EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000005222 (Gene tree)
Gene ID: 100471042
Gene Symbol: POLR3F
Alias: RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 11037 bases
Position: chrGL193309.1:748600-759636
Accession: 100471042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000005527	RNA_pol_Rpc34	PF05158.12	4e-106	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000005753	POLR3F-201	951	-	ENSAMEP00000005527	316 (aa)	XP_002925671	G1LF40

Gene Model

Click here to download ENSAMEG00000005222's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03020	RNA polymerase	KEGG
aml04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005222	POLR3F	100	99.684	ENSG00000132664	POLR3F	100	99.684	Homo_sapiens
ENSAMEG00000005222	POLR3F	100	85.443	ENSAPOG00000008271	polr3f	100	85.443	Acanthochromis_polyacanthus
ENSAMEG00000005222	POLR3F	100	80.380	ENSACIG00000006705	polr3f	100	80.380	Amphilophus_citrinellus
ENSAMEG00000005222	POLR3F	100	86.076	ENSAOCG00000000687	polr3f	100	86.076	Amphiprion_ocellaris
ENSAMEG00000005222	POLR3F	100	85.759	ENSAPEG00000015263	polr3f	100	85.759	Amphiprion_percula
ENSAMEG00000005222	POLR3F	87	89.091	ENSATEG00000015539	polr3f	100	89.091	Anabas_testudineus
ENSAMEG00000005222	POLR3F	87	94.909	ENSAPLG00000005533	POLR3F	100	94.909	Anas_platyrhynchos
ENSAMEG00000005222	POLR3F	96	93.399	ENSACAG00000014293	POLR3F	98	93.399	Anolis_carolinensis
ENSAMEG00000005222	POLR3F	100	99.367	ENSANAG00000026726	POLR3F	100	99.367	Aotus_nancymaae
ENSAMEG00000005222	POLR3F	100	86.709	ENSACLG00000003615	polr3f	100	86.709	Astatotilapia_calliptera
ENSAMEG00000005222	POLR3F	100	87.342	ENSAMXG00000036020	polr3f	100	87.342	Astyanax_mexicanus
ENSAMEG00000005222	POLR3F	100	99.684	ENSBTAG00000008825	POLR3F	100	99.684	Bos_taurus
ENSAMEG00000005222	POLR3F	94	33.445	WBGene00021112	W09C3.4	95	33.445	Caenorhabditis_elegans
ENSAMEG00000005222	POLR3F	100	99.367	ENSCJAG00000005159	POLR3F	100	99.367	Callithrix_jacchus
ENSAMEG00000005222	POLR3F	100	99.684	ENSCAFG00000005420	POLR3F	100	99.684	Canis_familiaris
ENSAMEG00000005222	POLR3F	100	99.684	ENSCAFG00020027500	POLR3F	100	99.684	Canis_lupus_dingo
ENSAMEG00000005222	POLR3F	100	99.684	ENSCHIG00000014743	POLR3F	100	99.684	Capra_hircus
ENSAMEG00000005222	POLR3F	100	99.367	ENSTSYG00000004207	POLR3F	100	99.367	Carlito_syrichta
ENSAMEG00000005222	POLR3F	93	56.081	ENSCAPG00000008423	POLR3F	100	56.081	Cavia_aperea
ENSAMEG00000005222	POLR3F	100	98.101	ENSCPOG00000002400	POLR3F	100	98.101	Cavia_porcellus
ENSAMEG00000005222	POLR3F	100	88.608	ENSCCAG00000021800	POLR3F	100	88.608	Cebus_capucinus
ENSAMEG00000005222	POLR3F	100	99.367	ENSCATG00000019507	POLR3F	100	99.367	Cercocebus_atys
ENSAMEG00000005222	POLR3F	100	98.734	ENSCLAG00000016296	POLR3F	100	98.734	Chinchilla_lanigera
ENSAMEG00000005222	POLR3F	100	99.367	ENSCSAG00000011513	POLR3F	100	99.367	Chlorocebus_sabaeus
ENSAMEG00000005222	POLR3F	73	98.876	ENSCHOG00000013268	POLR3F	73	98.876	Choloepus_hoffmanni
ENSAMEG00000005222	POLR3F	87	94.909	ENSCPBG00000023473	POLR3F	100	94.909	Chrysemys_picta_bellii
ENSAMEG00000005222	POLR3F	99	60.952	ENSCING00000001212	-	99	60.952	Ciona_intestinalis
ENSAMEG00000005222	POLR3F	70	59.193	ENSCSAVG00000003340	-	96	66.272	Ciona_savignyi
ENSAMEG00000005222	POLR3F	92	99.313	ENSCANG00000037390	POLR3F	100	99.313	Colobus_angolensis_palliatus
ENSAMEG00000005222	POLR3F	100	99.051	ENSCGRG00001002032	Polr3f	100	99.051	Cricetulus_griseus_chok1gshd
ENSAMEG00000005222	POLR3F	100	99.051	ENSCGRG00000010852	Polr3f	100	99.051	Cricetulus_griseus_crigri
ENSAMEG00000005222	POLR3F	100	84.494	ENSCSEG00000001247	polr3f	100	84.494	Cynoglossus_semilaevis
ENSAMEG00000005222	POLR3F	100	85.443	ENSCVAG00000007611	polr3f	100	85.443	Cyprinodon_variegatus
ENSAMEG00000005222	POLR3F	100	88.291	ENSDARG00000012572	polr3f	100	88.291	Danio_rerio
ENSAMEG00000005222	POLR3F	100	96.835	ENSDNOG00000010719	POLR3F	100	96.835	Dasypus_novemcinctus
ENSAMEG00000005222	POLR3F	100	99.051	ENSDORG00000016352	Polr3f	100	99.051	Dipodomys_ordii
ENSAMEG00000005222	POLR3F	95	49.667	FBgn0038951	CG5380	99	49.667	Drosophila_melanogaster
ENSAMEG00000005222	POLR3F	89	60.854	ENSETEG00000015485	-	100	60.854	Echinops_telfairi
ENSAMEG00000005222	POLR3F	96	77.228	ENSEBUG00000006783	polr3f	97	77.228	Eptatretus_burgeri
ENSAMEG00000005222	POLR3F	100	99.684	ENSEASG00005002022	POLR3F	100	99.684	Equus_asinus_asinus
ENSAMEG00000005222	POLR3F	100	99.684	ENSECAG00000009920	POLR3F	100	99.684	Equus_caballus
ENSAMEG00000005222	POLR3F	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSAMEG00000005222	POLR3F	100	88.924	ENSELUG00000001558	polr3f	100	88.924	Esox_lucius
ENSAMEG00000005222	POLR3F	100	100.000	ENSFCAG00000013828	POLR3F	100	100.000	Felis_catus
ENSAMEG00000005222	POLR3F	87	95.273	ENSFALG00000007623	POLR3F	100	95.273	Ficedula_albicollis
ENSAMEG00000005222	POLR3F	100	98.418	ENSFDAG00000002528	POLR3F	100	98.418	Fukomys_damarensis
ENSAMEG00000005222	POLR3F	100	82.911	ENSFHEG00000006450	polr3f	100	82.911	Fundulus_heteroclitus
ENSAMEG00000005222	POLR3F	100	93.671	ENSGALG00000008749	POLR3F	100	93.671	Gallus_gallus
ENSAMEG00000005222	POLR3F	100	84.494	ENSGAFG00000003698	polr3f	100	84.494	Gambusia_affinis
ENSAMEG00000005222	POLR3F	100	93.671	ENSGAGG00000006151	POLR3F	100	93.671	Gopherus_agassizii
ENSAMEG00000005222	POLR3F	100	99.684	ENSGGOG00000011543	POLR3F	100	99.684	Gorilla_gorilla
ENSAMEG00000005222	POLR3F	100	87.025	ENSHBUG00000013806	polr3f	100	87.025	Haplochromis_burtoni
ENSAMEG00000005222	POLR3F	100	98.101	ENSHGLG00000011867	POLR3F	100	98.101	Heterocephalus_glaber_female
ENSAMEG00000005222	POLR3F	100	98.101	ENSHGLG00100012577	POLR3F	100	98.101	Heterocephalus_glaber_male
ENSAMEG00000005222	POLR3F	100	76.899	ENSHCOG00000011751	polr3f	100	76.899	Hippocampus_comes
ENSAMEG00000005222	POLR3F	98	87.460	ENSIPUG00000013347	polr3f	99	87.460	Ictalurus_punctatus
ENSAMEG00000005222	POLR3F	100	100.000	ENSSTOG00000013588	POLR3F	100	100.000	Ictidomys_tridecemlineatus
ENSAMEG00000005222	POLR3F	100	99.367	ENSJJAG00000017513	Polr3f	100	99.367	Jaculus_jaculus
ENSAMEG00000005222	POLR3F	87	81.455	ENSKMAG00000016495	polr3f	100	81.455	Kryptolebias_marmoratus
ENSAMEG00000005222	POLR3F	73	91.810	ENSLBEG00000011998	polr3f	100	91.810	Labrus_bergylta
ENSAMEG00000005222	POLR3F	100	90.190	ENSLACG00000009371	POLR3F	100	90.190	Latimeria_chalumnae
ENSAMEG00000005222	POLR3F	100	89.873	ENSLOCG00000015701	polr3f	100	89.873	Lepisosteus_oculatus
ENSAMEG00000005222	POLR3F	100	99.367	ENSLAFG00000004929	POLR3F	100	99.367	Loxodonta_africana
ENSAMEG00000005222	POLR3F	100	99.367	ENSMFAG00000002227	POLR3F	100	99.367	Macaca_fascicularis
ENSAMEG00000005222	POLR3F	87	99.273	ENSMMUG00000004143	POLR3F	100	99.273	Macaca_mulatta
ENSAMEG00000005222	POLR3F	100	99.367	ENSMNEG00000033404	POLR3F	100	99.367	Macaca_nemestrina
ENSAMEG00000005222	POLR3F	100	99.367	ENSMLEG00000021905	POLR3F	100	99.367	Mandrillus_leucophaeus
ENSAMEG00000005222	POLR3F	100	86.076	ENSMAMG00000017975	polr3f	100	86.076	Mastacembelus_armatus
ENSAMEG00000005222	POLR3F	100	87.025	ENSMZEG00005015134	polr3f	100	87.025	Maylandia_zebra
ENSAMEG00000005222	POLR3F	100	93.354	ENSMGAG00000006691	POLR3F	100	93.354	Meleagris_gallopavo
ENSAMEG00000005222	POLR3F	100	99.367	ENSMAUG00000020176	Polr3f	100	99.367	Mesocricetus_auratus
ENSAMEG00000005222	POLR3F	100	99.367	ENSMICG00000044519	POLR3F	100	99.367	Microcebus_murinus
ENSAMEG00000005222	POLR3F	100	99.051	ENSMOCG00000018352	Polr3f	100	99.051	Microtus_ochrogaster
ENSAMEG00000005222	POLR3F	93	87.879	ENSMMOG00000018477	polr3f	100	87.879	Mola_mola
ENSAMEG00000005222	POLR3F	100	97.785	ENSMODG00000005624	POLR3F	100	97.785	Monodelphis_domestica
ENSAMEG00000005222	POLR3F	100	87.025	ENSMALG00000006685	polr3f	100	87.025	Monopterus_albus
ENSAMEG00000005222	POLR3F	100	98.418	MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	Mus_caroli
ENSAMEG00000005222	POLR3F	100	98.418	ENSMUSG00000027427	Polr3f	100	98.418	Mus_musculus
ENSAMEG00000005222	POLR3F	100	98.418	MGP_PahariEiJ_G0025829	Polr3f	100	98.418	Mus_pahari
ENSAMEG00000005222	POLR3F	100	98.418	MGP_SPRETEiJ_G0025304	Polr3f	100	98.418	Mus_spretus
ENSAMEG00000005222	POLR3F	100	77.538	ENSMPUG00000001252	-	100	77.538	Mustela_putorius_furo
ENSAMEG00000005222	POLR3F	100	99.684	ENSMLUG00000014844	POLR3F	100	99.684	Myotis_lucifugus
ENSAMEG00000005222	POLR3F	100	98.734	ENSNGAG00000010898	Polr3f	100	98.734	Nannospalax_galili
ENSAMEG00000005222	POLR3F	100	87.342	ENSNBRG00000020796	polr3f	100	87.342	Neolamprologus_brichardi
ENSAMEG00000005222	POLR3F	100	99.684	ENSNLEG00000009778	POLR3F	100	99.684	Nomascus_leucogenys
ENSAMEG00000005222	POLR3F	93	91.525	ENSMEUG00000010320	POLR3F	100	91.525	Notamacropus_eugenii
ENSAMEG00000005222	POLR3F	100	96.519	ENSOPRG00000003385	POLR3F	100	96.519	Ochotona_princeps
ENSAMEG00000005222	POLR3F	100	98.418	ENSODEG00000011521	POLR3F	100	98.418	Octodon_degus
ENSAMEG00000005222	POLR3F	100	85.759	ENSONIG00000006858	polr3f	100	85.759	Oreochromis_niloticus
ENSAMEG00000005222	POLR3F	100	96.519	ENSOANG00000001253	POLR3F	100	96.519	Ornithorhynchus_anatinus
ENSAMEG00000005222	POLR3F	100	99.051	ENSOCUG00000015067	POLR3F	100	99.051	Oryctolagus_cuniculus
ENSAMEG00000005222	POLR3F	100	84.810	ENSORLG00000022412	polr3f	100	84.810	Oryzias_latipes
ENSAMEG00000005222	POLR3F	100	84.810	ENSORLG00020021944	polr3f	100	84.810	Oryzias_latipes_hni
ENSAMEG00000005222	POLR3F	100	98.418	ENSOGAG00000002916	POLR3F	100	98.418	Otolemur_garnettii
ENSAMEG00000005222	POLR3F	100	99.684	ENSOARG00000000315	-	100	99.684	Ovis_aries
ENSAMEG00000005222	POLR3F	100	62.975	ENSOARG00000008647	-	100	62.975	Ovis_aries
ENSAMEG00000005222	POLR3F	100	99.684	ENSPPAG00000036681	POLR3F	100	99.684	Pan_paniscus
ENSAMEG00000005222	POLR3F	100	100.000	ENSPPRG00000024604	POLR3F	100	100.000	Panthera_pardus
ENSAMEG00000005222	POLR3F	100	100.000	ENSPTIG00000020292	POLR3F	100	100.000	Panthera_tigris_altaica
ENSAMEG00000005222	POLR3F	100	99.684	ENSPTRG00000013287	POLR3F	100	99.684	Pan_troglodytes
ENSAMEG00000005222	POLR3F	100	99.367	ENSPANG00000025015	POLR3F	100	99.367	Papio_anubis
ENSAMEG00000005222	POLR3F	100	87.975	ENSPKIG00000004427	polr3f	100	87.975	Paramormyrops_kingsleyae
ENSAMEG00000005222	POLR3F	87	96.000	ENSPSIG00000016613	POLR3F	100	96.000	Pelodiscus_sinensis
ENSAMEG00000005222	POLR3F	100	53.292	ENSPMGG00000018350	polr3f	100	56.329	Periophthalmus_magnuspinnatus
ENSAMEG00000005222	POLR3F	100	99.367	ENSPEMG00000006966	Polr3f	100	99.367	Peromyscus_maniculatus_bairdii
ENSAMEG00000005222	POLR3F	100	80.063	ENSPMAG00000005530	polr3f	100	80.063	Petromyzon_marinus
ENSAMEG00000005222	POLR3F	100	98.101	ENSPCIG00000000908	POLR3F	85	98.101	Phascolarctos_cinereus
ENSAMEG00000005222	POLR3F	100	84.494	ENSPFOG00000018334	polr3f	100	84.494	Poecilia_formosa
ENSAMEG00000005222	POLR3F	100	84.494	ENSPLAG00000021803	polr3f	100	84.494	Poecilia_latipinna
ENSAMEG00000005222	POLR3F	100	84.494	ENSPMEG00000013150	polr3f	100	84.494	Poecilia_mexicana
ENSAMEG00000005222	POLR3F	100	84.494	ENSPREG00000005278	polr3f	100	84.494	Poecilia_reticulata
ENSAMEG00000005222	POLR3F	100	99.684	ENSPPYG00000010737	POLR3F	100	99.684	Pongo_abelii
ENSAMEG00000005222	POLR3F	66	99.324	ENSPCAG00000004893	POLR3F	71	99.324	Procavia_capensis
ENSAMEG00000005222	POLR3F	100	99.367	ENSPCOG00000004543	POLR3F	100	99.367	Propithecus_coquereli
ENSAMEG00000005222	POLR3F	100	99.684	ENSPVAG00000000403	POLR3F	100	99.684	Pteropus_vampyrus
ENSAMEG00000005222	POLR3F	100	87.025	ENSPNYG00000016276	polr3f	100	87.025	Pundamilia_nyererei
ENSAMEG00000005222	POLR3F	100	87.975	ENSPNAG00000005164	polr3f	100	87.975	Pygocentrus_nattereri
ENSAMEG00000005222	POLR3F	100	98.734	ENSRNOG00000007548	Polr3f	85	98.734	Rattus_norvegicus
ENSAMEG00000005222	POLR3F	100	99.367	ENSRBIG00000021268	POLR3F	100	99.367	Rhinopithecus_bieti
ENSAMEG00000005222	POLR3F	100	99.367	ENSRROG00000039911	POLR3F	100	99.367	Rhinopithecus_roxellana
ENSAMEG00000005222	POLR3F	100	99.367	ENSSBOG00000018207	POLR3F	100	99.367	Saimiri_boliviensis_boliviensis
ENSAMEG00000005222	POLR3F	100	77.287	ENSSHAG00000018160	POLR3F	100	76.341	Sarcophilus_harrisii
ENSAMEG00000005222	POLR3F	100	89.241	ENSSFOG00015022433	polr3f	100	89.241	Scleropages_formosus
ENSAMEG00000005222	POLR3F	100	85.443	ENSSMAG00000021029	polr3f	100	85.443	Scophthalmus_maximus
ENSAMEG00000005222	POLR3F	100	77.532	ENSSDUG00000022435	polr3f	100	77.532	Seriola_dumerili
ENSAMEG00000005222	POLR3F	100	86.709	ENSSLDG00000012761	polr3f	100	86.709	Seriola_lalandi_dorsalis
ENSAMEG00000005222	POLR3F	100	89.873	ENSSARG00000006039	POLR3F	100	89.873	Sorex_araneus
ENSAMEG00000005222	POLR3F	100	94.304	ENSSPUG00000001873	POLR3F	100	94.304	Sphenodon_punctatus
ENSAMEG00000005222	POLR3F	100	78.481	ENSSPAG00000002092	polr3f	100	78.481	Stegastes_partitus
ENSAMEG00000005222	POLR3F	100	99.367	ENSSSCG00000007095	POLR3F	100	99.367	Sus_scrofa
ENSAMEG00000005222	POLR3F	100	93.038	ENSTGUG00000005839	POLR3F	100	93.038	Taeniopygia_guttata
ENSAMEG00000005222	POLR3F	100	84.810	ENSTRUG00000012101	polr3f	100	84.810	Takifugu_rubripes
ENSAMEG00000005222	POLR3F	100	83.544	ENSTNIG00000006456	polr3f	100	83.544	Tetraodon_nigroviridis
ENSAMEG00000005222	POLR3F	100	82.911	ENSTBEG00000007921	POLR3F	100	82.911	Tupaia_belangeri
ENSAMEG00000005222	POLR3F	100	99.684	ENSTTRG00000002580	POLR3F	100	99.684	Tursiops_truncatus
ENSAMEG00000005222	POLR3F	53	99.398	ENSUAMG00000024166	POLR3F	100	99.398	Ursus_americanus
ENSAMEG00000005222	POLR3F	100	99.684	ENSUMAG00000024944	POLR3F	100	99.684	Ursus_maritimus
ENSAMEG00000005222	POLR3F	100	99.051	ENSVPAG00000009063	POLR3F	100	99.051	Vicugna_pacos
ENSAMEG00000005222	POLR3F	100	99.684	ENSVVUG00000012925	POLR3F	100	99.684	Vulpes_vulpes
ENSAMEG00000005222	POLR3F	100	89.557	ENSXETG00000024898	polr3f	100	89.557	Xenopus_tropicalis
ENSAMEG00000005222	POLR3F	87	86.909	ENSXCOG00000010301	polr3f	100	86.909	Xiphophorus_couchianus
ENSAMEG00000005222	POLR3F	100	84.810	ENSXMAG00000004604	polr3f	100	84.810	Xiphophorus_maculatus