96.759	ENSMLEG00000031524	SRSF6	100	96.759	Mandrillus_leucophaeus
ENSAMEG00000003710	SRSF6	53	71.505	ENSMAMG00000017161	srsf6a	53	70.588	Mastacembelus_armatus
ENSAMEG00000003710	SRSF6	53	67.033	ENSMZEG00005020658	-	60	65.934	Maylandia_zebra
ENSAMEG00000003710	SRSF6	63	62.500	ENSMZEG00005008032	-	57	69.730	Maylandia_zebra
ENSAMEG00000003710	SRSF6	94	86.154	ENSMICG00000008537	SRSF6	94	86.420	Microcebus_murinus
ENSAMEG00000003710	SRSF6	62	94.419	ENSMOCG00000018738	Srsf6	100	94.419	Microtus_ochrogaster
ENSAMEG00000003710	SRSF6	54	75.401	ENSMODG00000003107	SRSF6	55	75.132	Monodelphis_domestica
ENSAMEG00000003710	SRSF6	94	84.877	MGP_CAROLIEiJ_G0024606	Srsf6	95	84.877	Mus_caroli
ENSAMEG00000003710	SRSF6	94	84.877	ENSMUSG00000016921	Srsf6	95	85.231	Mus_musculus
ENSAMEG00000003710	SRSF6	94	85.185	MGP_PahariEiJ_G0026050	Srsf6	95	85.185	Mus_pahari
ENSAMEG00000003710	SRSF6	94	84.877	MGP_SPRETEiJ_G0025528	Srsf6	95	85.231	Mus_spretus
ENSAMEG00000003710	SRSF6	83	86.806	ENSMPUG00000017692	SRSF6	99	86.806	Mustela_putorius_furo
ENSAMEG00000003710	SRSF6	93	82.663	ENSMLUG00000016618	SRSF6	94	81.707	Myotis_lucifugus
ENSAMEG00000003710	SRSF6	94	83.692	ENSNGAG00000017560	Srsf6	95	83.077	Nannospalax_galili
ENSAMEG00000003710	SRSF6	94	85.583	ENSNLEG00000006524	SRSF6	94	85.846	Nomascus_leucogenys
ENSAMEG00000003710	SRSF6	54	75.401	ENSMEUG00000014615	SRSF6	62	75.132	Notamacropus_eugenii
ENSAMEG00000003710	SRSF6	75	96.911	ENSOPRG00000002017	-	100	96.911	Ochotona_princeps
ENSAMEG00000003710	SRSF6	53	71.739	ENSONIG00000001925	-	54	58.298	Oreochromis_niloticus
ENSAMEG00000003710	SRSF6	53	70.652	ENSONIG00000020247	-	53	70.811	Oreochromis_niloticus
ENSAMEG00000003710	SRSF6	67	42.609	ENSOCUG00000023999	-	70	53.889	Oryctolagus_cuniculus
ENSAMEG00000003710	SRSF6	84	83.721	ENSOCUG00000009785	-	64	75.000	Oryctolagus_cuniculus
ENSAMEG00000003710	SRSF6	94	85.538	ENSOGAG00000014468	SRSF6	94	85.802	Otolemur_garnettii
ENSAMEG00000003710	SRSF6	93	88.545	ENSOARG00000003117	SRSF6	94	88.923	Ovis_aries
ENSAMEG00000003710	SRSF6	90	71.028	ENSPPAG00000043131	-	100	73.248	Pan_paniscus
ENSAMEG00000003710	SRSF6	94	85.276	ENSPPAG00000034327	-	94	85.538	Pan_paniscus
ENSAMEG00000003710	SRSF6	94	88.272	ENSPPRG00000008917	SRSF6	94	88.272	Panthera_pardus
ENSAMEG00000003710	SRSF6	99	56.471	ENSPTIG00000021305	-	51	52.174	Panthera_tigris_altaica
ENSAMEG00000003710	SRSF6	62	100.000	ENSPTIG00000019153	SRSF6	100	100.000	Panthera_tigris_altaica
ENSAMEG00000003710	SRSF6	94	85.276	ENSPTRG00000044686	-	94	85.538	Pan_troglodytes
ENSAMEG00000003710	SRSF6	90	71.028	ENSPTRG00000046274	-	100	73.248	Pan_troglodytes
ENSAMEG00000003710	SRSF6	94	85.538	ENSPANG00000035224	SRSF6	94	85.538	Papio_anubis
ENSAMEG00000003710	SRSF6	100	58.166	ENSPKIG00000018463	-	67	67.027	Paramormyrops_kingsleyae
ENSAMEG00000003710	SRSF6	52	60.556	ENSPKIG00000015703	-	95	41.830	Paramormyrops_kingsleyae
ENSAMEG00000003710	SRSF6	89	61.935	ENSPMGG00000014963	srsf6a	55	72.432	Periophthalmus_magnuspinnatus
ENSAMEG00000003710	SRSF6	54	75.401	ENSPCIG00000003820	SRSF6	55	75.132	Phascolarctos_cinereus
ENSAMEG00000003710	SRSF6	53	87.931	ENSPFOG00000006437	srsf6a	50	65.816	Poecilia_formosa
ENSAMEG00000003710	SRSF6	87	53.918	ENSPLAG00000009243	srsf6a	80	56.250	Poecilia_latipinna
ENSAMEG00000003710	SRSF6	53	69.730	ENSPMEG00000006042	SRSF6	54	69.355	Poecilia_mexicana
ENSAMEG00000003710	SRSF6	94	85.583	ENSPPYG00000011019	SRSF6	94	85.846	Pongo_abelii
ENSAMEG00000003710	SRSF6	92	82.445	ENSPCAG00000010954	SRSF6	56	77.660	Procavia_capensis
ENSAMEG00000003710	SRSF6	94	86.462	ENSPCOG00000026364	SRSF6	94	86.728	Propithecus_coquereli
ENSAMEG00000003710	SRSF6	94	84.615	ENSPVAG00000015232	SRSF6	94	84.615	Pteropus_vampyrus
ENSAMEG00000003710	SRSF6	94	84.877	ENSRNOG00000006380	Srsf6	95	85.231	Rattus_norvegicus
ENSAMEG00000003710	SRSF6	93	84.830	ENSRBIG00000041414	SRSF6	94	84.000	Rhinopithecus_bieti
ENSAMEG00000003710	SRSF6	94	85.538	ENSRROG00000029989	SRSF6	94	85.538	Rhinopithecus_roxellana
ENSAMEG00000003710	SRSF6	94	84.663	ENSSBOG00000033708	-	94	84.923	Saimiri_boliviensis_boliviensis
ENSAMEG00000003710	SRSF6	93	60.248	ENSSBOG00000034078	-	54	61.202	Saimiri_boliviensis_boliviensis
ENSAMEG00000003710	SRSF6	54	75.401	ENSSHAG00000012805	SRSF6	55	75.132	Sarcophilus_harrisii
ENSAMEG00000003710	SRSF6	89	56.083	ENSSFOG00015019681	-	53	67.526	Scleropages_formosus
ENSAMEG00000003710	SRSF6	53	64.481	ENSSMAG00000017447	-	55	64.865	Scophthalmus_maximus
ENSAMEG00000003710	SRSF6	53	71.505	ENSSDUG00000016097	srsf6a	53	70.588	Seriola_dumerili
ENSAMEG00000003710	SRSF6	53	71.505	ENSSLDG00000022841	srsf6a	54	70.588	Seriola_lalandi_dorsalis
ENSAMEG00000003710	SRSF6	75	98.062	ENSSARG00000001602	SRSF6	100	98.062	Sorex_araneus
ENSAMEG00000003710	SRSF6	53	73.913	ENSSPUG00000004967	SRSF6	94	77.778	Sphenodon_punctatus
ENSAMEG00000003710	SRSF6	76	59.925	ENSSPAG00000002362	srsf6a	67	69.474	Stegastes_partitus
ENSAMEG00000003710	SRSF6	94	87.077	ENSSSCG00000007362	SRSF6	94	87.077	Sus_scrofa
ENSAMEG00000003710	SRSF6	93	74.462	ENSTGUG00000003455	SRSF6	54	74.603	Taeniopygia_guttata
ENSAMEG00000003710	SRSF6	87	60.726	ENSTNIG00000001692	srsf6a	57	69.519	Tetraodon_nigroviridis
ENSAMEG00000003710	SRSF6	66	96.522	ENSTBEG00000013448	SRSF6	74	97.009	Tupaia_belangeri
ENSAMEG00000003710	SRSF6	75	98.456	ENSTTRG00000015410	SRSF6	100	98.456	Tursiops_truncatus
ENSAMEG00000003710	SRSF6	94	88.272	ENSUAMG00000003559	SRSF6	94	88.272	Ursus_americanus
ENSAMEG00000003710	SRSF6	62	100.000	ENSUMAG00000001154	SRSF6	100	100.000	Ursus_maritimus
ENSAMEG00000003710	SRSF6	83	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos
ENSAMEG00000003710	SRSF6	53	69.565	ENSXMAG00000021849	srsf6a	55	69.730	Xiphophorus_maculatus