EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000004763 (Gene tree)
Gene ID: 100472655
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 36894 bases
Position: chrGL192407.1:2075948-2112841
Accession: 100472655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000005072	MIF4G_like	PF09088.11	1.1e-36	1	1
ENSAMEP00000005072	MIF4G_like_2	PF09090.11	1.4e-85	1	1
ENSAMEP00000005072	MIF4G	PF02854.19	9.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000005280	NCBP1-201	2379	XM_002914933	ENSAMEP00000005072	792 (aa)	XP_002914979	G1LDU0

Gene Model

Click here to download ENSAMEG00000004763's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03013	RNA transport	KEGG
aml03015	mRNA surveillance pathway	KEGG
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000004763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000004763	NCBP1	100	99.242	ENSG00000136937	NCBP1	100	99.242	Homo_sapiens
ENSAMEG00000004763	NCBP1	99	83.668	ENSAPOG00000008002	NCBP1	99	83.040	Acanthochromis_polyacanthus
ENSAMEG00000004763	NCBP1	99	84.025	ENSACIG00000000274	NCBP1	99	83.396	Amphilophus_citrinellus
ENSAMEG00000004763	NCBP1	99	83.794	ENSAOCG00000021148	NCBP1	99	83.166	Amphiprion_ocellaris
ENSAMEG00000004763	NCBP1	99	83.794	ENSAPEG00000001701	NCBP1	99	83.166	Amphiprion_percula
ENSAMEG00000004763	NCBP1	99	83.291	ENSATEG00000006929	NCBP1	99	82.915	Anabas_testudineus
ENSAMEG00000004763	NCBP1	95	90.621	ENSAPLG00000016318	NCBP1	100	90.753	Anas_platyrhynchos
ENSAMEG00000004763	NCBP1	100	87.049	ENSACAG00000004409	NCBP1	87	86.924	Anolis_carolinensis
ENSAMEG00000004763	NCBP1	100	95.844	ENSANAG00000025744	NCBP1	99	99.580	Aotus_nancymaae
ENSAMEG00000004763	NCBP1	99	83.040	ENSACLG00000014812	NCBP1	99	83.101	Astatotilapia_calliptera
ENSAMEG00000004763	NCBP1	99	81.955	ENSAMXG00000016364	NCBP1	99	81.454	Astyanax_mexicanus
ENSAMEG00000004763	NCBP1	100	99.116	ENSBTAG00000009732	NCBP1	100	99.116	Bos_taurus
ENSAMEG00000004763	NCBP1	99	34.809	WBGene00018156	ncbp-1	99	34.317	Caenorhabditis_elegans
ENSAMEG00000004763	NCBP1	100	99.242	ENSCJAG00000010840	NCBP1	100	99.390	Callithrix_jacchus
ENSAMEG00000004763	NCBP1	100	99.621	ENSCAFG00000002445	NCBP1	100	99.621	Canis_familiaris
ENSAMEG00000004763	NCBP1	99	98.861	ENSCAFG00020017997	NCBP1	100	99.854	Canis_lupus_dingo
ENSAMEG00000004763	NCBP1	100	98.864	ENSCHIG00000020139	NCBP1	100	98.864	Capra_hircus
ENSAMEG00000004763	NCBP1	51	99.254	ENSTSYG00000011914	NCBP1	98	99.687	Carlito_syrichta
ENSAMEG00000004763	NCBP1	81	89.219	ENSCAPG00000014252	NCBP1	90	89.062	Cavia_aperea
ENSAMEG00000004763	NCBP1	97	97.523	ENSCPOG00000012573	NCBP1	99	97.523	Cavia_porcellus
ENSAMEG00000004763	NCBP1	100	99.369	ENSCCAG00000032297	NCBP1	100	99.369	Cebus_capucinus
ENSAMEG00000004763	NCBP1	100	99.242	ENSCATG00000010052	NCBP1	100	99.242	Cercocebus_atys
ENSAMEG00000004763	NCBP1	100	99.242	ENSCLAG00000014339	NCBP1	100	99.242	Chinchilla_lanigera
ENSAMEG00000004763	NCBP1	100	99.242	ENSCSAG00000010929	NCBP1	100	99.242	Chlorocebus_sabaeus
ENSAMEG00000004763	NCBP1	91	97.458	ENSCHOG00000010332	NCBP1	91	97.458	Choloepus_hoffmanni
ENSAMEG00000004763	NCBP1	100	85.947	ENSCPBG00000024344	NCBP1	99	90.694	Chrysemys_picta_bellii
ENSAMEG00000004763	NCBP1	99	53.952	ENSCING00000008990	-	99	53.701	Ciona_intestinalis
ENSAMEG00000004763	NCBP1	99	52.927	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSAMEG00000004763	NCBP1	100	99.242	ENSCANG00000036913	NCBP1	100	99.242	Colobus_angolensis_palliatus
ENSAMEG00000004763	NCBP1	100	98.359	ENSCGRG00001015771	Ncbp1	100	98.359	Cricetulus_griseus_chok1gshd
ENSAMEG00000004763	NCBP1	99	98.342	ENSCGRG00000010311	Ncbp1	99	98.716	Cricetulus_griseus_crigri
ENSAMEG00000004763	NCBP1	99	82.789	ENSCSEG00000012377	NCBP1	99	83.357	Cynoglossus_semilaevis
ENSAMEG00000004763	NCBP1	99	81.054	ENSCVAG00000008795	NCBP1	99	81.681	Cyprinodon_variegatus
ENSAMEG00000004763	NCBP1	100	98.359	ENSDNOG00000006885	NCBP1	100	98.389	Dasypus_novemcinctus
ENSAMEG00000004763	NCBP1	100	94.095	ENSDORG00000013652	Ncbp1	100	94.095	Dipodomys_ordii
ENSAMEG00000004763	NCBP1	100	57.249	FBgn0022942	Cbp80	100	57.731	Drosophila_melanogaster
ENSAMEG00000004763	NCBP1	84	33.918	FBgn0038887	CG7907	87	33.918	Drosophila_melanogaster
ENSAMEG00000004763	NCBP1	89	94.323	ENSETEG00000009705	NCBP1	89	94.323	Echinops_telfairi
ENSAMEG00000004763	NCBP1	100	73.585	ENSEBUG00000008386	NCBP1	100	73.333	Eptatretus_burgeri
ENSAMEG00000004763	NCBP1	100	99.116	ENSEASG00005022795	NCBP1	100	99.116	Equus_asinus_asinus
ENSAMEG00000004763	NCBP1	100	99.242	ENSECAG00000013847	NCBP1	100	99.242	Equus_caballus
ENSAMEG00000004763	NCBP1	95	94.040	ENSEEUG00000015973	NCBP1	99	93.642	Erinaceus_europaeus
ENSAMEG00000004763	NCBP1	99	80.803	ENSELUG00000022519	NCBP1	99	81.556	Esox_lucius
ENSAMEG00000004763	NCBP1	100	99.495	ENSFCAG00000001206	NCBP1	100	99.495	Felis_catus
ENSAMEG00000004763	NCBP1	98	89.440	ENSFALG00000001193	NCBP1	100	89.567	Ficedula_albicollis
ENSAMEG00000004763	NCBP1	100	98.990	ENSFDAG00000010864	NCBP1	100	98.990	Fukomys_damarensis
ENSAMEG00000004763	NCBP1	99	82.560	ENSFHEG00000000655	NCBP1	99	82.058	Fundulus_heteroclitus
ENSAMEG00000004763	NCBP1	99	79.674	ENSGMOG00000008653	NCBP1	99	79.674	Gadus_morhua
ENSAMEG00000004763	NCBP1	98	90.629	ENSGALG00000002087	NCBP1	100	90.290	Gallus_gallus
ENSAMEG00000004763	NCBP1	99	83.059	ENSGAFG00000017787	NCBP1	99	82.933	Gambusia_affinis
ENSAMEG00000004763	NCBP1	99	82.206	ENSGACG00000016772	NCBP1	98	81.830	Gasterosteus_aculeatus
ENSAMEG00000004763	NCBP1	98	89.668	ENSGAGG00000019483	NCBP1	99	90.417	Gopherus_agassizii
ENSAMEG00000004763	NCBP1	100	99.242	ENSGGOG00000001376	NCBP1	100	99.242	Gorilla_gorilla
ENSAMEG00000004763	NCBP1	99	83.040	ENSHBUG00000020843	NCBP1	99	82.663	Haplochromis_burtoni
ENSAMEG00000004763	NCBP1	100	86.272	ENSHGLG00000018112	-	100	86.272	Heterocephalus_glaber_female
ENSAMEG00000004763	NCBP1	100	99.116	ENSHGLG00000001882	NCBP1	100	99.116	Heterocephalus_glaber_female
ENSAMEG00000004763	NCBP1	100	99.116	ENSHGLG00100013014	NCBP1	100	99.116	Heterocephalus_glaber_male
ENSAMEG00000004763	NCBP1	100	86.020	ENSHGLG00100017373	-	100	86.020	Heterocephalus_glaber_male
ENSAMEG00000004763	NCBP1	78	72.540	ENSHCOG00000000204	NCBP1	92	72.540	Hippocampus_comes
ENSAMEG00000004763	NCBP1	99	82.309	ENSIPUG00000007275	ncbp1	99	81.932	Ictalurus_punctatus
ENSAMEG00000004763	NCBP1	100	99.116	ENSSTOG00000002695	NCBP1	100	99.116	Ictidomys_tridecemlineatus
ENSAMEG00000004763	NCBP1	99	82.412	ENSKMAG00000003594	NCBP1	99	86.235	Kryptolebias_marmoratus
ENSAMEG00000004763	NCBP1	99	81.289	ENSLBEG00000011661	NCBP1	99	80.793	Labrus_bergylta
ENSAMEG00000004763	NCBP1	100	80.721	ENSLACG00000013955	NCBP1	100	80.224	Latimeria_chalumnae
ENSAMEG00000004763	NCBP1	99	72.512	ENSLOCG00000009579	NCBP1	99	72.512	Lepisosteus_oculatus
ENSAMEG00000004763	NCBP1	100	98.864	ENSLAFG00000005999	NCBP1	100	98.864	Loxodonta_africana
ENSAMEG00000004763	NCBP1	100	99.242	ENSMFAG00000030994	NCBP1	100	99.242	Macaca_fascicularis
ENSAMEG00000004763	NCBP1	99	99.360	ENSMMUG00000012281	NCBP1	99	99.430	Macaca_mulatta
ENSAMEG00000004763	NCBP1	100	99.242	ENSMNEG00000042790	NCBP1	100	99.242	Macaca_nemestrina
ENSAMEG00000004763	NCBP1	100	99.242	ENSMLEG00000030374	NCBP1	100	99.242	Mandrillus_leucophaeus
ENSAMEG00000004763	NCBP1	99	83.417	ENSMAMG00000014806	NCBP1	99	82.915	Mastacembelus_armatus
ENSAMEG00000004763	NCBP1	99	83.040	ENSMZEG00005003469	NCBP1	99	82.663	Maylandia_zebra
ENSAMEG00000004763	NCBP1	97	82.812	ENSMZEG00005009290	-	99	82.682	Maylandia_zebra
ENSAMEG00000004763	NCBP1	99	97.716	ENSMAUG00000020583	Ncbp1	99	97.716	Mesocricetus_auratus
ENSAMEG00000004763	NCBP1	100	98.864	ENSMICG00000012682	NCBP1	100	98.864	Microcebus_murinus
ENSAMEG00000004763	NCBP1	100	97.980	ENSMOCG00000015818	Ncbp1	100	97.980	Microtus_ochrogaster
ENSAMEG00000004763	NCBP1	90	82.517	ENSMMOG00000002610	NCBP1	99	82.378	Mola_mola
ENSAMEG00000004763	NCBP1	100	93.687	ENSMODG00000003202	NCBP1	99	93.434	Monodelphis_domestica
ENSAMEG00000004763	NCBP1	99	82.663	ENSMALG00000003547	NCBP1	99	82.161	Monopterus_albus
ENSAMEG00000004763	NCBP1	100	97.980	MGP_CAROLIEiJ_G0025982	Ncbp1	100	97.980	Mus_caroli
ENSAMEG00000004763	NCBP1	100	97.980	ENSMUSG00000028330	Ncbp1	100	97.980	Mus_musculus
ENSAMEG00000004763	NCBP1	100	98.232	MGP_PahariEiJ_G0028318	Ncbp1	100	98.232	Mus_pahari
ENSAMEG00000004763	NCBP1	100	97.980	MGP_SPRETEiJ_G0026945	Ncbp1	100	97.980	Mus_spretus
ENSAMEG00000004763	NCBP1	100	99.495	ENSMPUG00000006399	NCBP1	100	99.495	Mustela_putorius_furo
ENSAMEG00000004763	NCBP1	98	98.074	ENSMLUG00000015201	NCBP1	100	98.074	Myotis_lucifugus
ENSAMEG00000004763	NCBP1	100	98.232	ENSNGAG00000014101	Ncbp1	100	98.232	Nannospalax_galili
ENSAMEG00000004763	NCBP1	76	85.590	ENSNBRG00000014674	NCBP1	97	85.590	Neolamprologus_brichardi
ENSAMEG00000004763	NCBP1	100	99.242	ENSNLEG00000016909	NCBP1	100	99.242	Nomascus_leucogenys
ENSAMEG00000004763	NCBP1	89	95.045	ENSMEUG00000010672	NCBP1	90	92.793	Notamacropus_eugenii
ENSAMEG00000004763	NCBP1	84	92.542	ENSOPRG00000002144	-	88	92.542	Ochotona_princeps
ENSAMEG00000004763	NCBP1	100	98.990	ENSODEG00000003232	NCBP1	100	98.990	Octodon_degus
ENSAMEG00000004763	NCBP1	99	83.040	ENSONIG00000001502	NCBP1	99	82.663	Oreochromis_niloticus
ENSAMEG00000004763	NCBP1	79	95.345	ENSOANG00000001918	NCBP1	100	95.345	Ornithorhynchus_anatinus
ENSAMEG00000004763	NCBP1	98	98.715	ENSOCUG00000013853	NCBP1	97	98.715	Oryctolagus_cuniculus
ENSAMEG00000004763	NCBP1	99	81.375	ENSORLG00000011008	NCBP1	99	81.000	Oryzias_latipes
ENSAMEG00000004763	NCBP1	99	81.375	ENSORLG00020017455	NCBP1	99	81.000	Oryzias_latipes_hni
ENSAMEG00000004763	NCBP1	99	81.500	ENSORLG00015012127	NCBP1	99	81.125	Oryzias_latipes_hsok
ENSAMEG00000004763	NCBP1	99	82.000	ENSOMEG00000020698	NCBP1	99	81.875	Oryzias_melastigma
ENSAMEG00000004763	NCBP1	100	99.621	ENSOGAG00000013888	NCBP1	100	99.621	Otolemur_garnettii
ENSAMEG00000004763	NCBP1	100	98.864	ENSOARG00000011233	NCBP1	100	98.864	Ovis_aries
ENSAMEG00000004763	NCBP1	100	99.242	ENSPPAG00000026462	NCBP1	100	99.242	Pan_paniscus
ENSAMEG00000004763	NCBP1	100	99.621	ENSPPRG00000022574	NCBP1	100	99.621	Panthera_pardus
ENSAMEG00000004763	NCBP1	100	99.621	ENSPTIG00000018507	NCBP1	100	99.621	Panthera_tigris_altaica
ENSAMEG00000004763	NCBP1	100	99.242	ENSPTRG00000021167	NCBP1	100	99.242	Pan_troglodytes
ENSAMEG00000004763	NCBP1	100	99.242	ENSPANG00000025591	NCBP1	100	99.242	Papio_anubis
ENSAMEG00000004763	NCBP1	100	81.179	ENSPKIG00000015861	NCBP1	100	81.054	Paramormyrops_kingsleyae
ENSAMEG00000004763	NCBP1	64	89.453	ENSPSIG00000009558	NCBP1	100	89.648	Pelodiscus_sinensis
ENSAMEG00000004763	NCBP1	99	79.774	ENSPMGG00000020476	NCBP1	99	79.271	Periophthalmus_magnuspinnatus
ENSAMEG00000004763	NCBP1	100	97.854	ENSPEMG00000020105	Ncbp1	100	97.854	Peromyscus_maniculatus_bairdii
ENSAMEG00000004763	NCBP1	100	67.621	ENSPMAG00000005533	NCBP1	100	67.621	Petromyzon_marinus
ENSAMEG00000004763	NCBP1	100	93.434	ENSPCIG00000015800	NCBP1	99	94.715	Phascolarctos_cinereus
ENSAMEG00000004763	NCBP1	99	82.250	ENSPFOG00000004158	NCBP1	99	81.875	Poecilia_formosa
ENSAMEG00000004763	NCBP1	99	82.685	ENSPLAG00000020002	NCBP1	99	82.309	Poecilia_latipinna
ENSAMEG00000004763	NCBP1	99	82.685	ENSPMEG00000019821	NCBP1	99	82.309	Poecilia_mexicana
ENSAMEG00000004763	NCBP1	99	82.581	ENSPREG00000006035	NCBP1	99	82.206	Poecilia_reticulata
ENSAMEG00000004763	NCBP1	100	99.242	ENSPPYG00000019426	NCBP1	100	99.242	Pongo_abelii
ENSAMEG00000004763	NCBP1	90	90.212	ENSPCAG00000009943	NCBP1	90	90.212	Procavia_capensis
ENSAMEG00000004763	NCBP1	81	99.390	ENSPCOG00000020024	NCBP1	98	99.390	Propithecus_coquereli
ENSAMEG00000004763	NCBP1	100	98.990	ENSPVAG00000005924	NCBP1	100	98.990	Pteropus_vampyrus
ENSAMEG00000004763	NCBP1	90	83.240	ENSPNYG00000002140	NCBP1	99	83.101	Pundamilia_nyererei
ENSAMEG00000004763	NCBP1	99	82.456	ENSPNAG00000027753	NCBP1	99	81.830	Pygocentrus_nattereri
ENSAMEG00000004763	NCBP1	100	98.106	ENSRNOG00000023605	Ncbp1	100	98.106	Rattus_norvegicus
ENSAMEG00000004763	NCBP1	100	99.242	ENSRBIG00000043175	NCBP1	100	99.242	Rhinopithecus_bieti
ENSAMEG00000004763	NCBP1	100	99.242	ENSRROG00000029767	NCBP1	100	99.242	Rhinopithecus_roxellana
ENSAMEG00000004763	NCBP1	100	99.369	ENSSBOG00000019378	NCBP1	100	99.369	Saimiri_boliviensis_boliviensis
ENSAMEG00000004763	NCBP1	69	95.720	ENSSHAG00000015882	NCBP1	73	95.720	Sarcophilus_harrisii
ENSAMEG00000004763	NCBP1	98	81.538	ENSSFOG00015001872	NCBP1	100	80.682	Scleropages_formosus
ENSAMEG00000004763	NCBP1	99	81.784	ENSSMAG00000007463	NCBP1	99	81.533	Scophthalmus_maximus
ENSAMEG00000004763	NCBP1	99	83.312	ENSSDUG00000007019	NCBP1	100	82.900	Seriola_dumerili
ENSAMEG00000004763	NCBP1	99	83.040	ENSSLDG00000021924	NCBP1	99	82.663	Seriola_lalandi_dorsalis
ENSAMEG00000004763	NCBP1	85	91.048	ENSSARG00000007274	NCBP1	87	91.048	Sorex_araneus
ENSAMEG00000004763	NCBP1	100	81.944	ENSSPUG00000008609	NCBP1	100	81.944	Sphenodon_punctatus
ENSAMEG00000004763	NCBP1	99	83.543	ENSSPAG00000012550	NCBP1	99	83.166	Stegastes_partitus
ENSAMEG00000004763	NCBP1	100	99.369	ENSSSCG00000005366	NCBP1	100	99.369	Sus_scrofa
ENSAMEG00000004763	NCBP1	100	83.689	ENSTGUG00000001472	NCBP1	100	83.814	Taeniopygia_guttata
ENSAMEG00000004763	NCBP1	99	81.910	ENSTRUG00000005287	NCBP1	99	81.533	Takifugu_rubripes
ENSAMEG00000004763	NCBP1	100	95.833	ENSTBEG00000004035	NCBP1	100	95.833	Tupaia_belangeri
ENSAMEG00000004763	NCBP1	88	99.593	ENSTTRG00000000507	NCBP1	88	99.593	Tursiops_truncatus
ENSAMEG00000004763	NCBP1	100	99.495	ENSUAMG00000005471	NCBP1	100	99.495	Ursus_americanus
ENSAMEG00000004763	NCBP1	97	97.399	ENSUMAG00000011865	NCBP1	100	99.854	Ursus_maritimus
ENSAMEG00000004763	NCBP1	100	95.202	ENSVPAG00000010537	NCBP1	100	95.202	Vicugna_pacos
ENSAMEG00000004763	NCBP1	100	99.621	ENSVVUG00000019725	NCBP1	100	99.621	Vulpes_vulpes
ENSAMEG00000004763	NCBP1	100	81.258	ENSXETG00000010179	ncbp1	100	81.258	Xenopus_tropicalis
ENSAMEG00000004763	NCBP1	99	82.811	ENSXMAG00000018253	NCBP1	99	82.434	Xiphophorus_maculatus