EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000003975 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 7606 bases
Position: chrGL193422.1:444539-452144
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000004184	RRM_1	PF00076.22	8.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000004351	SLIRP-201	273	-	ENSAMEP00000004184	91 (aa)	-	D2HUS4

Gene Model

Click here to download ENSAMEG00000003975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000003975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000003975	SLIRP	93	35.385	ENSAMEG00000006465	HNRNPAB	56	35.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000003975	SLIRP	85	81.818	ENSG00000119705	SLIRP	97	80.899	Homo_sapiens
ENSAMEG00000003975	SLIRP	77	57.143	ENSAPOG00000001298	slirp	70	57.143	Acanthochromis_polyacanthus
ENSAMEG00000003975	SLIRP	90	52.439	ENSACIG00000023083	slirp	81	52.439	Amphilophus_citrinellus
ENSAMEG00000003975	SLIRP	77	60.000	ENSAOCG00000006342	slirp	71	60.000	Amphiprion_ocellaris
ENSAMEG00000003975	SLIRP	77	60.000	ENSAPEG00000015719	-	71	60.000	Amphiprion_percula
ENSAMEG00000003975	SLIRP	77	60.000	ENSAPEG00000015917	slirp	71	60.000	Amphiprion_percula
ENSAMEG00000003975	SLIRP	77	52.857	ENSATEG00000013525	slirp	70	52.857	Anabas_testudineus
ENSAMEG00000003975	SLIRP	77	54.286	ENSAMXG00000018693	slirp	70	54.286	Astyanax_mexicanus
ENSAMEG00000003975	SLIRP	100	79.121	ENSCJAG00000016946	SLIRP	96	80.899	Callithrix_jacchus
ENSAMEG00000003975	SLIRP	100	81.319	ENSCAFG00020015876	-	82	81.319	Canis_lupus_dingo
ENSAMEG00000003975	SLIRP	100	80.220	ENSCCAG00000030130	SLIRP	83	80.220	Cebus_capucinus
ENSAMEG00000003975	SLIRP	100	79.121	ENSCATG00000036327	SLIRP	96	79.775	Cercocebus_atys
ENSAMEG00000003975	SLIRP	88	78.750	ENSCSAG00000011736	SLIRP	83	80.220	Chlorocebus_sabaeus
ENSAMEG00000003975	SLIRP	98	53.933	ENSCPBG00000026327	SLIRP	90	53.933	Chrysemys_picta_bellii
ENSAMEG00000003975	SLIRP	82	81.333	ENSCANG00000032892	SLIRP	91	80.899	Colobus_angolensis_palliatus
ENSAMEG00000003975	SLIRP	100	73.626	ENSCGRG00001024068	Slirp	82	73.626	Cricetulus_griseus_chok1gshd
ENSAMEG00000003975	SLIRP	100	73.626	ENSCGRG00000017440	Slirp	82	73.626	Cricetulus_griseus_crigri
ENSAMEG00000003975	SLIRP	100	54.945	ENSCSEG00000015766	slirp	82	54.945	Cynoglossus_semilaevis
ENSAMEG00000003975	SLIRP	76	62.319	ENSCVAG00000012504	slirp	68	62.319	Cyprinodon_variegatus
ENSAMEG00000003975	SLIRP	77	52.857	ENSDARG00000097753	slirp	68	52.857	Danio_rerio
ENSAMEG00000003975	SLIRP	78	71.831	ENSDNOG00000007721	SLIRP	83	68.132	Dasypus_novemcinctus
ENSAMEG00000003975	SLIRP	100	73.626	ENSDORG00000012379	Slirp	82	73.626	Dipodomys_ordii
ENSAMEG00000003975	SLIRP	88	68.750	ENSETEG00000010345	SLIRP	84	69.231	Echinops_telfairi
ENSAMEG00000003975	SLIRP	100	86.813	ENSEASG00005020193	SLIRP	82	86.813	Equus_asinus_asinus
ENSAMEG00000003975	SLIRP	90	64.634	ENSEEUG00000007257	SLIRP	81	64.634	Erinaceus_europaeus
ENSAMEG00000003975	SLIRP	77	52.857	ENSELUG00000016800	slirp	69	52.857	Esox_lucius
ENSAMEG00000003975	SLIRP	98	87.640	ENSFCAG00000036326	SLIRP	91	87.640	Felis_catus
ENSAMEG00000003975	SLIRP	77	51.429	ENSFALG00000012583	SLIRP	83	50.000	Ficedula_albicollis
ENSAMEG00000003975	SLIRP	100	68.750	ENSFDAG00000008347	SLIRP	85	68.750	Fukomys_damarensis
ENSAMEG00000003975	SLIRP	67	52.459	ENSFHEG00000004709	slirp	66	52.459	Fundulus_heteroclitus
ENSAMEG00000003975	SLIRP	77	57.143	ENSGMOG00000016948	slirp	67	57.143	Gadus_morhua
ENSAMEG00000003975	SLIRP	89	50.617	ENSGALG00000031238	SLIRP	87	51.765	Gallus_gallus
ENSAMEG00000003975	SLIRP	76	59.420	ENSGAFG00000010998	slirp	69	59.420	Gambusia_affinis
ENSAMEG00000003975	SLIRP	77	58.571	ENSGACG00000020137	slirp	81	58.571	Gasterosteus_aculeatus
ENSAMEG00000003975	SLIRP	90	59.036	ENSGAGG00000009953	SLIRP	57	59.036	Gopherus_agassizii
ENSAMEG00000003975	SLIRP	85	80.519	ENSGGOG00000011059	-	96	80.899	Gorilla_gorilla
ENSAMEG00000003975	SLIRP	100	67.033	ENSHGLG00000018491	SLIRP	82	67.033	Heterocephalus_glaber_female
ENSAMEG00000003975	SLIRP	100	67.033	ENSHGLG00100014153	SLIRP	82	67.033	Heterocephalus_glaber_male
ENSAMEG00000003975	SLIRP	77	60.000	ENSHCOG00000006795	slirp	71	60.000	Hippocampus_comes
ENSAMEG00000003975	SLIRP	77	52.857	ENSIPUG00000010214	SLIRP	70	52.857	Ictalurus_punctatus
ENSAMEG00000003975	SLIRP	88	83.750	ENSSTOG00000034316	SLIRP	82	84.615	Ictidomys_tridecemlineatus
ENSAMEG00000003975	SLIRP	77	44.286	ENSKMAG00000002038	slirp	67	44.286	Kryptolebias_marmoratus
ENSAMEG00000003975	SLIRP	77	54.286	ENSLBEG00000007564	slirp	70	54.286	Labrus_bergylta
ENSAMEG00000003975	SLIRP	77	57.143	ENSLACG00000013434	SLIRP	67	57.143	Latimeria_chalumnae
ENSAMEG00000003975	SLIRP	88	78.750	ENSMFAG00000042960	SLIRP	96	79.775	Macaca_fascicularis
ENSAMEG00000003975	SLIRP	87	79.747	ENSMMUG00000029256	SLIRP	96	80.899	Macaca_mulatta
ENSAMEG00000003975	SLIRP	88	78.750	ENSMNEG00000028921	SLIRP	96	79.775	Macaca_nemestrina
ENSAMEG00000003975	SLIRP	98	79.775	ENSMLEG00000043644	SLIRP	90	80.682	Mandrillus_leucophaeus
ENSAMEG00000003975	SLIRP	77	57.143	ENSMZEG00005004617	slirp	71	57.143	Maylandia_zebra
ENSAMEG00000003975	SLIRP	100	75.824	ENSMAUG00000003857	Slirp	82	75.824	Mesocricetus_auratus
ENSAMEG00000003975	SLIRP	100	76.923	ENSMICG00000012080	SLIRP	85	76.923	Microcebus_murinus
ENSAMEG00000003975	SLIRP	100	78.022	ENSMOCG00000016019	Slirp	90	78.022	Microtus_ochrogaster
ENSAMEG00000003975	SLIRP	77	55.714	ENSMMOG00000018268	slirp	70	55.714	Mola_mola
ENSAMEG00000003975	SLIRP	77	64.286	ENSMODG00000005207	-	99	64.286	Monodelphis_domestica
ENSAMEG00000003975	SLIRP	77	54.286	ENSMALG00000012581	slirp	71	54.286	Monopterus_albus
ENSAMEG00000003975	SLIRP	100	79.121	MGP_CAROLIEiJ_G0017995	Slirp	84	79.121	Mus_caroli
ENSAMEG00000003975	SLIRP	100	82.418	ENSMUSG00000021040	Slirp	92	82.418	Mus_musculus
ENSAMEG00000003975	SLIRP	100	80.220	MGP_SPRETEiJ_G0018840	Slirp	81	80.220	Mus_spretus
ENSAMEG00000003975	SLIRP	88	76.250	ENSMLUG00000029544	-	82	75.824	Myotis_lucifugus
ENSAMEG00000003975	SLIRP	81	78.378	ENSMLUG00000024998	-	82	75.824	Myotis_lucifugus
ENSAMEG00000003975	SLIRP	100	73.626	ENSNGAG00000016363	Slirp	84	73.626	Nannospalax_galili
ENSAMEG00000003975	SLIRP	91	73.494	ENSNLEG00000027238	-	93	75.309	Nomascus_leucogenys
ENSAMEG00000003975	SLIRP	100	76.923	ENSNLEG00000032459	-	95	79.545	Nomascus_leucogenys
ENSAMEG00000003975	SLIRP	100	75.824	ENSODEG00000012580	SLIRP	99	75.824	Octodon_degus
ENSAMEG00000003975	SLIRP	77	57.143	ENSONIG00000011692	slirp	71	57.143	Oreochromis_niloticus
ENSAMEG00000003975	SLIRP	97	58.889	ENSOANG00000022366	SLIRP	81	58.889	Ornithorhynchus_anatinus
ENSAMEG00000003975	SLIRP	77	57.143	ENSORLG00000010761	slirp	54	57.143	Oryzias_latipes
ENSAMEG00000003975	SLIRP	77	58.571	ENSORLG00020022188	slirp	70	58.571	Oryzias_latipes_hni
ENSAMEG00000003975	SLIRP	100	49.451	ENSORLG00015020171	slirp	81	49.451	Oryzias_latipes_hsok
ENSAMEG00000003975	SLIRP	77	58.571	ENSOMEG00000019321	slirp	70	58.571	Oryzias_melastigma
ENSAMEG00000003975	SLIRP	85	80.519	ENSPPAG00000040710	-	96	80.899	Pan_paniscus
ENSAMEG00000003975	SLIRP	98	87.640	ENSPPRG00000014350	SLIRP	91	87.640	Panthera_pardus
ENSAMEG00000003975	SLIRP	98	87.640	ENSPTIG00000014196	SLIRP	91	87.640	Panthera_tigris_altaica
ENSAMEG00000003975	SLIRP	85	80.519	ENSPTRG00000030691	SLIRP	96	80.899	Pan_troglodytes
ENSAMEG00000003975	SLIRP	100	80.220	ENSPANG00000026323	SLIRP	96	80.899	Papio_anubis
ENSAMEG00000003975	SLIRP	66	51.667	ENSPKIG00000008831	slirp	59	51.667	Paramormyrops_kingsleyae
ENSAMEG00000003975	SLIRP	75	64.706	ENSPMGG00000010541	slirp	78	64.706	Periophthalmus_magnuspinnatus
ENSAMEG00000003975	SLIRP	88	75.000	ENSPEMG00000013234	Slirp	89	73.626	Peromyscus_maniculatus_bairdii
ENSAMEG00000003975	SLIRP	69	46.032	ENSPMAG00000009355	slirp	70	46.032	Petromyzon_marinus
ENSAMEG00000003975	SLIRP	88	59.756	ENSPCIG00000026842	-	88	59.756	Phascolarctos_cinereus
ENSAMEG00000003975	SLIRP	75	58.824	ENSPFOG00000006758	slirp	68	58.824	Poecilia_formosa
ENSAMEG00000003975	SLIRP	75	58.824	ENSPLAG00000011140	slirp	68	58.824	Poecilia_latipinna
ENSAMEG00000003975	SLIRP	75	58.824	ENSPMEG00000019535	slirp	68	58.824	Poecilia_mexicana
ENSAMEG00000003975	SLIRP	77	57.143	ENSPREG00000011673	slirp	70	57.143	Poecilia_reticulata
ENSAMEG00000003975	SLIRP	88	73.750	ENSPPYG00000006030	SLIRP	83	74.725	Pongo_abelii
ENSAMEG00000003975	SLIRP	100	78.022	ENSPCOG00000015159	SLIRP	85	78.022	Propithecus_coquereli
ENSAMEG00000003975	SLIRP	77	62.857	ENSPNAG00000008633	slirp	71	62.857	Pygocentrus_nattereri
ENSAMEG00000003975	SLIRP	88	72.500	ENSRBIG00000035817	-	85	74.725	Rhinopithecus_bieti
ENSAMEG00000003975	SLIRP	88	78.750	ENSRBIG00000032222	-	96	80.899	Rhinopithecus_bieti
ENSAMEG00000003975	SLIRP	88	76.250	ENSRBIG00000031396	-	91	78.022	Rhinopithecus_bieti
ENSAMEG00000003975	SLIRP	85	77.922	ENSRBIG00000032998	-	81	79.545	Rhinopithecus_bieti
ENSAMEG00000003975	SLIRP	88	76.250	ENSRROG00000041312	-	90	78.022	Rhinopithecus_roxellana
ENSAMEG00000003975	SLIRP	88	77.500	ENSRROG00000035604	-	91	79.121	Rhinopithecus_roxellana
ENSAMEG00000003975	SLIRP	88	77.500	ENSRROG00000036656	-	96	79.775	Rhinopithecus_roxellana
ENSAMEG00000003975	SLIRP	85	79.221	ENSRROG00000017133	-	92	80.682	Rhinopithecus_roxellana
ENSAMEG00000003975	SLIRP	100	74.725	ENSSBOG00000020014	SLIRP	96	76.404	Saimiri_boliviensis_boliviensis
ENSAMEG00000003975	SLIRP	77	61.429	ENSSFOG00015011165	slirp	71	61.429	Scleropages_formosus
ENSAMEG00000003975	SLIRP	77	50.000	ENSSMAG00000012930	slirp	69	50.000	Scophthalmus_maximus
ENSAMEG00000003975	SLIRP	77	61.429	ENSSLDG00000023136	slirp	64	61.429	Seriola_lalandi_dorsalis
ENSAMEG00000003975	SLIRP	91	50.000	ENSSPUG00000009346	SLIRP	86	50.000	Sphenodon_punctatus
ENSAMEG00000003975	SLIRP	77	54.286	ENSSPAG00000013477	slirp	70	54.286	Stegastes_partitus
ENSAMEG00000003975	SLIRP	100	79.121	ENSSSCG00000028167	SLIRP	82	79.121	Sus_scrofa
ENSAMEG00000003975	SLIRP	77	52.857	ENSTGUG00000012337	SLIRP	83	52.222	Taeniopygia_guttata
ENSAMEG00000003975	SLIRP	75	56.522	ENSTRUG00000020127	slirp	70	53.521	Takifugu_rubripes
ENSAMEG00000003975	SLIRP	100	92.308	ENSUAMG00000022445	SLIRP	82	92.308	Ursus_americanus
ENSAMEG00000003975	SLIRP	100	92.308	ENSUMAG00000007166	SLIRP	82	92.308	Ursus_maritimus
ENSAMEG00000003975	SLIRP	100	80.220	ENSVPAG00000001781	SLIRP	84	80.220	Vicugna_pacos
ENSAMEG00000003975	SLIRP	84	88.158	ENSVVUG00000004436	SLIRP	82	85.714	Vulpes_vulpes
ENSAMEG00000003975	SLIRP	77	58.571	ENSXETG00000030343	SLIRP	79	58.571	Xenopus_tropicalis
ENSAMEG00000003975	SLIRP	75	55.882	ENSXCOG00000009422	slirp	68	55.882	Xiphophorus_couchianus
ENSAMEG00000003975	SLIRP	75	57.353	ENSXMAG00000015655	slirp	68	57.353	Xiphophorus_maculatus