EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000004092 (Gene tree)
Gene ID: 100468067
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 34495 bases
Position: chrGL192515.1:1504215-1538709
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000004323	CMS1	PF14617.6	4.6e-32	1	1
ENSAMEP00000004323	DEAD	PF00270.29	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000004495	CMSS1-201	780	-	ENSAMEP00000004323	259 (aa)	-	G1LBP9

Gene Model

Click here to download ENSAMEG00000004092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000004092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000004092	CMSS1	100	89.961	ENSG00000184220	CMSS1	98	92.500	Homo_sapiens
ENSAMEG00000004092	CMSS1	78	64.039	ENSAPOG00000010604	cmss1	82	64.039	Acanthochromis_polyacanthus
ENSAMEG00000004092	CMSS1	78	54.680	ENSACIG00000021854	cmss1	95	50.988	Amphilophus_citrinellus
ENSAMEG00000004092	CMSS1	78	64.039	ENSAOCG00000013361	cmss1	70	64.039	Amphiprion_ocellaris
ENSAMEG00000004092	CMSS1	78	64.039	ENSAPEG00000005829	cmss1	70	64.039	Amphiprion_percula
ENSAMEG00000004092	CMSS1	87	61.572	ENSATEG00000008209	cmss1	87	58.893	Anabas_testudineus
ENSAMEG00000004092	CMSS1	89	67.532	ENSAPLG00000010542	CMSS1	100	67.532	Anas_platyrhynchos
ENSAMEG00000004092	CMSS1	99	63.019	ENSACAG00000011065	CMSS1	97	63.019	Anolis_carolinensis
ENSAMEG00000004092	CMSS1	100	88.846	ENSANAG00000023565	CMSS1	99	88.846	Aotus_nancymaae
ENSAMEG00000004092	CMSS1	78	61.084	ENSACLG00000027294	cmss1	83	55.967	Astatotilapia_calliptera
ENSAMEG00000004092	CMSS1	78	54.726	ENSAMXG00000002046	cmss1	82	52.869	Astyanax_mexicanus
ENSAMEG00000004092	CMSS1	97	89.200	ENSBTAG00000013663	CMSS1	93	88.760	Bos_taurus
ENSAMEG00000004092	CMSS1	100	88.462	ENSCJAG00000000610	CMSS1	99	88.462	Callithrix_jacchus
ENSAMEG00000004092	CMSS1	100	93.436	ENSCAFG00000009230	CMSS1	93	93.436	Canis_familiaris
ENSAMEG00000004092	CMSS1	99	93.023	ENSCAFG00020009464	-	94	92.664	Canis_lupus_dingo
ENSAMEG00000004092	CMSS1	90	86.325	ENSCAFG00020024156	-	77	82.591	Canis_lupus_dingo
ENSAMEG00000004092	CMSS1	99	88.372	ENSCHIG00000013003	CMSS1	93	88.372	Capra_hircus
ENSAMEG00000004092	CMSS1	100	88.031	ENSTSYG00000009266	CMSS1	99	88.031	Carlito_syrichta
ENSAMEG00000004092	CMSS1	86	72.609	ENSCAPG00000013584	CMSS1	100	72.174	Cavia_aperea
ENSAMEG00000004092	CMSS1	100	86.873	ENSCPOG00000014680	CMSS1	92	86.873	Cavia_porcellus
ENSAMEG00000004092	CMSS1	100	90.000	ENSCCAG00000034685	CMSS1	99	90.000	Cebus_capucinus
ENSAMEG00000004092	CMSS1	100	89.575	ENSCATG00000031980	CMSS1	99	89.575	Cercocebus_atys
ENSAMEG00000004092	CMSS1	89	93.913	ENSCLAG00000011241	CMSS1	98	93.913	Chinchilla_lanigera
ENSAMEG00000004092	CMSS1	95	90.612	ENSCSAG00000006024	CMSS1	99	90.612	Chlorocebus_sabaeus
ENSAMEG00000004092	CMSS1	99	70.155	ENSCHOG00000012098	CMSS1	93	70.155	Choloepus_hoffmanni
ENSAMEG00000004092	CMSS1	76	39.801	ENSCING00000014848	-	100	40.957	Ciona_intestinalis
ENSAMEG00000004092	CMSS1	100	89.189	ENSCANG00000031337	CMSS1	99	89.189	Colobus_angolensis_palliatus
ENSAMEG00000004092	CMSS1	98	81.641	ENSCGRG00001014305	Cmss1	92	81.641	Cricetulus_griseus_chok1gshd
ENSAMEG00000004092	CMSS1	98	82.031	ENSCGRG00000006722	Cmss1	99	82.031	Cricetulus_griseus_crigri
ENSAMEG00000004092	CMSS1	78	62.562	ENSCSEG00000004958	cmss1	69	62.562	Cynoglossus_semilaevis
ENSAMEG00000004092	CMSS1	78	61.084	ENSCVAG00000005039	cmss1	88	55.118	Cyprinodon_variegatus
ENSAMEG00000004092	CMSS1	88	51.724	ENSDARG00000112579	cmss1	84	50.407	Danio_rerio
ENSAMEG00000004092	CMSS1	100	86.923	ENSDNOG00000040418	CMSS1	92	86.923	Dasypus_novemcinctus
ENSAMEG00000004092	CMSS1	100	87.645	ENSDORG00000010461	Cmss1	92	87.645	Dipodomys_ordii
ENSAMEG00000004092	CMSS1	51	50.376	ENSEBUG00000002156	-	96	50.376	Eptatretus_burgeri
ENSAMEG00000004092	CMSS1	100	83.846	ENSEASG00005010966	CMSS1	99	92.273	Equus_asinus_asinus
ENSAMEG00000004092	CMSS1	99	89.147	ENSECAG00000015662	CMSS1	99	91.189	Equus_caballus
ENSAMEG00000004092	CMSS1	67	89.535	ENSEEUG00000007624	-	62	89.535	Erinaceus_europaeus
ENSAMEG00000004092	CMSS1	93	58.091	ENSELUG00000019459	cmss1	80	58.091	Esox_lucius
ENSAMEG00000004092	CMSS1	100	94.208	ENSFCAG00000044577	CMSS1	92	94.208	Felis_catus
ENSAMEG00000004092	CMSS1	92	63.445	ENSFALG00000005816	CMSS1	97	64.783	Ficedula_albicollis
ENSAMEG00000004092	CMSS1	88	91.266	ENSFDAG00000012577	CMSS1	100	91.266	Fukomys_damarensis
ENSAMEG00000004092	CMSS1	88	60.776	ENSFHEG00000012008	cmss1	95	60.776	Fundulus_heteroclitus
ENSAMEG00000004092	CMSS1	78	62.069	ENSGMOG00000016729	cmss1	72	62.069	Gadus_morhua
ENSAMEG00000004092	CMSS1	100	63.359	ENSGALG00000015267	CMSS1	100	63.359	Gallus_gallus
ENSAMEG00000004092	CMSS1	82	61.792	ENSGAFG00000021217	cmss1	77	63.054	Gambusia_affinis
ENSAMEG00000004092	CMSS1	78	56.158	ENSGACG00000002798	cmss1	72	56.158	Gasterosteus_aculeatus
ENSAMEG00000004092	CMSS1	96	67.871	ENSGAGG00000019861	CMSS1	96	67.871	Gopherus_agassizii
ENSAMEG00000004092	CMSS1	100	89.575	ENSGGOG00000014125	CMSS1	99	89.575	Gorilla_gorilla
ENSAMEG00000004092	CMSS1	78	61.084	ENSHBUG00000008431	cmss1	71	61.084	Haplochromis_burtoni
ENSAMEG00000004092	CMSS1	98	87.008	ENSHGLG00000019481	CMSS1	100	87.008	Heterocephalus_glaber_female
ENSAMEG00000004092	CMSS1	99	86.822	ENSHGLG00100010314	CMSS1	100	86.822	Heterocephalus_glaber_male
ENSAMEG00000004092	CMSS1	85	63.636	ENSHCOG00000003222	cmss1	74	63.636	Hippocampus_comes
ENSAMEG00000004092	CMSS1	86	55.405	ENSIPUG00000011591	cmss1	76	55.405	Ictalurus_punctatus
ENSAMEG00000004092	CMSS1	100	90.734	ENSSTOG00000019366	CMSS1	92	90.734	Ictidomys_tridecemlineatus
ENSAMEG00000004092	CMSS1	99	86.434	ENSJJAG00000014894	Cmss1	90	91.626	Jaculus_jaculus
ENSAMEG00000004092	CMSS1	78	54.680	ENSKMAG00000002390	cmss1	81	54.680	Kryptolebias_marmoratus
ENSAMEG00000004092	CMSS1	78	58.333	ENSLBEG00000006298	cmss1	83	58.333	Labrus_bergylta
ENSAMEG00000004092	CMSS1	88	65.368	ENSLACG00000009293	CMSS1	100	65.368	Latimeria_chalumnae
ENSAMEG00000004092	CMSS1	88	57.895	ENSLOCG00000009391	cmss1	86	55.691	Lepisosteus_oculatus
ENSAMEG00000004092	CMSS1	88	91.266	ENSLAFG00000017509	CMSS1	100	91.266	Loxodonta_africana
ENSAMEG00000004092	CMSS1	100	89.961	ENSMFAG00000045006	CMSS1	99	89.961	Macaca_fascicularis
ENSAMEG00000004092	CMSS1	100	89.575	ENSMMUG00000002939	CMSS1	98	92.308	Macaca_mulatta
ENSAMEG00000004092	CMSS1	100	89.575	ENSMNEG00000031315	CMSS1	99	89.575	Macaca_nemestrina
ENSAMEG00000004092	CMSS1	100	89.189	ENSMLEG00000033660	CMSS1	99	89.189	Mandrillus_leucophaeus
ENSAMEG00000004092	CMSS1	78	63.054	ENSMAMG00000017176	cmss1	88	56.471	Mastacembelus_armatus
ENSAMEG00000004092	CMSS1	78	61.084	ENSMZEG00005021886	cmss1	83	55.967	Maylandia_zebra
ENSAMEG00000004092	CMSS1	88	67.249	ENSMGAG00000014360	CMSS1	100	67.249	Meleagris_gallopavo
ENSAMEG00000004092	CMSS1	99	57.977	ENSMAUG00000020609	Cmss1	90	57.977	Mesocricetus_auratus
ENSAMEG00000004092	CMSS1	100	89.575	ENSMICG00000048977	CMSS1	99	89.575	Microcebus_murinus
ENSAMEG00000004092	CMSS1	100	81.467	ENSMOCG00000021937	Cmss1	93	81.467	Microtus_ochrogaster
ENSAMEG00000004092	CMSS1	78	61.576	ENSMMOG00000019794	cmss1	84	61.576	Mola_mola
ENSAMEG00000004092	CMSS1	98	74.510	ENSMODG00000002275	CMSS1	95	74.510	Monodelphis_domestica
ENSAMEG00000004092	CMSS1	96	57.540	ENSMALG00000004250	cmss1	86	56.746	Monopterus_albus
ENSAMEG00000004092	CMSS1	100	80.769	MGP_CAROLIEiJ_G0020824	Cmss1	93	80.769	Mus_caroli
ENSAMEG00000004092	CMSS1	100	81.923	ENSMUSG00000022748	Cmss1	93	81.923	Mus_musculus
ENSAMEG00000004092	CMSS1	100	80.769	MGP_PahariEiJ_G0016524	Cmss1	93	80.769	Mus_pahari
ENSAMEG00000004092	CMSS1	100	81.538	MGP_SPRETEiJ_G0021724	Cmss1	93	81.538	Mus_spretus
ENSAMEG00000004092	CMSS1	99	94.961	ENSMPUG00000011324	CMSS1	99	94.961	Mustela_putorius_furo
ENSAMEG00000004092	CMSS1	100	90.038	ENSMLUG00000001131	CMSS1	99	90.038	Myotis_lucifugus
ENSAMEG00000004092	CMSS1	100	85.714	ENSNGAG00000020316	Cmss1	92	85.714	Nannospalax_galili
ENSAMEG00000004092	CMSS1	78	60.591	ENSNBRG00000003095	cmss1	83	55.967	Neolamprologus_brichardi
ENSAMEG00000004092	CMSS1	100	91.120	ENSNLEG00000034172	CMSS1	99	91.120	Nomascus_leucogenys
ENSAMEG00000004092	CMSS1	88	66.812	ENSMEUG00000014505	CMSS1	100	66.812	Notamacropus_eugenii
ENSAMEG00000004092	CMSS1	99	89.535	ENSOPRG00000002986	CMSS1	92	89.535	Ochotona_princeps
ENSAMEG00000004092	CMSS1	99	76.357	ENSODEG00000001853	-	92	76.357	Octodon_degus
ENSAMEG00000004092	CMSS1	99	83.658	ENSODEG00000003558	-	91	83.658	Octodon_degus
ENSAMEG00000004092	CMSS1	100	87.645	ENSODEG00000005226	-	92	87.645	Octodon_degus
ENSAMEG00000004092	CMSS1	99	72.093	ENSODEG00000009446	-	93	72.093	Octodon_degus
ENSAMEG00000004092	CMSS1	78	61.084	ENSONIG00000006678	cmss1	93	55.967	Oreochromis_niloticus
ENSAMEG00000004092	CMSS1	99	71.648	ENSOANG00000007529	CMSS1	100	74.359	Ornithorhynchus_anatinus
ENSAMEG00000004092	CMSS1	100	90.347	ENSOCUG00000025366	CMSS1	93	90.347	Oryctolagus_cuniculus
ENSAMEG00000004092	CMSS1	96	57.831	ENSORLG00000020340	cmss1	87	57.831	Oryzias_latipes
ENSAMEG00000004092	CMSS1	89	54.348	ENSORLG00020012235	cmss1	85	58.128	Oryzias_latipes_hni
ENSAMEG00000004092	CMSS1	78	57.143	ENSORLG00015015551	cmss1	75	57.635	Oryzias_latipes_hsok
ENSAMEG00000004092	CMSS1	78	64.039	ENSOMEG00000012555	cmss1	85	58.130	Oryzias_melastigma
ENSAMEG00000004092	CMSS1	88	92.576	ENSOGAG00000002045	CMSS1	100	92.576	Otolemur_garnettii
ENSAMEG00000004092	CMSS1	99	89.147	ENSOARG00000017899	CMSS1	89	89.147	Ovis_aries
ENSAMEG00000004092	CMSS1	100	90.347	ENSPPAG00000038515	CMSS1	95	90.347	Pan_paniscus
ENSAMEG00000004092	CMSS1	100	94.208	ENSPPRG00000016767	CMSS1	92	94.208	Panthera_pardus
ENSAMEG00000004092	CMSS1	100	93.822	ENSPTIG00000018274	CMSS1	92	93.822	Panthera_tigris_altaica
ENSAMEG00000004092	CMSS1	100	89.575	ENSPTRG00000015157	CMSS1	99	90.204	Pan_troglodytes
ENSAMEG00000004092	CMSS1	100	86.873	ENSPANG00000019980	CMSS1	99	86.873	Papio_anubis
ENSAMEG00000004092	CMSS1	88	61.039	ENSPKIG00000012609	cmss1	98	56.391	Paramormyrops_kingsleyae
ENSAMEG00000004092	CMSS1	89	71.739	ENSPSIG00000003849	CMSS1	100	71.739	Pelodiscus_sinensis
ENSAMEG00000004092	CMSS1	78	61.275	ENSPMGG00000010286	cmss1	87	61.275	Periophthalmus_magnuspinnatus
ENSAMEG00000004092	CMSS1	100	84.556	ENSPEMG00000016384	Cmss1	92	84.556	Peromyscus_maniculatus_bairdii
ENSAMEG00000004092	CMSS1	79	52.195	ENSPMAG00000001146	cmss1	99	52.709	Petromyzon_marinus
ENSAMEG00000004092	CMSS1	96	75.806	ENSPCIG00000015656	CMSS1	94	75.806	Phascolarctos_cinereus
ENSAMEG00000004092	CMSS1	78	62.562	ENSPFOG00000016849	cmss1	88	56.299	Poecilia_formosa
ENSAMEG00000004092	CMSS1	78	62.069	ENSPLAG00000008323	cmss1	88	55.906	Poecilia_latipinna
ENSAMEG00000004092	CMSS1	78	62.562	ENSPMEG00000021020	cmss1	88	56.299	Poecilia_mexicana
ENSAMEG00000004092	CMSS1	96	56.693	ENSPREG00000007618	cmss1	86	56.299	Poecilia_reticulata
ENSAMEG00000004092	CMSS1	100	89.189	ENSPPYG00000013606	CMSS1	95	89.189	Pongo_abelii
ENSAMEG00000004092	CMSS1	100	90.347	ENSPCOG00000020035	CMSS1	99	90.347	Propithecus_coquereli
ENSAMEG00000004092	CMSS1	100	78.378	ENSPVAG00000017031	CMSS1	92	78.378	Pteropus_vampyrus
ENSAMEG00000004092	CMSS1	68	62.712	ENSPNYG00000013428	cmss1	79	56.682	Pundamilia_nyererei
ENSAMEG00000004092	CMSS1	93	52.869	ENSPNAG00000007912	cmss1	82	52.869	Pygocentrus_nattereri
ENSAMEG00000004092	CMSS1	100	80.769	ENSRNOG00000027888	Cmss1	99	80.769	Rattus_norvegicus
ENSAMEG00000004092	CMSS1	100	88.417	ENSRBIG00000037931	CMSS1	99	88.417	Rhinopithecus_bieti
ENSAMEG00000004092	CMSS1	100	88.417	ENSRROG00000042910	CMSS1	99	88.417	Rhinopithecus_roxellana
ENSAMEG00000004092	CMSS1	100	88.846	ENSSBOG00000030980	CMSS1	99	88.846	Saimiri_boliviensis_boliviensis
ENSAMEG00000004092	CMSS1	96	73.810	ENSSHAG00000009321	CMSS1	99	73.810	Sarcophilus_harrisii
ENSAMEG00000004092	CMSS1	88	61.039	ENSSFOG00015001509	cmss1	87	58.730	Scleropages_formosus
ENSAMEG00000004092	CMSS1	78	63.547	ENSSMAG00000001653	cmss1	69	63.547	Scophthalmus_maximus
ENSAMEG00000004092	CMSS1	97	56.863	ENSSDUG00000007719	cmss1	88	57.255	Seriola_dumerili
ENSAMEG00000004092	CMSS1	80	63.462	ENSSLDG00000012300	cmss1	85	55.340	Seriola_lalandi_dorsalis
ENSAMEG00000004092	CMSS1	100	73.745	ENSSARG00000003584	CMSS1	92	73.745	Sorex_araneus
ENSAMEG00000004092	CMSS1	88	70.044	ENSSPUG00000003865	CMSS1	100	70.044	Sphenodon_punctatus
ENSAMEG00000004092	CMSS1	80	63.768	ENSSPAG00000019182	cmss1	63	64.039	Stegastes_partitus
ENSAMEG00000004092	CMSS1	100	91.892	ENSSSCG00000011970	CMSS1	92	91.892	Sus_scrofa
ENSAMEG00000004092	CMSS1	89	65.217	ENSTGUG00000013635	CMSS1	100	65.217	Taeniopygia_guttata
ENSAMEG00000004092	CMSS1	78	61.084	ENSTRUG00000015265	cmss1	72	61.084	Takifugu_rubripes
ENSAMEG00000004092	CMSS1	78	55.172	ENSTNIG00000002880	cmss1	95	47.909	Tetraodon_nigroviridis
ENSAMEG00000004092	CMSS1	88	69.869	ENSTBEG00000016722	CMSS1	81	69.869	Tupaia_belangeri
ENSAMEG00000004092	CMSS1	100	88.803	ENSTTRG00000001562	CMSS1	92	88.803	Tursiops_truncatus
ENSAMEG00000004092	CMSS1	100	97.683	ENSUAMG00000024209	CMSS1	100	98.661	Ursus_americanus
ENSAMEG00000004092	CMSS1	100	97.297	ENSUMAG00000001983	CMSS1	99	97.287	Ursus_maritimus
ENSAMEG00000004092	CMSS1	88	76.419	ENSVPAG00000000263	CMSS1	82	76.419	Vicugna_pacos
ENSAMEG00000004092	CMSS1	95	93.522	ENSVVUG00000021647	-	100	93.522	Vulpes_vulpes
ENSAMEG00000004092	CMSS1	87	92.511	ENSVVUG00000007776	-	89	92.511	Vulpes_vulpes
ENSAMEG00000004092	CMSS1	95	59.919	ENSXETG00000011858	cmss1	87	59.919	Xenopus_tropicalis
ENSAMEG00000004092	CMSS1	81	62.201	ENSXCOG00000018724	cmss1	69	62.562	Xiphophorus_couchianus
ENSAMEG00000004092	CMSS1	81	62.201	ENSXMAG00000011243	cmss1	76	62.562	Xiphophorus_maculatus