EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMEG00000004099 (Gene tree)
Gene ID
100483251
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Ailuropoda_melanoleuca
Status
putative
Strand
Plus strand
Length
17455 bases
Position
chrGL192531.1:1709239-1726693
Accession
15797
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMEP00000004343PABPPF00658.182.2e-2711
ENSAMEP00000004343RRM_5PF13893.64.3e-0711
ENSAMEP00000004343RRM_1PF00076.226.3e-8914
ENSAMEP00000004343RRM_1PF00076.226.3e-8924
ENSAMEP00000004343RRM_1PF00076.226.3e-8934
ENSAMEP00000004343RRM_1PF00076.226.3e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMET00000004515PABPC1L-2011914-ENSAMEP00000004343638 (aa)-G1LBR9
Gene Model
Click here to download ENSAMEG00000004099's gene model file
Pathways
Pathway IDPathway NameSource
aml03013RNA transportKEGG
aml03015mRNA surveillance pathwayKEGG
aml03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000004099's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMEG00000004099PABPC1L5331.707ENSAMEG00000016316HNRNPA05232.692
ENSAMEG00000004099PABPC1L10065.070ENSAMEG00000000348PABPC19764.451
ENSAMEG00000004099PABPC1L6040.278ENSAMEG00000010487ELAVL39234.940
ENSAMEG00000004099PABPC1L5230.534ENSAMEG00000007596CELF16430.534
ENSAMEG00000004099PABPC1L5130.769ENSAMEG00000004946CELF26330.769
ENSAMEG00000004099PABPC1L5960.955ENSAMEG00000020114PABPC59660.882
ENSAMEG00000004099PABPC1L9840.064ENSAMEG00000015083-6547.772
ENSAMEG00000004099PABPC1L5735.979ENSAMEG00000010073SF3B45435.979
ENSAMEG00000004099PABPC1L5871.574ENSAMEG00000019441-9971.574
ENSAMEG00000004099PABPC1L6141.667ENSAMEG00000017455ELAVL48141.667
ENSAMEG00000004099PABPC1L6136.145ENSAMEG00000007555ELAVL28536.145
ENSAMEG00000004099PABPC1L10065.023ENSAMEG00000011535-9864.823
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMEG00000004099PABPC1L10078.594ENSG00000101104PABPC1L9994.136Homo_sapiens
ENSAMEG00000004099PABPC1L9963.101ENSAPOG00000010842pabpc1l9862.946Acanthochromis_polyacanthus
ENSAMEG00000004099PABPC1L10064.110ENSACIG00000021004-9976.903Amphilophus_citrinellus
ENSAMEG00000004099PABPC1L10062.404ENSAOCG00000006167-9962.423Amphiprion_ocellaris
ENSAMEG00000004099PABPC1L10063.963ENSAPEG00000010558-9781.188Amphiprion_percula
ENSAMEG00000004099PABPC1L10065.116ENSATEG00000007428pabpc1l9965.367Anabas_testudineus
ENSAMEG00000004099PABPC1L9968.711ENSAPLG00000008415PABPC1L9968.692Anas_platyrhynchos
ENSAMEG00000004099PABPC1L9969.585ENSACAG00000011841PABPC1L9868.865Anolis_carolinensis
ENSAMEG00000004099PABPC1L10077.656ENSANAG00000026826PABPC1L9977.344Aotus_nancymaae
ENSAMEG00000004099PABPC1L10063.344ENSACLG00000024791pabpc1l9962.901Astatotilapia_calliptera
ENSAMEG00000004099PABPC1L10066.974ENSAMXG00000013552pabpc1l9965.805Astyanax_mexicanus
ENSAMEG00000004099PABPC1L5797.024ENSBTAG00000055300-10097.024Bos_taurus
ENSAMEG00000004099PABPC1L6677.027ENSBTAG00000016849PABPC1L7885.938Bos_taurus
ENSAMEG00000004099PABPC1L10077.812ENSCJAG00000017628PABPC1L9977.500Callithrix_jacchus
ENSAMEG00000004099PABPC1L5778.736ENSCJAG00000038506-10078.736Callithrix_jacchus
ENSAMEG00000004099PABPC1L10079.460ENSCAFG00000009573PABPC1L10078.924Canis_familiaris
ENSAMEG00000004099PABPC1L10081.522ENSCAFG00020013828PABPC1L9981.435Canis_lupus_dingo
ENSAMEG00000004099PABPC1L9978.673ENSCHIG00000025759PABPC1L9178.041Capra_hircus
ENSAMEG00000004099PABPC1L9974.194ENSTSYG00000006645PABPC1L9874.608Carlito_syrichta
ENSAMEG00000004099PABPC1L9968.027ENSCAPG00000014519PABPC1L9867.808Cavia_aperea
ENSAMEG00000004099PABPC1L10073.791ENSCPOG00000013633PABPC1L9973.023Cavia_porcellus
ENSAMEG00000004099PABPC1L10076.733ENSCCAG00000023338PABPC1L9977.188Cebus_capucinus
ENSAMEG00000004099PABPC1L10078.505ENSCATG00000034065PABPC1L9978.383Cercocebus_atys
ENSAMEG00000004099PABPC1L10071.799ENSCLAG00000005298PABPC1L9971.145Chinchilla_lanigera
ENSAMEG00000004099PABPC1L10078.193ENSCSAG00000014242PABPC1L9977.882Chlorocebus_sabaeus
ENSAMEG00000004099PABPC1L5281.061ENSCPBG00000007810-8381.061Chrysemys_picta_bellii
ENSAMEG00000004099PABPC1L6982.460ENSCPBG00000017755-9386.199Chrysemys_picta_bellii
ENSAMEG00000004099PABPC1L9846.809ENSCING00000002796-7466.346Ciona_intestinalis
ENSAMEG00000004099PABPC1L9956.875ENSCSAVG00000004246-8770.833Ciona_savignyi
ENSAMEG00000004099PABPC1L9954.574ENSCSAVG00000003102-10080.822Ciona_savignyi
ENSAMEG00000004099PABPC1L10074.387ENSCANG00000037530PABPC1L9974.114Colobus_angolensis_palliatus
ENSAMEG00000004099PABPC1L9969.111ENSCGRG00001021938Pabpc1l9867.901Cricetulus_griseus_chok1gshd
ENSAMEG00000004099PABPC1L9969.111ENSCGRG00000007946Pabpc1l9867.901Cricetulus_griseus_crigri
ENSAMEG00000004099PABPC1L9269.362ENSCSEG00000021295pabpc1l9775.181Cynoglossus_semilaevis
ENSAMEG00000004099PABPC1L10063.945ENSCVAG00000015943-9283.133Cyprinodon_variegatus
ENSAMEG00000004099PABPC1L10065.533ENSDARG00000002597pabpc1l8887.692Danio_rerio
ENSAMEG00000004099PABPC1L10078.281ENSDNOG00000048450PABPC1L9978.125Dasypus_novemcinctus
ENSAMEG00000004099PABPC1L10075.549ENSDORG00000001067Pabpc1l9975.274Dipodomys_ordii
ENSAMEG00000004099PABPC1L9391.057ENSETEG00000009969PABPC1L5791.057Echinops_telfairi
ENSAMEG00000004099PABPC1L5796.429ENSEASG00005023408-10096.429Equus_asinus_asinus
ENSAMEG00000004099PABPC1L5882.090ENSEASG00005023407-8171.008Equus_asinus_asinus
ENSAMEG00000004099PABPC1L6877.821ENSECAG00000040139-7192.929Equus_caballus
ENSAMEG00000004099PABPC1L10076.995ENSEEUG00000005978PABPC1L9976.406Erinaceus_europaeus
ENSAMEG00000004099PABPC1L10065.692ENSELUG00000001811pabpc1l9577.389Esox_lucius
ENSAMEG00000004099PABPC1L10082.031ENSFCAG00000011692PABPC1L9982.031Felis_catus
ENSAMEG00000004099PABPC1L6982.393ENSFALG00000005372PABPC1L7086.441Ficedula_albicollis
ENSAMEG00000004099PABPC1L8385.177ENSFDAG00000008291PABPC1L8588.915Fukomys_damarensis
ENSAMEG00000004099PABPC1L10064.961ENSFHEG00000003398pabpc1l9964.651Fundulus_heteroclitus
ENSAMEG00000004099PABPC1L10064.198ENSGMOG00000004437pabpc1l9864.198Gadus_morhua
ENSAMEG00000004099PABPC1L8083.333ENSGALG00000004123PABPC1L10085.273Gallus_gallus
ENSAMEG00000004099PABPC1L10061.257ENSGAFG00000021057pabpc1l9961.111Gambusia_affinis
ENSAMEG00000004099PABPC1L10062.634ENSGACG00000002792pabpc1l9963.190Gasterosteus_aculeatus
ENSAMEG00000004099PABPC1L10071.341ENSGAGG00000000589PABPC1L9086.232Gopherus_agassizii
ENSAMEG00000004099PABPC1L10078.594ENSGGOG00000004584PABPC1L9978.471Gorilla_gorilla
ENSAMEG00000004099PABPC1L10063.190ENSHBUG00000006134pabpc1l8976.627Haplochromis_burtoni
ENSAMEG00000004099PABPC1L10074.259ENSHGLG00000008434PABPC1L9974.259Heterocephalus_glaber_female
ENSAMEG00000004099PABPC1L5783.708ENSHGLG00100019506-10083.708Heterocephalus_glaber_male
ENSAMEG00000004099PABPC1L10074.259ENSHGLG00100012151PABPC1L9974.259Heterocephalus_glaber_male
ENSAMEG00000004099PABPC1L9962.761ENSHCOG00000009270pabpc1l8878.019Hippocampus_comes
ENSAMEG00000004099PABPC1L5760.920ENSIPUG00000006780-8560.920Ictalurus_punctatus
ENSAMEG00000004099PABPC1L5163.846ENSIPUG00000005537-10063.846Ictalurus_punctatus
ENSAMEG00000004099PABPC1L5760.345ENSIPUG00000006760-8860.345Ictalurus_punctatus
ENSAMEG00000004099PABPC1L10067.025ENSIPUG00000012602pabpc1l9680.387Ictalurus_punctatus
ENSAMEG00000004099PABPC1L10077.054ENSSTOG00000003739PABPC1L9977.054Ictidomys_tridecemlineatus
ENSAMEG00000004099PABPC1L9959.380ENSJJAG00000022406Pabpc1l9857.231Jaculus_jaculus
ENSAMEG00000004099PABPC1L10065.211ENSKMAG00000016847pabpc1l9964.899Kryptolebias_marmoratus
ENSAMEG00000004099PABPC1L10063.636ENSLBEG00000010084pabpc1l9963.422Labrus_bergylta
ENSAMEG00000004099PABPC1L10065.191ENSLACG00000005762PABPC1L9863.885Latimeria_chalumnae
ENSAMEG00000004099PABPC1L10066.822ENSLOCG00000007519pabpc1l9866.410Lepisosteus_oculatus
ENSAMEG00000004099PABPC1L10075.730ENSLAFG00000003553PABPC1L9975.730Loxodonta_africana
ENSAMEG00000004099PABPC1L10078.816ENSMFAG00000040365PABPC1L9978.505Macaca_fascicularis
ENSAMEG00000004099PABPC1L10077.259ENSMNEG00000032298PABPC1L9976.947Macaca_nemestrina
ENSAMEG00000004099PABPC1L10078.505ENSMLEG00000043139PABPC1L9978.383Mandrillus_leucophaeus
ENSAMEG00000004099PABPC1L9963.240ENSMAMG00000011854pabpc1l9863.651Mastacembelus_armatus
ENSAMEG00000004099PABPC1L10063.344ENSMZEG00005023713pabpc1l9962.901Maylandia_zebra
ENSAMEG00000004099PABPC1L10070.308ENSMGAG00000003674PABPC1L9869.160Meleagris_gallopavo
ENSAMEG00000004099PABPC1L9969.231ENSMOCG00000013186Pabpc1l9868.154Microtus_ochrogaster
ENSAMEG00000004099PABPC1L10064.119ENSMMOG00000020574-9087.692Mola_mola
ENSAMEG00000004099PABPC1L9572.431ENSMODG00000016198PABPC1L9972.698Monodelphis_domestica
ENSAMEG00000004099PABPC1L9861.994ENSMALG00000021622pabpc1l10062.715Monopterus_albus
ENSAMEG00000004099PABPC1L9969.749MGP_CAROLIEiJ_G0024627Pabpc1l9968.837Mus_caroli
ENSAMEG00000004099PABPC1L9969.592ENSMUSG00000054582Pabpc1l9968.837Mus_musculus
ENSAMEG00000004099PABPC1L9969.953MGP_PahariEiJ_G0026071Pabpc1l9968.308Mus_pahari
ENSAMEG00000004099PABPC1L9969.749MGP_SPRETEiJ_G0025549Pabpc1l9968.837Mus_spretus
ENSAMEG00000004099PABPC1L10081.591ENSMPUG00000017646PABPC1L9981.591Mustela_putorius_furo
ENSAMEG00000004099PABPC1L9975.469ENSMLUG00000006324PABPC1L9773.733Myotis_lucifugus
ENSAMEG00000004099PABPC1L10070.607ENSNGAG00000010458Pabpc1l9969.538Nannospalax_galili
ENSAMEG00000004099PABPC1L10063.509ENSNBRG00000016633pabpc1l9877.108Neolamprologus_brichardi
ENSAMEG00000004099PABPC1L7179.470ENSMEUG00000007905-6785.472Notamacropus_eugenii
ENSAMEG00000004099PABPC1L10076.791ENSOPRG00000011846PABPC1L9975.975Ochotona_princeps
ENSAMEG00000004099PABPC1L7990.073ENSODEG00000015482PABPC1L8890.073Octodon_degus
ENSAMEG00000004099PABPC1L5676.875ENSODEG00000002920-9776.875Octodon_degus
ENSAMEG00000004099PABPC1L10063.093ENSONIG00000017314pabpc1l9962.634Oreochromis_niloticus
ENSAMEG00000004099PABPC1L9161.905ENSOANG00000015793-10060.637Ornithorhynchus_anatinus
ENSAMEG00000004099PABPC1L10070.677ENSOCUG00000003005PABPC1L9971.299Oryctolagus_cuniculus
ENSAMEG00000004099PABPC1L10063.863ENSORLG00000010322pabpc1l9378.205Oryzias_latipes
ENSAMEG00000004099PABPC1L10063.707ENSORLG00020021193pabpc1l9378.205Oryzias_latipes_hni
ENSAMEG00000004099PABPC1L9963.807ENSORLG00015017018pabpc1l9377.922Oryzias_latipes_hsok
ENSAMEG00000004099PABPC1L10060.619ENSOMEG00000010789pabpc1l9960.530Oryzias_melastigma
ENSAMEG00000004099PABPC1L10075.115ENSOGAG00000032999PABPC1L9975.000Otolemur_garnettii
ENSAMEG00000004099PABPC1L10080.408ENSOARG00000004578PABPC1L9978.891Ovis_aries
ENSAMEG00000004099PABPC1L10078.438ENSPPAG00000039677PABPC1L9978.125Pan_paniscus
ENSAMEG00000004099PABPC1L6183.642ENSPPRG00000019327-9883.642Panthera_pardus
ENSAMEG00000004099PABPC1L9981.861ENSPTIG00000006524PABPC1L9981.861Panthera_tigris_altaica
ENSAMEG00000004099PABPC1L6193.827ENSPTRG00000013531PABPC1L9993.827Pan_troglodytes
ENSAMEG00000004099PABPC1L10078.505ENSPANG00000018788PABPC1L9978.383Papio_anubis
ENSAMEG00000004099PABPC1L10066.102ENSPKIG00000007322pabpc1l9965.891Paramormyrops_kingsleyae
ENSAMEG00000004099PABPC1L5184.733ENSPKIG00000016810-9384.733Paramormyrops_kingsleyae
ENSAMEG00000004099PABPC1L6684.524ENSPSIG00000013289PABPC1L9984.524Pelodiscus_sinensis
ENSAMEG00000004099PABPC1L6186.364ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSAMEG00000004099PABPC1L6575.148ENSPMGG00000023121-8075.148Periophthalmus_magnuspinnatus
ENSAMEG00000004099PABPC1L9968.603ENSPEMG00000020671Pabpc1l9868.837Peromyscus_maniculatus_bairdii
ENSAMEG00000004099PABPC1L10065.523ENSPFOG00000013241pabpc1l9964.417Poecilia_formosa
ENSAMEG00000004099PABPC1L5188.462ENSPLAG00000023686-9288.462Poecilia_latipinna
ENSAMEG00000004099PABPC1L10064.571ENSPLAG00000017490-8980.682Poecilia_latipinna
ENSAMEG00000004099PABPC1L10063.748ENSPMEG00000007677pabpc1l9964.462Poecilia_mexicana
ENSAMEG00000004099PABPC1L5188.462ENSPMEG00000009185-8888.462Poecilia_mexicana
ENSAMEG00000004099PABPC1L6577.536ENSPREG00000015886pabpc1l10077.536Poecilia_reticulata
ENSAMEG00000004099PABPC1L10078.750ENSPPYG00000011042PABPC1L9978.438Pongo_abelii
ENSAMEG00000004099PABPC1L6195.312ENSPCAG00000011787-7595.312Procavia_capensis
ENSAMEG00000004099PABPC1L10075.862ENSPCOG00000020630PABPC1L9975.507Propithecus_coquereli
ENSAMEG00000004099PABPC1L10077.245ENSPVAG00000012663PABPC1L9977.344Pteropus_vampyrus
ENSAMEG00000004099PABPC1L10061.934ENSPNYG00000004101pabpc1l9877.108Pundamilia_nyererei
ENSAMEG00000004099PABPC1L10060.433ENSPNAG00000021248pabpc1l9960.433Pygocentrus_nattereri
ENSAMEG00000004099PABPC1L10068.495ENSRNOG00000012750Pabpc1l9968.576Rattus_norvegicus
ENSAMEG00000004099PABPC1L10078.438ENSRBIG00000035381PABPC1L9978.125Rhinopithecus_bieti
ENSAMEG00000004099PABPC1L10078.281ENSRROG00000044498PABPC1L9977.969Rhinopithecus_roxellana
ENSAMEG00000004099PABPC1L10077.656ENSSBOG00000009532-9977.344Saimiri_boliviensis_boliviensis
ENSAMEG00000004099PABPC1L9865.370ENSSHAG00000011446PABPC1L9965.049Sarcophilus_harrisii
ENSAMEG00000004099PABPC1L10066.306ENSSFOG00015017304pabpc1l9966.149Scleropages_formosus
ENSAMEG00000004099PABPC1L9964.297ENSSMAG00000010516pabpc1l9387.597Scophthalmus_maximus
ENSAMEG00000004099PABPC1L10064.319ENSSDUG00000014743pabpc1l9964.877Seriola_dumerili
ENSAMEG00000004099PABPC1L9863.535ENSSLDG00000006981pabpc1l9878.995Seriola_lalandi_dorsalis
ENSAMEG00000004099PABPC1L9968.934ENSSPUG00000004233PABPC1L9867.982Sphenodon_punctatus
ENSAMEG00000004099PABPC1L8279.012ENSSPAG00000017137pabpc1l9075.000Stegastes_partitus
ENSAMEG00000004099PABPC1L10079.348ENSSSCG00000007382PABPC1L9978.154Sus_scrofa
ENSAMEG00000004099PABPC1L10067.922ENSTGUG00000005114PABPC1L9967.771Taeniopygia_guttata
ENSAMEG00000004099PABPC1L9863.208ENSTRUG00000011085pabpc1l9763.108Takifugu_rubripes
ENSAMEG00000004099PABPC1L9961.574ENSTNIG00000017903pabpc1l9861.728Tetraodon_nigroviridis
ENSAMEG00000004099PABPC1L7994.178ENSTBEG00000002851PABPC1L6694.178Tupaia_belangeri
ENSAMEG00000004099PABPC1L9577.997ENSTTRG00000007618PABPC1L10076.814Tursiops_truncatus
ENSAMEG00000004099PABPC1L10080.655ENSUAMG00000017682PABPC1L9880.251Ursus_americanus
ENSAMEG00000004099PABPC1L6597.003ENSUMAG00000025436PABPC1L9497.003Ursus_maritimus
ENSAMEG00000004099PABPC1L9996.443ENSVVUG00000018939PABPC1L9896.443Vulpes_vulpes
ENSAMEG00000004099PABPC1L10065.741ENSXETG00000022831pabpc1l9865.432Xenopus_tropicalis
ENSAMEG00000004099PABPC1L10064.961ENSXCOG00000005459pabpc1l9983.688Xiphophorus_couchianus
ENSAMEG00000004099PABPC1L8779.545ENSXMAG00000017135pabpc1l8979.545Xiphophorus_maculatus

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