EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000004776 (Gene tree)
Gene ID: 100474861
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 27673 bases
Position: chrGL192359.1:1704177-1731849
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000005077	RRM_1	PF00076.22	8.6e-57	1	3
ENSAMEP00000005077	RRM_1	PF00076.22	8.6e-57	2	3
ENSAMEP00000005077	RRM_1	PF00076.22	8.6e-57	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000005285	RBM28-201	2463	-	ENSAMEP00000005077	820 (aa)	-	G1LDU5

Gene Model

Click here to download ENSAMEG00000004776's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000004776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000004776	RBM28	92	93.478	ENSG00000106344	RBM28	100	97.500	Homo_sapiens
ENSAMEG00000004776	RBM28	63	55.844	ENSAPOG00000015512	rbm28	97	56.322	Acanthochromis_polyacanthus
ENSAMEG00000004776	RBM28	52	54.186	ENSACIG00000023153	rbm28	100	51.235	Amphilophus_citrinellus
ENSAMEG00000004776	RBM28	63	57.895	ENSAOCG00000000462	rbm28	97	57.471	Amphiprion_ocellaris
ENSAMEG00000004776	RBM28	63	57.895	ENSAPEG00000012996	rbm28	97	57.471	Amphiprion_percula
ENSAMEG00000004776	RBM28	65	58.974	ENSATEG00000001672	rbm28	99	58.696	Anabas_testudineus
ENSAMEG00000004776	RBM28	92	92.391	ENSANAG00000033922	RBM28	100	92.391	Aotus_nancymaae
ENSAMEG00000004776	RBM28	100	48.578	ENSACLG00000025024	rbm28	97	58.621	Astatotilapia_calliptera
ENSAMEG00000004776	RBM28	55	56.920	ENSAMXG00000000763	rbm28	99	58.797	Astyanax_mexicanus
ENSAMEG00000004776	RBM28	92	92.708	ENSBTAG00000017001	RBM28	100	97.500	Bos_taurus
ENSAMEG00000004776	RBM28	92	89.583	ENSCJAG00000017731	RBM28	100	89.583	Callithrix_jacchus
ENSAMEG00000004776	RBM28	90	95.652	ENSCAFG00000001667	RBM28	100	95.652	Canis_familiaris
ENSAMEG00000004776	RBM28	90	95.652	ENSCAFG00020021648	RBM28	100	95.652	Canis_lupus_dingo
ENSAMEG00000004776	RBM28	92	94.444	ENSCHIG00000014146	RBM28	99	94.444	Capra_hircus
ENSAMEG00000004776	RBM28	69	88.542	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSAMEG00000004776	RBM28	74	58.979	ENSCAPG00000013218	RBM28	97	58.649	Cavia_aperea
ENSAMEG00000004776	RBM28	92	90.217	ENSCPOG00000006253	RBM28	100	90.217	Cavia_porcellus
ENSAMEG00000004776	RBM28	92	91.304	ENSCCAG00000035105	RBM28	100	91.304	Cebus_capucinus
ENSAMEG00000004776	RBM28	90	92.391	ENSCATG00000040497	RBM28	83	95.000	Cercocebus_atys
ENSAMEG00000004776	RBM28	92	89.583	ENSCLAG00000003707	RBM28	100	89.583	Chinchilla_lanigera
ENSAMEG00000004776	RBM28	92	94.624	ENSCSAG00000010161	RBM28	99	88.235	Chlorocebus_sabaeus
ENSAMEG00000004776	RBM28	52	91.304	ENSCHOG00000001994	-	58	91.304	Choloepus_hoffmanni
ENSAMEG00000004776	RBM28	64	40.900	ENSCING00000009238	-	99	36.637	Ciona_intestinalis
ENSAMEG00000004776	RBM28	58	35.154	ENSCSAVG00000007149	-	95	42.647	Ciona_savignyi
ENSAMEG00000004776	RBM28	83	92.391	ENSCANG00000038397	RBM28	100	97.500	Colobus_angolensis_palliatus
ENSAMEG00000004776	RBM28	70	96.154	ENSCGRG00001021278	Rbm28	73	92.391	Cricetulus_griseus_chok1gshd
ENSAMEG00000004776	RBM28	70	96.154	ENSCGRG00000005098	Rbm28	100	92.391	Cricetulus_griseus_crigri
ENSAMEG00000004776	RBM28	90	56.410	ENSCSEG00000004212	rbm28	98	54.444	Cynoglossus_semilaevis
ENSAMEG00000004776	RBM28	66	57.447	ENSCVAG00000010493	rbm28	98	57.447	Cyprinodon_variegatus
ENSAMEG00000004776	RBM28	92	90.217	ENSDNOG00000001124	RBM28	100	90.217	Dasypus_novemcinctus
ENSAMEG00000004776	RBM28	60	79.839	ENSDORG00000004184	Rbm28	94	80.573	Dipodomys_ordii
ENSAMEG00000004776	RBM28	62	40.734	FBgn0260456	CG4806	93	35.982	Drosophila_melanogaster
ENSAMEG00000004776	RBM28	90	86.813	ENSETEG00000007130	RBM28	98	86.813	Echinops_telfairi
ENSAMEG00000004776	RBM28	90	46.753	ENSEBUG00000004419	rbm28	95	46.753	Eptatretus_burgeri
ENSAMEG00000004776	RBM28	72	92.391	ENSEASG00005008528	RBM28	100	92.391	Equus_asinus_asinus
ENSAMEG00000004776	RBM28	72	92.391	ENSECAG00000007745	RBM28	100	92.391	Equus_caballus
ENSAMEG00000004776	RBM28	90	88.043	ENSEEUG00000002389	RBM28	98	88.043	Erinaceus_europaeus
ENSAMEG00000004776	RBM28	64	58.974	ENSELUG00000020602	rbm28	96	60.494	Esox_lucius
ENSAMEG00000004776	RBM28	92	94.565	ENSFCAG00000000946	RBM28	100	97.500	Felis_catus
ENSAMEG00000004776	RBM28	92	86.458	ENSFDAG00000010169	RBM28	100	86.458	Fukomys_damarensis
ENSAMEG00000004776	RBM28	75	70.000	ENSGMOG00000007091	rbm28	98	54.762	Gadus_morhua
ENSAMEG00000004776	RBM28	55	55.752	ENSGAFG00000004802	rbm28	97	55.850	Gambusia_affinis
ENSAMEG00000004776	RBM28	64	56.410	ENSGACG00000012612	rbm28	97	56.098	Gasterosteus_aculeatus
ENSAMEG00000004776	RBM28	74	79.570	ENSGAGG00000008873	RBM28	89	79.670	Gopherus_agassizii
ENSAMEG00000004776	RBM28	87	90.566	ENSGGOG00000004644	RBM28	97	90.566	Gorilla_gorilla
ENSAMEG00000004776	RBM28	78	60.256	ENSHBUG00000009611	rbm28	91	58.621	Haplochromis_burtoni
ENSAMEG00000004776	RBM28	92	88.043	ENSHGLG00000005409	RBM28	100	88.043	Heterocephalus_glaber_female
ENSAMEG00000004776	RBM28	92	88.043	ENSHGLG00100016458	RBM28	100	88.043	Heterocephalus_glaber_male
ENSAMEG00000004776	RBM28	77	56.180	ENSHCOG00000010597	rbm28	88	56.180	Hippocampus_comes
ENSAMEG00000004776	RBM28	88	92.771	ENSSTOG00000002169	RBM28	74	91.304	Ictidomys_tridecemlineatus
ENSAMEG00000004776	RBM28	64	61.538	ENSKMAG00000013348	rbm28	96	60.920	Kryptolebias_marmoratus
ENSAMEG00000004776	RBM28	66	56.114	ENSLBEG00000012998	rbm28	96	55.556	Labrus_bergylta
ENSAMEG00000004776	RBM28	66	69.620	ENSLACG00000010485	-	96	69.620	Latimeria_chalumnae
ENSAMEG00000004776	RBM28	91	77.922	ENSLOCG00000015541	rbm28	76	78.481	Lepisosteus_oculatus
ENSAMEG00000004776	RBM28	92	91.304	ENSLAFG00000010717	RBM28	100	85.294	Loxodonta_africana
ENSAMEG00000004776	RBM28	92	92.391	ENSMFAG00000031036	RBM28	83	95.000	Macaca_fascicularis
ENSAMEG00000004776	RBM28	92	92.391	ENSMMUG00000007250	RBM28	100	95.000	Macaca_mulatta
ENSAMEG00000004776	RBM28	90	92.391	ENSMNEG00000036970	RBM28	100	85.294	Macaca_nemestrina
ENSAMEG00000004776	RBM28	77	92.391	ENSMLEG00000037717	RBM28	70	92.391	Mandrillus_leucophaeus
ENSAMEG00000004776	RBM28	90	61.538	ENSMAMG00000008525	rbm28	97	60.920	Mastacembelus_armatus
ENSAMEG00000004776	RBM28	79	51.187	ENSMZEG00005019625	rbm28	92	52.959	Maylandia_zebra
ENSAMEG00000004776	RBM28	70	96.154	ENSMAUG00000002263	Rbm28	100	92.391	Mesocricetus_auratus
ENSAMEG00000004776	RBM28	65	85.253	ENSMICG00000000107	RBM28	71	85.656	Microcebus_murinus
ENSAMEG00000004776	RBM28	88	96.154	ENSMOCG00000014615	Rbm28	100	92.391	Microtus_ochrogaster
ENSAMEG00000004776	RBM28	61	48.907	ENSMMOG00000008600	rbm28	99	50.000	Mola_mola
ENSAMEG00000004776	RBM28	66	85.000	ENSMODG00000015151	RBM28	97	83.146	Monodelphis_domestica
ENSAMEG00000004776	RBM28	64	64.103	ENSMALG00000006419	rbm28	97	62.069	Monopterus_albus
ENSAMEG00000004776	RBM28	92	89.583	MGP_CAROLIEiJ_G0028162	Rbm28	100	82.692	Mus_caroli
ENSAMEG00000004776	RBM28	92	90.625	ENSMUSG00000029701	Rbm28	100	83.654	Mus_musculus
ENSAMEG00000004776	RBM28	92	90.625	MGP_PahariEiJ_G0021920	Rbm28	100	83.654	Mus_pahari
ENSAMEG00000004776	RBM28	92	90.625	MGP_SPRETEiJ_G0029162	Rbm28	100	83.654	Mus_spretus
ENSAMEG00000004776	RBM28	90	97.826	ENSMPUG00000006511	RBM28	100	97.826	Mustela_putorius_furo
ENSAMEG00000004776	RBM28	72	91.304	ENSMLUG00000002186	RBM28	100	91.304	Myotis_lucifugus
ENSAMEG00000004776	RBM28	92	88.043	ENSNGAG00000017946	-	100	88.043	Nannospalax_galili
ENSAMEG00000004776	RBM28	92	92.391	ENSNGAG00000006480	-	100	92.391	Nannospalax_galili
ENSAMEG00000004776	RBM28	71	92.391	ENSNLEG00000012307	RBM28	100	85.041	Nomascus_leucogenys
ENSAMEG00000004776	RBM28	74	87.500	ENSMEUG00000009611	RBM28	86	89.362	Notamacropus_eugenii
ENSAMEG00000004776	RBM28	65	90.123	ENSODEG00000013217	-	81	90.123	Octodon_degus
ENSAMEG00000004776	RBM28	92	84.783	ENSODEG00000003213	-	100	84.375	Octodon_degus
ENSAMEG00000004776	RBM28	64	60.256	ENSONIG00000014924	rbm28	97	58.621	Oreochromis_niloticus
ENSAMEG00000004776	RBM28	67	84.615	ENSOANG00000000815	-	98	80.220	Ornithorhynchus_anatinus
ENSAMEG00000004776	RBM28	72	91.304	ENSOCUG00000003009	RBM28	74	91.304	Oryctolagus_cuniculus
ENSAMEG00000004776	RBM28	88	58.442	ENSORLG00000009636	rbm28	97	58.621	Oryzias_latipes
ENSAMEG00000004776	RBM28	65	59.740	ENSORLG00020002123	rbm28	97	59.770	Oryzias_latipes_hni
ENSAMEG00000004776	RBM28	75	73.913	ENSORLG00015015030	rbm28	93	73.913	Oryzias_latipes_hsok
ENSAMEG00000004776	RBM28	64	58.974	ENSOMEG00000007801	rbm28	97	58.621	Oryzias_melastigma
ENSAMEG00000004776	RBM28	65	95.000	ENSOGAG00000006011	RBM28	100	95.000	Otolemur_garnettii
ENSAMEG00000004776	RBM28	92	91.667	ENSOARG00000002547	RBM28	100	91.667	Ovis_aries
ENSAMEG00000004776	RBM28	92	93.478	ENSPPAG00000041730	RBM28	100	93.478	Pan_paniscus
ENSAMEG00000004776	RBM28	90	94.565	ENSPPRG00000004420	RBM28	100	97.500	Panthera_pardus
ENSAMEG00000004776	RBM28	90	94.565	ENSPTIG00000008550	RBM28	100	97.500	Panthera_tigris_altaica
ENSAMEG00000004776	RBM28	92	93.478	ENSPTRG00000019659	RBM28	100	93.478	Pan_troglodytes
ENSAMEG00000004776	RBM28	92	92.391	ENSPANG00000022295	RBM28	100	95.000	Papio_anubis
ENSAMEG00000004776	RBM28	89	61.538	ENSPKIG00000023453	rbm28	97	62.069	Paramormyrops_kingsleyae
ENSAMEG00000004776	RBM28	89	95.506	ENSPEMG00000020673	Rbm28	100	91.667	Peromyscus_maniculatus_bairdii
ENSAMEG00000004776	RBM28	90	85.185	ENSPCIG00000012810	RBM28	98	78.571	Phascolarctos_cinereus
ENSAMEG00000004776	RBM28	66	58.974	ENSPFOG00000018209	rbm28	97	58.242	Poecilia_formosa
ENSAMEG00000004776	RBM28	66	58.974	ENSPLAG00000016078	rbm28	94	58.947	Poecilia_latipinna
ENSAMEG00000004776	RBM28	66	58.974	ENSPMEG00000004292	rbm28	97	58.242	Poecilia_mexicana
ENSAMEG00000004776	RBM28	65	58.974	ENSPREG00000014287	rbm28	96	58.242	Poecilia_reticulata
ENSAMEG00000004776	RBM28	92	93.478	ENSPPYG00000017975	RBM28	100	93.478	Pongo_abelii
ENSAMEG00000004776	RBM28	68	88.889	ENSPCAG00000008223	RBM28	80	87.912	Procavia_capensis
ENSAMEG00000004776	RBM28	65	97.500	ENSPCOG00000016797	RBM28	100	85.656	Propithecus_coquereli
ENSAMEG00000004776	RBM28	69	97.778	ENSPVAG00000005443	RBM28	75	97.917	Pteropus_vampyrus
ENSAMEG00000004776	RBM28	88	60.256	ENSPNYG00000014003	rbm28	97	58.621	Pundamilia_nyererei
ENSAMEG00000004776	RBM28	92	90.625	ENSRNOG00000005468	Rbm28	77	83.654	Rattus_norvegicus
ENSAMEG00000004776	RBM28	92	93.478	ENSRBIG00000033990	RBM28	83	97.500	Rhinopithecus_bieti
ENSAMEG00000004776	RBM28	92	93.478	ENSRROG00000040747	RBM28	100	97.500	Rhinopithecus_roxellana
ENSAMEG00000004776	RBM28	79	92.391	ENSSBOG00000012308	RBM28	100	92.391	Saimiri_boliviensis_boliviensis
ENSAMEG00000004776	RBM28	89	69.048	ENSSHAG00000017017	RBM28	96	68.817	Sarcophilus_harrisii
ENSAMEG00000004776	RBM28	90	59.211	ENSSFOG00015001231	rbm28	98	58.242	Scleropages_formosus
ENSAMEG00000004776	RBM28	63	49.130	ENSSMAG00000003885	rbm28	98	50.920	Scophthalmus_maximus
ENSAMEG00000004776	RBM28	55	56.579	ENSSDUG00000014270	rbm28	96	54.473	Seriola_dumerili
ENSAMEG00000004776	RBM28	64	56.140	ENSSLDG00000020099	rbm28	97	55.172	Seriola_lalandi_dorsalis
ENSAMEG00000004776	RBM28	71	88.542	ENSSARG00000008303	RBM28	81	88.542	Sorex_araneus
ENSAMEG00000004776	RBM28	82	50.727	ENSSPUG00000000838	RBM28	80	73.529	Sphenodon_punctatus
ENSAMEG00000004776	RBM28	54	52.586	ENSSPAG00000023305	rbm28	92	51.542	Stegastes_partitus
ENSAMEG00000004776	RBM28	92	91.304	ENSSSCG00000031847	RBM28	100	91.304	Sus_scrofa
ENSAMEG00000004776	RBM28	65	62.821	ENSTRUG00000013311	rbm28	97	62.069	Takifugu_rubripes
ENSAMEG00000004776	RBM28	88	61.538	ENSTNIG00000017962	rbm28	75	61.364	Tetraodon_nigroviridis
ENSAMEG00000004776	RBM28	76	86.095	ENSTBEG00000012749	RBM28	86	86.095	Tupaia_belangeri
ENSAMEG00000004776	RBM28	92	95.556	ENSTTRG00000013647	RBM28	99	95.556	Tursiops_truncatus
ENSAMEG00000004776	RBM28	90	96.739	ENSUAMG00000006949	RBM28	100	96.739	Ursus_americanus
ENSAMEG00000004776	RBM28	90	96.739	ENSUMAG00000005997	RBM28	100	96.739	Ursus_maritimus
ENSAMEG00000004776	RBM28	78	76.399	ENSVPAG00000008304	RBM28	86	75.688	Vicugna_pacos
ENSAMEG00000004776	RBM28	90	95.652	ENSVVUG00000007270	RBM28	100	95.652	Vulpes_vulpes
ENSAMEG00000004776	RBM28	70	66.667	ENSXETG00000009271	rbm28	97	66.667	Xenopus_tropicalis
ENSAMEG00000004776	RBM28	55	52.667	ENSXCOG00000020357	rbm28	99	50.410	Xiphophorus_couchianus
ENSAMEG00000004776	RBM28	66	58.974	ENSXMAG00000004415	rbm28	97	58.242	Xiphophorus_maculatus