EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000004812 (Gene tree)
Gene ID: 100477453
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 42327 bases
Position: chrGL192457.1:1108196-1150522
Accession: 100477453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000005135	R3H	PF01424.22	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000005346	R3HDM2-201	3138	XM_019796200	ENSAMEP00000005135	1045 (aa)	XP_019651759	G1LE01

Gene Model

Click here to download ENSAMEG00000004812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000004812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000004812	R3HDM2	100	48.164	ENSAMEG00000014886	R3HDM1	99	48.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000004812	R3HDM2	100	93.881	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSAMEG00000004812	R3HDM2	62	36.882	ENSAPOG00000021873	-	87	35.465	Acanthochromis_polyacanthus
ENSAMEG00000004812	R3HDM2	99	65.146	ENSAPOG00000020341	r3hdm2	95	67.627	Acanthochromis_polyacanthus
ENSAMEG00000004812	R3HDM2	93	62.338	ENSACIG00000016146	r3hdm2	98	61.287	Amphilophus_citrinellus
ENSAMEG00000004812	R3HDM2	99	65.055	ENSAOCG00000023694	r3hdm2	95	67.531	Amphiprion_ocellaris
ENSAMEG00000004812	R3HDM2	99	63.960	ENSAPEG00000008851	r3hdm2	99	66.442	Amphiprion_percula
ENSAMEG00000004812	R3HDM2	99	60.438	ENSATEG00000025024	r3hdm2	100	64.945	Anabas_testudineus
ENSAMEG00000004812	R3HDM2	62	74.962	ENSAPLG00000004298	R3HDM2	56	74.661	Anas_platyrhynchos
ENSAMEG00000004812	R3HDM2	100	78.212	ENSACAG00000006388	R3HDM2	100	76.710	Anolis_carolinensis
ENSAMEG00000004812	R3HDM2	98	87.719	ENSANAG00000031310	-	100	84.840	Aotus_nancymaae
ENSAMEG00000004812	R3HDM2	100	93.690	ENSANAG00000025397	-	100	93.690	Aotus_nancymaae
ENSAMEG00000004812	R3HDM2	99	64.927	ENSACLG00000019106	r3hdm2	95	67.500	Astatotilapia_calliptera
ENSAMEG00000004812	R3HDM2	88	70.557	ENSAMXG00000017180	r3hdm2	99	58.777	Astyanax_mexicanus
ENSAMEG00000004812	R3HDM2	100	92.639	ENSBTAG00000018361	R3HDM2	100	92.639	Bos_taurus
ENSAMEG00000004812	R3HDM2	100	93.403	ENSCJAG00000007365	R3HDM2	100	93.403	Callithrix_jacchus
ENSAMEG00000004812	R3HDM2	98	97.955	ENSCAFG00000000215	R3HDM2	100	95.315	Canis_familiaris
ENSAMEG00000004812	R3HDM2	100	97.036	ENSCAFG00020023713	R3HDM2	100	97.036	Canis_lupus_dingo
ENSAMEG00000004812	R3HDM2	100	95.507	ENSCHIG00000014022	R3HDM2	100	95.507	Capra_hircus
ENSAMEG00000004812	R3HDM2	100	92.256	ENSTSYG00000001449	R3HDM2	100	91.874	Carlito_syrichta
ENSAMEG00000004812	R3HDM2	100	93.499	ENSCPOG00000009217	R3HDM2	100	92.161	Cavia_porcellus
ENSAMEG00000004812	R3HDM2	89	93.140	ENSCCAG00000026083	R3HDM2	100	91.318	Cebus_capucinus
ENSAMEG00000004812	R3HDM2	100	95.411	ENSCATG00000036929	R3HDM2	100	95.411	Cercocebus_atys
ENSAMEG00000004812	R3HDM2	100	94.084	ENSCLAG00000011997	R3HDM2	100	92.653	Chinchilla_lanigera
ENSAMEG00000004812	R3HDM2	100	95.043	ENSCSAG00000004911	R3HDM2	100	95.043	Chlorocebus_sabaeus
ENSAMEG00000004812	R3HDM2	76	92.016	ENSCHOG00000005636	R3HDM2	91	91.781	Choloepus_hoffmanni
ENSAMEG00000004812	R3HDM2	100	80.019	ENSCPBG00000013922	R3HDM2	100	79.944	Chrysemys_picta_bellii
ENSAMEG00000004812	R3HDM2	100	95.220	ENSCANG00000043807	R3HDM2	100	95.220	Colobus_angolensis_palliatus
ENSAMEG00000004812	R3HDM2	100	93.416	ENSCGRG00001017324	R3hdm2	100	92.462	Cricetulus_griseus_chok1gshd
ENSAMEG00000004812	R3HDM2	100	93.416	ENSCGRG00000003862	R3hdm2	100	92.462	Cricetulus_griseus_crigri
ENSAMEG00000004812	R3HDM2	97	65.881	ENSCSEG00000010925	r3hdm2	96	66.667	Cynoglossus_semilaevis
ENSAMEG00000004812	R3HDM2	99	63.978	ENSCVAG00000009058	r3hdm2	95	67.053	Cyprinodon_variegatus
ENSAMEG00000004812	R3HDM2	93	63.417	ENSDARG00000102610	r3hdm2	99	64.257	Danio_rerio
ENSAMEG00000004812	R3HDM2	100	93.548	ENSDNOG00000015033	R3HDM2	100	95.752	Dasypus_novemcinctus
ENSAMEG00000004812	R3HDM2	95	89.495	ENSDORG00000011462	R3hdm2	99	89.495	Dipodomys_ordii
ENSAMEG00000004812	R3HDM2	100	97.135	ENSEASG00005007091	R3HDM2	100	97.135	Equus_asinus_asinus
ENSAMEG00000004812	R3HDM2	100	97.228	ENSECAG00000003157	R3HDM2	100	97.228	Equus_caballus
ENSAMEG00000004812	R3HDM2	96	64.579	ENSELUG00000015969	r3hdm2	94	65.333	Esox_lucius
ENSAMEG00000004812	R3HDM2	100	97.897	ENSFCAG00000000192	R3HDM2	99	97.563	Felis_catus
ENSAMEG00000004812	R3HDM2	89	81.250	ENSFALG00000000255	R3HDM2	99	75.634	Ficedula_albicollis
ENSAMEG00000004812	R3HDM2	100	93.333	ENSFDAG00000019385	R3HDM2	100	94.095	Fukomys_damarensis
ENSAMEG00000004812	R3HDM2	99	63.010	ENSFHEG00000016484	r3hdm2	95	66.860	Fundulus_heteroclitus
ENSAMEG00000004812	R3HDM2	95	65.978	ENSGMOG00000007961	r3hdm2	95	70.120	Gadus_morhua
ENSAMEG00000004812	R3HDM2	100	78.644	ENSGALG00000043736	R3HDM2	100	78.737	Gallus_gallus
ENSAMEG00000004812	R3HDM2	99	65.193	ENSGAFG00000013887	r3hdm2	95	67.311	Gambusia_affinis
ENSAMEG00000004812	R3HDM2	62	37.160	ENSGAFG00000015558	-	88	35.982	Gambusia_affinis
ENSAMEG00000004812	R3HDM2	95	67.483	ENSGACG00000006442	r3hdm2	100	68.695	Gasterosteus_aculeatus
ENSAMEG00000004812	R3HDM2	100	80.037	ENSGAGG00000017797	R3HDM2	99	79.851	Gopherus_agassizii
ENSAMEG00000004812	R3HDM2	100	95.507	ENSGGOG00000015007	R3HDM2	100	95.507	Gorilla_gorilla
ENSAMEG00000004812	R3HDM2	68	35.880	ENSHBUG00000018525	-	91	34.680	Haplochromis_burtoni
ENSAMEG00000004812	R3HDM2	100	94.174	ENSHGLG00000010434	-	100	93.792	Heterocephalus_glaber_female
ENSAMEG00000004812	R3HDM2	89	82.277	ENSHGLG00000010421	-	97	81.847	Heterocephalus_glaber_female
ENSAMEG00000004812	R3HDM2	96	79.482	ENSHGLG00100018871	-	99	79.084	Heterocephalus_glaber_male
ENSAMEG00000004812	R3HDM2	100	94.078	ENSHGLG00100004183	-	100	93.696	Heterocephalus_glaber_male
ENSAMEG00000004812	R3HDM2	99	62.268	ENSHCOG00000001142	r3hdm2	92	65.324	Hippocampus_comes
ENSAMEG00000004812	R3HDM2	99	61.843	ENSIPUG00000023873	r3hdm2	95	64.176	Ictalurus_punctatus
ENSAMEG00000004812	R3HDM2	100	87.500	ENSSTOG00000013424	R3HDM2	100	86.559	Ictidomys_tridecemlineatus
ENSAMEG00000004812	R3HDM2	100	95.411	ENSJJAG00000010001	R3hdm2	100	94.837	Jaculus_jaculus
ENSAMEG00000004812	R3HDM2	96	66.889	ENSKMAG00000012695	r3hdm2	99	63.925	Kryptolebias_marmoratus
ENSAMEG00000004812	R3HDM2	99	64.620	ENSLBEG00000013115	r3hdm2	92	66.635	Labrus_bergylta
ENSAMEG00000004812	R3HDM2	50	41.155	ENSLBEG00000002779	-	52	48.060	Labrus_bergylta
ENSAMEG00000004812	R3HDM2	95	73.019	ENSLACG00000019064	r3hdm2	100	72.818	Latimeria_chalumnae
ENSAMEG00000004812	R3HDM2	100	67.787	ENSLOCG00000005976	r3hdm2	100	68.004	Lepisosteus_oculatus
ENSAMEG00000004812	R3HDM2	100	94.938	ENSLAFG00000006510	R3HDM2	100	94.460	Loxodonta_africana
ENSAMEG00000004812	R3HDM2	100	95.507	ENSMFAG00000036385	R3HDM2	100	95.507	Macaca_fascicularis
ENSAMEG00000004812	R3HDM2	100	96.845	ENSMMUG00000021789	R3HDM2	100	96.845	Macaca_mulatta
ENSAMEG00000004812	R3HDM2	100	95.415	ENSMNEG00000025314	R3HDM2	100	95.415	Macaca_nemestrina
ENSAMEG00000004812	R3HDM2	100	95.507	ENSMLEG00000028915	R3HDM2	100	95.507	Mandrillus_leucophaeus
ENSAMEG00000004812	R3HDM2	99	63.985	ENSMAMG00000009793	r3hdm2	95	66.699	Mastacembelus_armatus
ENSAMEG00000004812	R3HDM2	99	64.927	ENSMZEG00005007319	r3hdm2	95	67.500	Maylandia_zebra
ENSAMEG00000004812	R3HDM2	100	93.619	ENSMICG00000012389	R3HDM2	100	93.619	Microcebus_murinus
ENSAMEG00000004812	R3HDM2	100	94.264	ENSMOCG00000014425	R3hdm2	100	93.977	Microtus_ochrogaster
ENSAMEG00000004812	R3HDM2	95	63.627	ENSMMOG00000007448	r3hdm2	99	62.290	Mola_mola
ENSAMEG00000004812	R3HDM2	85	70.029	ENSMALG00000010211	r3hdm2	98	57.028	Monopterus_albus
ENSAMEG00000004812	R3HDM2	100	94.466	MGP_CAROLIEiJ_G0015896	R3hdm2	100	93.130	Mus_caroli
ENSAMEG00000004812	R3HDM2	100	94.747	ENSMUSG00000025404	R3hdm2	100	93.505	Mus_musculus
ENSAMEG00000004812	R3HDM2	100	93.595	MGP_PahariEiJ_G0031189	R3hdm2	100	93.212	Mus_pahari
ENSAMEG00000004812	R3HDM2	100	94.376	MGP_SPRETEiJ_G0016722	R3hdm2	100	93.613	Mus_spretus
ENSAMEG00000004812	R3HDM2	98	96.699	ENSMPUG00000001818	R3HDM2	97	96.699	Mustela_putorius_furo
ENSAMEG00000004812	R3HDM2	100	96.463	ENSMLUG00000004980	R3HDM2	100	96.463	Myotis_lucifugus
ENSAMEG00000004812	R3HDM2	100	95.889	ENSNGAG00000018800	R3hdm2	100	95.889	Nannospalax_galili
ENSAMEG00000004812	R3HDM2	94	60.651	ENSNBRG00000004483	r3hdm2	99	62.130	Neolamprologus_brichardi
ENSAMEG00000004812	R3HDM2	100	95.315	ENSNLEG00000017351	R3HDM2	100	95.315	Nomascus_leucogenys
ENSAMEG00000004812	R3HDM2	99	81.966	ENSMEUG00000008588	R3HDM2	100	80.630	Notamacropus_eugenii
ENSAMEG00000004812	R3HDM2	100	83.078	ENSOPRG00000013670	R3HDM2	100	82.983	Ochotona_princeps
ENSAMEG00000004812	R3HDM2	99	62.336	ENSONIG00000005075	r3hdm2	95	65.336	Oreochromis_niloticus
ENSAMEG00000004812	R3HDM2	100	95.338	ENSOCUG00000013258	R3HDM2	100	94.481	Oryctolagus_cuniculus
ENSAMEG00000004812	R3HDM2	99	64.543	ENSORLG00000005502	r3hdm2	95	66.763	Oryzias_latipes
ENSAMEG00000004812	R3HDM2	99	64.543	ENSORLG00020017069	r3hdm2	95	66.763	Oryzias_latipes_hni
ENSAMEG00000004812	R3HDM2	99	64.635	ENSORLG00015012735	r3hdm2	95	66.860	Oryzias_latipes_hsok
ENSAMEG00000004812	R3HDM2	99	57.624	ENSOMEG00000018079	r3hdm2	99	57.728	Oryzias_melastigma
ENSAMEG00000004812	R3HDM2	96	78.833	ENSOGAG00000027966	-	99	75.859	Otolemur_garnettii
ENSAMEG00000004812	R3HDM2	100	93.505	ENSOGAG00000012055	R3HDM2	100	93.505	Otolemur_garnettii
ENSAMEG00000004812	R3HDM2	100	92.256	ENSOARG00000006929	R3HDM2	100	92.256	Ovis_aries
ENSAMEG00000004812	R3HDM2	100	95.602	ENSPPAG00000034395	R3HDM2	100	95.602	Pan_paniscus
ENSAMEG00000004812	R3HDM2	100	94.837	ENSPPRG00000009240	R3HDM2	100	94.837	Panthera_pardus
ENSAMEG00000004812	R3HDM2	100	94.837	ENSPTIG00000008752	R3HDM2	100	94.837	Panthera_tigris_altaica
ENSAMEG00000004812	R3HDM2	100	95.602	ENSPTRG00000046457	R3HDM2	100	95.602	Pan_troglodytes
ENSAMEG00000004812	R3HDM2	98	92.510	ENSPANG00000024002	R3HDM2	100	92.510	Papio_anubis
ENSAMEG00000004812	R3HDM2	99	66.604	ENSPKIG00000003171	r3hdm2	95	68.374	Paramormyrops_kingsleyae
ENSAMEG00000004812	R3HDM2	65	68.321	ENSPSIG00000006954	R3HDM2	100	67.445	Pelodiscus_sinensis
ENSAMEG00000004812	R3HDM2	93	66.061	ENSPMGG00000007061	r3hdm2	99	64.729	Periophthalmus_magnuspinnatus
ENSAMEG00000004812	R3HDM2	100	93.601	ENSPEMG00000015964	R3hdm2	100	92.168	Peromyscus_maniculatus_bairdii
ENSAMEG00000004812	R3HDM2	100	87.786	ENSPCIG00000023841	R3HDM2	100	86.260	Phascolarctos_cinereus
ENSAMEG00000004812	R3HDM2	62	35.821	ENSPFOG00000008096	-	69	41.151	Poecilia_formosa
ENSAMEG00000004812	R3HDM2	95	45.298	ENSPFOG00000006077	r3hdm2	99	45.863	Poecilia_formosa
ENSAMEG00000004812	R3HDM2	62	35.672	ENSPLAG00000006973	-	69	40.938	Poecilia_latipinna
ENSAMEG00000004812	R3HDM2	99	62.878	ENSPLAG00000002971	r3hdm2	95	65.541	Poecilia_latipinna
ENSAMEG00000004812	R3HDM2	62	35.970	ENSPMEG00000014457	-	69	41.365	Poecilia_mexicana
ENSAMEG00000004812	R3HDM2	99	62.878	ENSPMEG00000005330	r3hdm2	95	65.541	Poecilia_mexicana
ENSAMEG00000004812	R3HDM2	99	63.978	ENSPREG00000008424	r3hdm2	95	66.699	Poecilia_reticulata
ENSAMEG00000004812	R3HDM2	98	87.415	ENSPPYG00000004685	R3HDM2	81	86.783	Pongo_abelii
ENSAMEG00000004812	R3HDM2	95	86.176	ENSPCAG00000014642	R3HDM2	100	85.267	Procavia_capensis
ENSAMEG00000004812	R3HDM2	100	93.786	ENSPCOG00000013201	R3HDM2	100	93.786	Propithecus_coquereli
ENSAMEG00000004812	R3HDM2	100	96.845	ENSPVAG00000003967	R3HDM2	100	96.845	Pteropus_vampyrus
ENSAMEG00000004812	R3HDM2	94	61.872	ENSPNYG00000013479	r3hdm2	100	62.439	Pundamilia_nyererei
ENSAMEG00000004812	R3HDM2	99	64.345	ENSPNAG00000017473	r3hdm2	95	66.123	Pygocentrus_nattereri
ENSAMEG00000004812	R3HDM2	100	93.607	ENSRNOG00000007801	R3hdm2	100	93.034	Rattus_norvegicus
ENSAMEG00000004812	R3HDM2	100	91.013	ENSRBIG00000037403	R3HDM2	100	89.293	Rhinopithecus_bieti
ENSAMEG00000004812	R3HDM2	100	96.654	ENSRROG00000022271	R3HDM2	100	95.315	Rhinopithecus_roxellana
ENSAMEG00000004812	R3HDM2	100	93.690	ENSSBOG00000023547	R3HDM2	100	93.690	Saimiri_boliviensis_boliviensis
ENSAMEG00000004812	R3HDM2	100	87.559	ENSSHAG00000003511	R3HDM2	100	87.274	Sarcophilus_harrisii
ENSAMEG00000004812	R3HDM2	94	67.269	ENSSFOG00015011219	r3hdm2	99	66.070	Scleropages_formosus
ENSAMEG00000004812	R3HDM2	99	64.576	ENSSMAG00000012073	r3hdm2	99	65.648	Scophthalmus_maximus
ENSAMEG00000004812	R3HDM2	99	64.679	ENSSDUG00000019269	r3hdm2	95	67.245	Seriola_dumerili
ENSAMEG00000004812	R3HDM2	99	65.993	ENSSLDG00000005252	r3hdm2	95	68.340	Seriola_lalandi_dorsalis
ENSAMEG00000004812	R3HDM2	90	90.459	ENSSARG00000003958	R3HDM2	94	89.908	Sorex_araneus
ENSAMEG00000004812	R3HDM2	100	74.908	ENSSPUG00000014132	R3HDM2	100	74.354	Sphenodon_punctatus
ENSAMEG00000004812	R3HDM2	99	63.952	ENSSPAG00000022594	r3hdm2	100	62.763	Stegastes_partitus
ENSAMEG00000004812	R3HDM2	100	92.830	ENSSSCG00000026498	R3HDM2	100	97.491	Sus_scrofa
ENSAMEG00000004812	R3HDM2	73	80.469	ENSTGUG00000015881	R3HDM2	100	80.052	Taeniopygia_guttata
ENSAMEG00000004812	R3HDM2	95	59.786	ENSTRUG00000015075	r3hdm2	99	60.313	Takifugu_rubripes
ENSAMEG00000004812	R3HDM2	87	82.184	ENSTNIG00000007057	r3hdm2	90	82.184	Tetraodon_nigroviridis
ENSAMEG00000004812	R3HDM2	81	95.745	ENSTBEG00000015967	R3HDM2	81	95.745	Tupaia_belangeri
ENSAMEG00000004812	R3HDM2	100	82.409	ENSTTRG00000013082	R3HDM2	100	81.931	Tursiops_truncatus
ENSAMEG00000004812	R3HDM2	100	97.512	ENSUAMG00000020913	R3HDM2	100	97.512	Ursus_americanus
ENSAMEG00000004812	R3HDM2	100	93.899	ENSUMAG00000019179	R3HDM2	100	93.899	Ursus_maritimus
ENSAMEG00000004812	R3HDM2	100	91.013	ENSVPAG00000008656	R3HDM2	100	91.013	Vicugna_pacos
ENSAMEG00000004812	R3HDM2	98	98.053	ENSVVUG00000018014	R3HDM2	97	98.053	Vulpes_vulpes
ENSAMEG00000004812	R3HDM2	100	74.053	ENSXETG00000017153	r3hdm2	100	72.727	Xenopus_tropicalis
ENSAMEG00000004812	R3HDM2	87	58.991	ENSXCOG00000013882	r3hdm2	100	59.895	Xiphophorus_couchianus
ENSAMEG00000004812	R3HDM2	62	36.567	ENSXMAG00000002994	-	88	35.832	Xiphophorus_maculatus
ENSAMEG00000004812	R3HDM2	99	64.338	ENSXMAG00000017978	r3hdm2	95	66.988	Xiphophorus_maculatus