EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000005220 (Gene tree)
Gene ID: 100478679
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 37256 bases
Position: chrGL193045.1:929283-966538
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000005530	ResIII	PF04851.15	3e-09	1	1
ENSAMEP00000005529	ResIII	PF04851.15	3.2e-09	1	1
ENSAMEP00000005530	DEAD	PF00270.29	1.2e-06	1	1
ENSAMEP00000005529	DEAD	PF00270.29	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000005756	-	3486	-	ENSAMEP00000005530	1161 (aa)	-	G1LF43
ENSAMET00000005755	-	3549	-	ENSAMEP00000005529	1182 (aa)	-	G1LF42

Gene Model

Click here to download ENSAMEG00000005220's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml04918	Thyroid hormone synthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005220	-	63	35.817	WBGene00020742	T23H2.3	74	35.798	Caenorhabditis_elegans
ENSAMEG00000005220	-	100	67.124	ENSCPOG00000000605	-	100	66.609	Cavia_porcellus
ENSAMEG00000005220	-	85	72.239	ENSCATG00000032574	-	100	71.940	Cercocebus_atys
ENSAMEG00000005220	-	85	72.338	ENSCSAG00000001699	-	100	71.741	Chlorocebus_sabaeus
ENSAMEG00000005220	-	99	67.181	ENSDNOG00000018667	-	99	67.524	Dasypus_novemcinctus
ENSAMEG00000005220	-	84	52.339	ENSFALG00000005755	-	95	51.852	Ficedula_albicollis
ENSAMEG00000005220	-	99	47.236	ENSLACG00000014714	-	65	57.778	Latimeria_chalumnae
ENSAMEG00000005220	-	100	72.820	ENSMFAG00000042516	-	100	72.566	Macaca_fascicularis
ENSAMEG00000005220	-	100	72.820	ENSMMUG00000016905	-	100	72.566	Macaca_mulatta
ENSAMEG00000005220	-	100	73.362	ENSMICG00000009715	-	100	72.851	Microcebus_murinus
ENSAMEG00000005220	-	96	44.550	ENSORLG00000012855	-	100	45.250	Oryzias_latipes
ENSAMEG00000005220	-	100	82.459	ENSPPRG00000002352	-	100	82.459	Panthera_pardus
ENSAMEG00000005220	-	100	72.766	ENSPANG00000012432	-	100	72.511	Papio_anubis
ENSAMEG00000005220	-	100	46.706	ENSPKIG00000011691	-	100	46.473	Paramormyrops_kingsleyae
ENSAMEG00000005220	-	100	65.520	ENSPEMG00000010451	-	100	65.520	Peromyscus_maniculatus_bairdii
ENSAMEG00000005220	-	72	76.471	ENSRNOG00000057761	Ttf2	72	77.586	Rattus_norvegicus
ENSAMEG00000005220	-	100	51.403	ENSTGUG00000013438	-	100	50.990	Taeniopygia_guttata
ENSAMEG00000005220	-	100	89.664	ENSUAMG00000026131	-	100	89.664	Ursus_americanus
ENSAMEG00000005220	-	100	94.918	ENSUMAG00000004514	-	100	94.918	Ursus_maritimus
ENSAMEG00000005220	-	100	84.437	ENSVVUG00000010407	-	100	84.437	Vulpes_vulpes