EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000004605 (Gene tree)
Gene ID: 100475841
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 6833 bases
Position: chrGL194155.1:220712-227544
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000004842	Gar1	PF04410.14	2.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000005037	GAR1-201	612	-	ENSAMEP00000004842	204 (aa)	-	G1LD61

Gene Model

Click here to download ENSAMEG00000004605's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000004605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000004605	GAR1	53	98.165	ENSG00000109534	GAR1	50	98.165	Homo_sapiens
ENSAMEG00000004605	GAR1	52	93.458	ENSAPOG00000019754	gar1	50	93.458	Acanthochromis_polyacanthus
ENSAMEG00000004605	GAR1	52	93.458	ENSAOCG00000020947	gar1	50	93.458	Amphiprion_ocellaris
ENSAMEG00000004605	GAR1	52	93.458	ENSAPEG00000001676	gar1	50	93.458	Amphiprion_percula
ENSAMEG00000004605	GAR1	52	93.458	ENSATEG00000003733	gar1	50	93.458	Anabas_testudineus
ENSAMEG00000004605	GAR1	52	88.679	ENSAPLG00000010926	GAR1	60	87.963	Anas_platyrhynchos
ENSAMEG00000004605	GAR1	52	90.566	ENSACAG00000010031	GAR1	51	89.815	Anolis_carolinensis
ENSAMEG00000004605	GAR1	53	98.165	ENSANAG00000021608	GAR1	50	98.165	Aotus_nancymaae
ENSAMEG00000004605	GAR1	54	87.273	ENSAMXG00000015752	gar1	66	84.167	Astyanax_mexicanus
ENSAMEG00000004605	GAR1	53	98.165	ENSBTAG00000000748	GAR1	52	98.165	Bos_taurus
ENSAMEG00000004605	GAR1	53	98.165	ENSCJAG00000004041	GAR1	50	98.165	Callithrix_jacchus
ENSAMEG00000004605	GAR1	72	92.517	ENSCAFG00000011503	GAR1	60	92.517	Canis_familiaris
ENSAMEG00000004605	GAR1	89	97.826	ENSCAFG00020015566	GAR1	96	97.826	Canis_lupus_dingo
ENSAMEG00000004605	GAR1	63	87.597	ENSCHIG00000011049	-	55	85.321	Capra_hircus
ENSAMEG00000004605	GAR1	54	98.182	ENSCHIG00000016026	-	97	96.154	Capra_hircus
ENSAMEG00000004605	GAR1	53	98.165	ENSTSYG00000013668	-	51	98.165	Carlito_syrichta
ENSAMEG00000004605	GAR1	70	76.224	ENSTSYG00000026632	-	56	89.908	Carlito_syrichta
ENSAMEG00000004605	GAR1	54	98.182	ENSCPOG00000004216	GAR1	50	98.165	Cavia_porcellus
ENSAMEG00000004605	GAR1	53	98.165	ENSCCAG00000029372	GAR1	50	98.165	Cebus_capucinus
ENSAMEG00000004605	GAR1	54	98.182	ENSCATG00000021854	GAR1	55	98.165	Cercocebus_atys
ENSAMEG00000004605	GAR1	54	96.364	ENSCLAG00000005335	GAR1	96	94.937	Chinchilla_lanigera
ENSAMEG00000004605	GAR1	52	98.131	ENSCSAG00000003922	GAR1	55	98.165	Chlorocebus_sabaeus
ENSAMEG00000004605	GAR1	55	95.690	ENSCHOG00000007484	-	51	95.690	Choloepus_hoffmanni
ENSAMEG00000004605	GAR1	52	91.509	ENSCPBG00000004310	GAR1	69	77.372	Chrysemys_picta_bellii
ENSAMEG00000004605	GAR1	54	97.273	ENSCANG00000039262	GAR1	50	97.248	Colobus_angolensis_palliatus
ENSAMEG00000004605	GAR1	52	94.340	ENSCGRG00000010165	-	72	96.739	Cricetulus_griseus_crigri
ENSAMEG00000004605	GAR1	52	92.523	ENSCVAG00000002103	gar1	51	92.523	Cyprinodon_variegatus
ENSAMEG00000004605	GAR1	52	90.654	ENSDARG00000076526	gar1	50	89.381	Danio_rerio
ENSAMEG00000004605	GAR1	53	97.248	ENSDNOG00000037632	GAR1	55	97.248	Dasypus_novemcinctus
ENSAMEG00000004605	GAR1	54	96.396	ENSDORG00000000482	Gar1	50	96.330	Dipodomys_ordii
ENSAMEG00000004605	GAR1	54	98.182	ENSEASG00005004658	GAR1	50	98.165	Equus_asinus_asinus
ENSAMEG00000004605	GAR1	54	99.091	ENSECAG00000013624	GAR1	97	96.190	Equus_caballus
ENSAMEG00000004605	GAR1	100	98.058	ENSFCAG00000040791	-	99	98.058	Felis_catus
ENSAMEG00000004605	GAR1	68	57.971	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSAMEG00000004605	GAR1	52	91.509	ENSFALG00000006445	GAR1	50	90.741	Ficedula_albicollis
ENSAMEG00000004605	GAR1	54	90.090	ENSFHEG00000008068	gar1	68	80.137	Fundulus_heteroclitus
ENSAMEG00000004605	GAR1	51	92.308	ENSGAGG00000004393	GAR1	55	90.654	Gopherus_agassizii
ENSAMEG00000004605	GAR1	53	97.248	ENSGGOG00000008681	GAR1	50	97.248	Gorilla_gorilla
ENSAMEG00000004605	GAR1	54	79.279	ENSGGOG00000036205	-	54	79.817	Gorilla_gorilla
ENSAMEG00000004605	GAR1	52	98.131	ENSHGLG00000000493	GAR1	99	96.053	Heterocephalus_glaber_female
ENSAMEG00000004605	GAR1	54	89.091	ENSIPUG00000003194	gar1	51	90.654	Ictalurus_punctatus
ENSAMEG00000004605	GAR1	53	95.413	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSAMEG00000004605	GAR1	54	89.189	ENSKMAG00000010402	gar1	51	91.589	Kryptolebias_marmoratus
ENSAMEG00000004605	GAR1	74	65.563	ENSLACG00000003306	GAR1	65	86.111	Latimeria_chalumnae
ENSAMEG00000004605	GAR1	54	98.182	ENSMFAG00000024592	GAR1	50	98.165	Macaca_fascicularis
ENSAMEG00000004605	GAR1	53	82.407	ENSMFAG00000003572	-	53	81.651	Macaca_fascicularis
ENSAMEG00000004605	GAR1	54	98.182	ENSMMUG00000021225	GAR1	50	98.165	Macaca_mulatta
ENSAMEG00000004605	GAR1	54	98.182	ENSMNEG00000042594	GAR1	50	98.165	Macaca_nemestrina
ENSAMEG00000004605	GAR1	54	98.182	ENSMLEG00000002496	GAR1	50	98.165	Mandrillus_leucophaeus
ENSAMEG00000004605	GAR1	53	94.495	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSAMEG00000004605	GAR1	69	93.617	ENSMICG00000003326	GAR1	50	97.248	Microcebus_murinus
ENSAMEG00000004605	GAR1	53	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSAMEG00000004605	GAR1	52	95.327	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSAMEG00000004605	GAR1	56	88.596	ENSMODG00000005897	GAR1	55	88.636	Monodelphis_domestica
ENSAMEG00000004605	GAR1	52	91.589	ENSMALG00000009672	gar1	50	91.589	Monopterus_albus
ENSAMEG00000004605	GAR1	53	94.495	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSAMEG00000004605	GAR1	54	94.545	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSAMEG00000004605	GAR1	54	96.364	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSAMEG00000004605	GAR1	54	94.545	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSAMEG00000004605	GAR1	100	98.544	ENSMPUG00000008615	GAR1	99	98.544	Mustela_putorius_furo
ENSAMEG00000004605	GAR1	54	96.364	ENSNGAG00000008268	Gar1	99	96.053	Nannospalax_galili
ENSAMEG00000004605	GAR1	54	98.182	ENSNLEG00000016578	GAR1	50	98.165	Nomascus_leucogenys
ENSAMEG00000004605	GAR1	54	81.982	ENSNLEG00000034282	-	55	81.651	Nomascus_leucogenys
ENSAMEG00000004605	GAR1	52	97.196	ENSODEG00000011083	GAR1	63	96.748	Octodon_degus
ENSAMEG00000004605	GAR1	53	97.248	ENSOCUG00000003901	GAR1	51	97.248	Oryctolagus_cuniculus
ENSAMEG00000004605	GAR1	53	97.248	ENSOGAG00000004693	GAR1	51	97.248	Otolemur_garnettii
ENSAMEG00000004605	GAR1	53	98.165	ENSOARG00000004910	GAR1	99	96.154	Ovis_aries
ENSAMEG00000004605	GAR1	53	98.165	ENSPPAG00000014081	GAR1	55	98.165	Pan_paniscus
ENSAMEG00000004605	GAR1	100	98.544	ENSPPRG00000023697	GAR1	99	98.544	Panthera_pardus
ENSAMEG00000004605	GAR1	100	98.544	ENSPTIG00000021565	GAR1	99	98.544	Panthera_tigris_altaica
ENSAMEG00000004605	GAR1	54	98.182	ENSPTRG00000016364	GAR1	55	98.165	Pan_troglodytes
ENSAMEG00000004605	GAR1	82	81.651	ENSPTRG00000049340	-	51	80.556	Pan_troglodytes
ENSAMEG00000004605	GAR1	54	98.182	ENSPANG00000000639	GAR1	50	98.165	Papio_anubis
ENSAMEG00000004605	GAR1	52	92.453	ENSPKIG00000018991	gar1	61	84.672	Paramormyrops_kingsleyae
ENSAMEG00000004605	GAR1	52	91.509	ENSPSIG00000002970	GAR1	50	89.908	Pelodiscus_sinensis
ENSAMEG00000004605	GAR1	53	94.495	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSAMEG00000004605	GAR1	52	91.589	ENSPFOG00000024155	gar1	51	91.589	Poecilia_formosa
ENSAMEG00000004605	GAR1	52	91.589	ENSPLAG00000015056	gar1	51	91.589	Poecilia_latipinna
ENSAMEG00000004605	GAR1	52	92.523	ENSPMEG00000009320	gar1	51	92.523	Poecilia_mexicana
ENSAMEG00000004605	GAR1	53	98.165	ENSPPYG00000014996	GAR1	50	98.165	Pongo_abelii
ENSAMEG00000004605	GAR1	52	98.131	ENSPCOG00000027049	GAR1	56	98.165	Propithecus_coquereli
ENSAMEG00000004605	GAR1	100	94.231	ENSPVAG00000005992	GAR1	87	94.231	Pteropus_vampyrus
ENSAMEG00000004605	GAR1	54	90.909	ENSPNYG00000020926	gar1	55	84.091	Pundamilia_nyererei
ENSAMEG00000004605	GAR1	63	87.597	ENSPNAG00000019686	gar1	54	86.466	Pygocentrus_nattereri
ENSAMEG00000004605	GAR1	54	95.455	ENSRNOG00000061146	Gar1	63	96.262	Rattus_norvegicus
ENSAMEG00000004605	GAR1	55	80.357	ENSRBIG00000042411	-	53	79.817	Rhinopithecus_bieti
ENSAMEG00000004605	GAR1	52	98.131	ENSRBIG00000019547	GAR1	55	98.165	Rhinopithecus_bieti
ENSAMEG00000004605	GAR1	55	80.357	ENSRROG00000044348	-	52	79.817	Rhinopithecus_roxellana
ENSAMEG00000004605	GAR1	54	98.182	ENSRROG00000028454	GAR1	55	98.165	Rhinopithecus_roxellana
ENSAMEG00000004605	GAR1	53	98.165	ENSSBOG00000024785	GAR1	50	98.165	Saimiri_boliviensis_boliviensis
ENSAMEG00000004605	GAR1	52	92.453	ENSSHAG00000002161	GAR1	61	84.397	Sarcophilus_harrisii
ENSAMEG00000004605	GAR1	53	89.908	ENSSFOG00015013198	gar1	70	80.576	Scleropages_formosus
ENSAMEG00000004605	GAR1	52	92.523	ENSSLDG00000023264	gar1	50	92.523	Seriola_lalandi_dorsalis
ENSAMEG00000004605	GAR1	52	92.453	ENSSPUG00000008707	GAR1	61	90.826	Sphenodon_punctatus
ENSAMEG00000004605	GAR1	54	98.182	ENSSSCG00000009137	GAR1	99	96.154	Sus_scrofa
ENSAMEG00000004605	GAR1	67	83.824	ENSTRUG00000020580	gar1	69	78.472	Takifugu_rubripes
ENSAMEG00000004605	GAR1	51	92.308	ENSTNIG00000013023	gar1	61	92.523	Tetraodon_nigroviridis
ENSAMEG00000004605	GAR1	89	97.826	ENSUAMG00000005652	GAR1	96	97.826	Ursus_americanus
ENSAMEG00000004605	GAR1	53	99.083	ENSUMAG00000000776	GAR1	99	97.087	Ursus_maritimus
ENSAMEG00000004605	GAR1	100	96.618	ENSVPAG00000009844	GAR1	87	96.618	Vicugna_pacos
ENSAMEG00000004605	GAR1	91	97.861	ENSVVUG00000017612	GAR1	96	97.861	Vulpes_vulpes