EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000004562 (Gene tree)
Gene ID: 105238519
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 9217 bases
Position: chrGL192818.1:643347-652563
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000004805	MBD	PF01429.19	3.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000004998	MBD4-201	1710	-	ENSAMEP00000004805	569 (aa)	-	G1LD24

Gene Model

Click here to download ENSAMEG00000004562's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000004562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000004562	MBD4	99	77.893	ENSG00000129071	MBD4	99	77.893	Homo_sapiens
ENSAMEG00000004562	MBD4	85	43.699	ENSAPEG00000016131	mbd4	95	43.699	Amphiprion_percula
ENSAMEG00000004562	MBD4	99	72.389	ENSBTAG00000021645	MBD4	100	72.389	Bos_taurus
ENSAMEG00000004562	MBD4	99	75.880	ENSCJAG00000017293	MBD4	99	75.880	Callithrix_jacchus
ENSAMEG00000004562	MBD4	99	87.719	ENSCAFG00000004867	MBD4	100	87.719	Canis_familiaris
ENSAMEG00000004562	MBD4	99	87.719	ENSCAFG00020007082	MBD4	100	87.719	Canis_lupus_dingo
ENSAMEG00000004562	MBD4	99	72.389	ENSCHIG00000009760	MBD4	100	72.389	Capra_hircus
ENSAMEG00000004562	MBD4	99	75.433	ENSCCAG00000029796	MBD4	99	75.433	Cebus_capucinus
ENSAMEG00000004562	MBD4	99	76.083	ENSCATG00000035211	MBD4	99	76.083	Cercocebus_atys
ENSAMEG00000004562	MBD4	99	68.761	ENSCLAG00000008974	MBD4	100	68.761	Chinchilla_lanigera
ENSAMEG00000004562	MBD4	99	75.563	ENSCSAG00000009037	MBD4	99	75.563	Chlorocebus_sabaeus
ENSAMEG00000004562	MBD4	86	51.172	ENSCPBG00000014704	MBD4	89	51.172	Chrysemys_picta_bellii
ENSAMEG00000004562	MBD4	99	76.083	ENSCANG00000007120	MBD4	99	76.083	Colobus_angolensis_palliatus
ENSAMEG00000004562	MBD4	99	65.845	ENSCGRG00001003507	Mbd4	100	66.373	Cricetulus_griseus_chok1gshd
ENSAMEG00000004562	MBD4	99	65.845	ENSCGRG00000010974	Mbd4	100	66.373	Cricetulus_griseus_crigri
ENSAMEG00000004562	MBD4	99	75.916	ENSDNOG00000049619	MBD4	100	75.916	Dasypus_novemcinctus
ENSAMEG00000004562	MBD4	80	63.090	ENSDORG00000000902	-	98	62.213	Dipodomys_ordii
ENSAMEG00000004562	MBD4	99	80.245	ENSEASG00005014800	MBD4	100	80.245	Equus_asinus_asinus
ENSAMEG00000004562	MBD4	99	80.594	ENSECAG00000022106	MBD4	100	80.594	Equus_caballus
ENSAMEG00000004562	MBD4	88	66.797	ENSEEUG00000011459	MBD4	95	66.797	Erinaceus_europaeus
ENSAMEG00000004562	MBD4	100	85.464	ENSFCAG00000000083	MBD4	100	85.464	Felis_catus
ENSAMEG00000004562	MBD4	81	44.798	ENSFALG00000013663	MBD4	99	44.969	Ficedula_albicollis
ENSAMEG00000004562	MBD4	85	41.683	ENSGMOG00000013830	mbd4	100	41.683	Gadus_morhua
ENSAMEG00000004562	MBD4	88	50.484	ENSGAGG00000018644	MBD4	91	50.484	Gopherus_agassizii
ENSAMEG00000004562	MBD4	99	76.684	ENSGGOG00000010698	MBD4	99	76.684	Gorilla_gorilla
ENSAMEG00000004562	MBD4	99	70.681	ENSHGLG00000009034	MBD4	100	70.681	Heterocephalus_glaber_female
ENSAMEG00000004562	MBD4	99	70.855	ENSHGLG00100000135	MBD4	100	70.855	Heterocephalus_glaber_male
ENSAMEG00000004562	MBD4	99	72.300	ENSSTOG00000020663	MBD4	100	72.300	Ictidomys_tridecemlineatus
ENSAMEG00000004562	MBD4	99	74.826	ENSLAFG00000010609	MBD4	99	74.826	Loxodonta_africana
ENSAMEG00000004562	MBD4	99	75.563	ENSMFAG00000002266	MBD4	99	75.563	Macaca_fascicularis
ENSAMEG00000004562	MBD4	99	74.957	ENSMMUG00000012723	MBD4	99	74.957	Macaca_mulatta
ENSAMEG00000004562	MBD4	96	74.322	ENSMNEG00000029752	MBD4	99	74.322	Macaca_nemestrina
ENSAMEG00000004562	MBD4	99	75.563	ENSMLEG00000024859	MBD4	99	75.563	Mandrillus_leucophaeus
ENSAMEG00000004562	MBD4	99	77.470	ENSMICG00000008022	MBD4	99	77.470	Microcebus_murinus
ENSAMEG00000004562	MBD4	66	48.413	ENSMOCG00000002466	-	95	48.413	Microtus_ochrogaster
ENSAMEG00000004562	MBD4	86	60.721	ENSMODG00000006399	-	99	60.721	Monodelphis_domestica
ENSAMEG00000004562	MBD4	99	66.261	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.261	Mus_caroli
ENSAMEG00000004562	MBD4	99	65.565	ENSMUSG00000030322	Mbd4	100	65.565	Mus_musculus
ENSAMEG00000004562	MBD4	99	66.435	MGP_PahariEiJ_G0022511	-	100	66.435	Mus_pahari
ENSAMEG00000004562	MBD4	99	65.217	MGP_SPRETEiJ_G0029788	Mbd4	100	65.217	Mus_spretus
ENSAMEG00000004562	MBD4	99	86.995	ENSMPUG00000017195	MBD4	100	86.995	Mustela_putorius_furo
ENSAMEG00000004562	MBD4	94	82.234	ENSMLUG00000014766	MBD4	99	82.234	Myotis_lucifugus
ENSAMEG00000004562	MBD4	99	77.296	ENSNLEG00000005337	MBD4	99	77.296	Nomascus_leucogenys
ENSAMEG00000004562	MBD4	100	62.867	ENSOPRG00000000473	MBD4	100	62.867	Ochotona_princeps
ENSAMEG00000004562	MBD4	70	44.203	ENSOANG00000004589	-	97	43.357	Ornithorhynchus_anatinus
ENSAMEG00000004562	MBD4	99	66.437	ENSOCUG00000013006	MBD4	100	66.437	Oryctolagus_cuniculus
ENSAMEG00000004562	MBD4	99	71.553	ENSOGAG00000010236	MBD4	100	71.553	Otolemur_garnettii
ENSAMEG00000004562	MBD4	99	72.743	ENSOARG00000014699	MBD4	100	72.743	Ovis_aries
ENSAMEG00000004562	MBD4	99	77.202	ENSPPAG00000036528	MBD4	99	77.202	Pan_paniscus
ENSAMEG00000004562	MBD4	100	84.238	ENSPPRG00000016480	MBD4	100	84.238	Panthera_pardus
ENSAMEG00000004562	MBD4	99	77.375	ENSPTRG00000015377	MBD4	99	77.375	Pan_troglodytes
ENSAMEG00000004562	MBD4	99	76.083	ENSPANG00000015047	MBD4	99	76.083	Papio_anubis
ENSAMEG00000004562	MBD4	90	49.907	ENSPSIG00000007892	MBD4	91	49.907	Pelodiscus_sinensis
ENSAMEG00000004562	MBD4	93	58.226	ENSPEMG00000006226	Mbd4	99	58.410	Peromyscus_maniculatus_bairdii
ENSAMEG00000004562	MBD4	89	58.960	ENSPCIG00000002276	-	98	58.960	Phascolarctos_cinereus
ENSAMEG00000004562	MBD4	99	77.163	ENSPPYG00000013417	MBD4	99	77.163	Pongo_abelii
ENSAMEG00000004562	MBD4	95	71.377	ENSPCAG00000012915	MBD4	99	71.377	Procavia_capensis
ENSAMEG00000004562	MBD4	100	80.969	ENSPVAG00000005238	MBD4	100	80.969	Pteropus_vampyrus
ENSAMEG00000004562	MBD4	99	65.338	ENSRNOG00000010919	Mbd4	100	65.739	Rattus_norvegicus
ENSAMEG00000004562	MBD4	99	76.430	ENSRBIG00000027722	MBD4	99	76.430	Rhinopithecus_bieti
ENSAMEG00000004562	MBD4	99	76.256	ENSRROG00000029136	MBD4	99	76.256	Rhinopithecus_roxellana
ENSAMEG00000004562	MBD4	99	75.610	ENSSBOG00000016810	MBD4	99	75.610	Saimiri_boliviensis_boliviensis
ENSAMEG00000004562	MBD4	98	56.106	ENSSHAG00000012953	MBD4	99	56.106	Sarcophilus_harrisii
ENSAMEG00000004562	MBD4	80	62.099	ENSSARG00000004496	-	80	62.099	Sorex_araneus
ENSAMEG00000004562	MBD4	86	52.446	ENSSPUG00000017344	MBD4	91	52.446	Sphenodon_punctatus
ENSAMEG00000004562	MBD4	99	77.487	ENSSSCG00000033303	MBD4	100	77.487	Sus_scrofa
ENSAMEG00000004562	MBD4	85	40.200	ENSTNIG00000017927	mbd4	100	40.200	Tetraodon_nigroviridis
ENSAMEG00000004562	MBD4	87	62.385	ENSTBEG00000003041	-	87	62.385	Tupaia_belangeri
ENSAMEG00000004562	MBD4	95	79.710	ENSTTRG00000011265	MBD4	99	79.710	Tursiops_truncatus
ENSAMEG00000004562	MBD4	86	96.334	ENSUAMG00000000814	MBD4	100	96.334	Ursus_americanus
ENSAMEG00000004562	MBD4	99	94.159	ENSUMAG00000017542	MBD4	100	94.159	Ursus_maritimus
ENSAMEG00000004562	MBD4	65	68.493	ENSVPAG00000004040	-	68	68.493	Vicugna_pacos
ENSAMEG00000004562	MBD4	99	87.018	ENSVVUG00000014222	MBD4	100	87.018	Vulpes_vulpes