EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000004195 (Gene tree)
Gene ID: 100470002
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 4924 bases
Position: chrGL192497.1:317863-322786
Accession: 31111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000004442	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000004622	ARL5C-201	543	-	ENSAMEP00000004442	180 (aa)	-	G1LC18

Gene Model

Click here to download ENSAMEG00000004195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000004195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000004195	ARL5C	87	40.741	ENSAMEG00000019250	ARL4A	81	40.741
ENSAMEG00000004195	ARL5C	97	73.864	ENSAMEG00000012973	ARL5B	97	73.864
ENSAMEG00000004195	ARL5C	97	44.886	ENSAMEG00000007042	-	97	44.886
ENSAMEG00000004195	ARL5C	83	42.667	ENSAMEG00000017738	-	79	42.667
ENSAMEG00000004195	ARL5C	94	39.205	ENSAMEG00000013671	ARL6	97	39.205
ENSAMEG00000004195	ARL5C	92	43.030	ENSAMEG00000018754	-	91	43.030
ENSAMEG00000004195	ARL5C	97	69.143	ENSAMEG00000008735	ARL5A	98	69.143
ENSAMEG00000004195	ARL5C	96	43.353	ENSAMEG00000004635	ARF5	96	43.353
ENSAMEG00000004195	ARL5C	88	45.570	ENSAMEG00000016452	ARL1	90	45.679
ENSAMEG00000004195	ARL5C	97	42.614	ENSAMEG00000011813	ARF4	98	42.614
ENSAMEG00000004195	ARL5C	94	39.888	ENSAMEG00000016052	ARL4C	72	39.888
ENSAMEG00000004195	ARL5C	92	35.882	ENSAMEG00000002767	ARL11	90	35.882
ENSAMEG00000004195	ARL5C	86	36.250	ENSAMEG00000019914	ARL4D	80	36.250
ENSAMEG00000004195	ARL5C	92	43.030	ENSAMEG00000017816	-	86	44.025
ENSAMEG00000004195	ARL5C	90	34.884	ENSAMEG00000001741	ARFRP1	86	34.884
ENSAMEG00000004195	ARL5C	97	46.591	ENSAMEG00000016301	ARF1	97	46.591
ENSAMEG00000004195	ARL5C	87	39.873	ENSAMEG00000019231	ARL14	82	39.873
ENSAMEG00000004195	ARL5C	97	45.455	ENSAMEG00000004184	-	97	45.455
ENSAMEG00000004195	ARL5C	73	30.827	ENSAMEG00000006984	ARL10	54	30.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000004195	ARL5C	99	77.528	ENSACAG00000003879	-	99	77.528	Anolis_carolinensis
ENSAMEG00000004195	ARL5C	99	91.061	ENSCAFG00000016525	ARL5C	100	91.061	Canis_familiaris
ENSAMEG00000004195	ARL5C	99	85.475	ENSCHIG00000008208	ARL5C	100	85.475	Capra_hircus
ENSAMEG00000004195	ARL5C	59	81.132	ENSCHOG00000013232	-	100	81.132	Choloepus_hoffmanni
ENSAMEG00000004195	ARL5C	98	76.836	ENSCGRG00001000695	Arl5c	99	76.836	Cricetulus_griseus_chok1gshd
ENSAMEG00000004195	ARL5C	98	77.401	ENSCGRG00000007376	Arl5c	99	77.401	Cricetulus_griseus_crigri
ENSAMEG00000004195	ARL5C	99	85.475	ENSDNOG00000019741	ARL5C	100	85.475	Dasypus_novemcinctus
ENSAMEG00000004195	ARL5C	99	85.393	ENSDORG00000016304	Arl5c	99	85.393	Dipodomys_ordii
ENSAMEG00000004195	ARL5C	91	86.585	ENSEASG00005001922	ARL5C	76	86.585	Equus_asinus_asinus
ENSAMEG00000004195	ARL5C	99	87.709	ENSECAG00000009024	ARL5C	100	87.709	Equus_caballus
ENSAMEG00000004195	ARL5C	99	89.385	ENSFCAG00000009962	ARL5C	100	89.385	Felis_catus
ENSAMEG00000004195	ARL5C	99	87.709	ENSSTOG00000011104	ARL5C	100	87.709	Ictidomys_tridecemlineatus
ENSAMEG00000004195	ARL5C	99	75.978	ENSLACG00000015332	ARL5C	100	75.978	Latimeria_chalumnae
ENSAMEG00000004195	ARL5C	100	87.222	ENSLAFG00000018248	ARL5C	100	87.222	Loxodonta_africana
ENSAMEG00000004195	ARL5C	98	75.141	ENSMAUG00000012845	Arl5c	87	75.141	Mesocricetus_auratus
ENSAMEG00000004195	ARL5C	99	87.709	ENSMICG00000002661	ARL5C	100	87.709	Microcebus_murinus
ENSAMEG00000004195	ARL5C	99	73.184	ENSMOCG00000000234	Arl5c	100	73.184	Microtus_ochrogaster
ENSAMEG00000004195	ARL5C	99	84.916	MGP_CAROLIEiJ_G0017071	Arl5c	100	84.916	Mus_caroli
ENSAMEG00000004195	ARL5C	99	84.358	ENSMUSG00000038352	Arl5c	100	84.358	Mus_musculus
ENSAMEG00000004195	ARL5C	99	84.916	MGP_PahariEiJ_G0018200	Arl5c	100	84.916	Mus_pahari
ENSAMEG00000004195	ARL5C	99	84.358	MGP_SPRETEiJ_G0017917	Arl5c	100	84.358	Mus_spretus
ENSAMEG00000004195	ARL5C	100	86.111	ENSMLUG00000030149	ARL5C	100	86.111	Myotis_lucifugus
ENSAMEG00000004195	ARL5C	99	84.358	ENSOGAG00000005894	ARL5C	100	84.358	Otolemur_garnettii
ENSAMEG00000004195	ARL5C	100	86.111	ENSOARG00000010377	ARL5C	100	86.111	Ovis_aries
ENSAMEG00000004195	ARL5C	99	90.503	ENSPPRG00000000975	ARL5C	100	90.503	Panthera_pardus
ENSAMEG00000004195	ARL5C	99	89.385	ENSPTIG00000017487	ARL5C	100	89.385	Panthera_tigris_altaica
ENSAMEG00000004195	ARL5C	98	83.616	ENSPEMG00000008932	Arl5c	99	83.616	Peromyscus_maniculatus_bairdii
ENSAMEG00000004195	ARL5C	99	88.268	ENSPCOG00000028489	ARL5C	100	88.268	Propithecus_coquereli
ENSAMEG00000004195	ARL5C	94	87.574	ENSPVAG00000008495	ARL5C	99	87.574	Pteropus_vampyrus
ENSAMEG00000004195	ARL5C	99	82.682	ENSRNOG00000036880	Arl5c	100	82.682	Rattus_norvegicus
ENSAMEG00000004195	ARL5C	98	69.318	ENSSBOG00000021022	ARL5C	100	69.318	Saimiri_boliviensis_boliviensis
ENSAMEG00000004195	ARL5C	95	79.532	ENSSPUG00000007555	ARL5C	100	80.982	Sphenodon_punctatus
ENSAMEG00000004195	ARL5C	99	86.034	ENSTBEG00000007274	ARL5C	100	86.034	Tupaia_belangeri
ENSAMEG00000004195	ARL5C	99	93.855	ENSUAMG00000012299	ARL5C	100	93.855	Ursus_americanus
ENSAMEG00000004195	ARL5C	99	94.413	ENSUMAG00000017197	ARL5C	100	94.413	Ursus_maritimus
ENSAMEG00000004195	ARL5C	99	73.184	ENSXETG00000023713	arl5c	92	73.184	Xenopus_tropicalis